Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 7.3e-262 906.7 475 100.0
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 3.9e-130 469.2 408 63.7
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 9.3e-92 341.7 478 39.3
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 2.5e-76 290.4 453 35.5
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-69 267.7 470 32.8
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 6.7e-66 255.8 381 37.3
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-61 241.5 398 35.9
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-61 240.4 487 31.2
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-61 240.0 482 31.3
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 8.5e-61 238.8 433 33.3
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-60 237.7 480 32.5
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 9.4e-60 235.3 400 35.2
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-58 230.7 399 34.6
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-57 228.0 476 31.5
SGA_v2.0_scaffold33G13376 Striga asiatica HOM05D006612 ORTHO05D009014 5.3e-55 219.5 130 80.8
SGA_v2.0_scaffold33G13377 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-53 214.5 146 76.0
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-51 208.4 365 32.9
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 3.0e-50 203.8 349 32.1
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-50 203.4 468 29.3
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 6.7e-50 202.6 468 29.5
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 2.8e-48 197.2 403 31.3
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-47 194.9 435 31.3
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 1.8e-47 194.5 411 28.7
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-47 194.1 397 31.7
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 7.0e-47 192.6 331 34.4
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 7.7e-46 189.1 400 31.8
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-44 184.5 237 41.4
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.5e-44 184.1 435 30.1
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 9.4e-44 182.2 258 38.4
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-41 174.1 381 29.1
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-41 174.1 385 32.7
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 5.7e-41 172.9 539 26.0
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 2.8e-40 170.6 355 28.7
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-39 167.5 254 33.9
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 5.9e-38 162.9 476 28.2
SGA_v2.0_scaffold1G00633 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-37 161.4 279 33.0
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 5.0e-37 159.8 337 31.5
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 9.5e-36 155.6 473 28.5
SGA_v2.0_scaffold87G27099 Striga asiatica HOM05D031284 ORTHO05D009014 3.0e-34 150.6 215 34.4
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 6.3e-32 142.9 300 30.7
SGA_v2.0_scaffold106G30692 Striga asiatica HOM05D006612 ORTHO05D009014 5.4e-31 139.8 93 66.7
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 9.2e-31 139.0 178 37.1
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-30 138.7 298 31.9
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-30 137.9 396 28.8
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-30 137.5 282 31.2
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 4.5e-30 136.7 143 45.5
SGA_v2.0_scaffold24G10704 Striga asiatica HOM05D021043 ORTHO05D009014 7.3e-28 129.4 183 37.7
SGA_v2.0_scaffold32G13336 Striga asiatica HOM05D021043 ORTHO05D009014 7.3e-28 129.4 183 37.7
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-27 126.7 286 31.8
SGA_v2.0_scaffold53G19313 Striga asiatica HOM05D021043 ORTHO05D009014 6.1e-27 126.3 182 37.4
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 3.0e-26 124.0 292 29.5
Cc09_g02240 Coffea canephora HOM05D006612 ORTHO05D009014 1.5e-25 121.7 145 41.4
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 4.4e-25 120.2 336 26.2
SGA_v2.0_scaffold144G35921 Striga asiatica HOM05D006612 ORTHO05D009014 5.8e-25 119.8 130 45.4
SGA_v2.0_scaffold135G34887 Striga asiatica HOM05D006612 ORTHO05D009014 7.5e-25 119.4 180 34.4
SGA_v2.0_scaffold43G16209 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-24 117.9 187 31.6
Cc02_g03800 Coffea canephora HOM05D006612 ORTHO05D009014 2.4e-23 114.4 249 26.9
Cc08_g06650 Coffea canephora HOM05D006612 ORTHO05D009014 1.0e-21 109.0 196 31.6
SGA_v2.0_scaffold116G32287 Striga asiatica HOM05D006612 ORTHO05D009014 3.0e-21 107.5 181 30.9
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 3.9e-21 107.1 198 32.3
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 5.0e-21 106.7 383 26.4
SGA_v2.0_scaffold144G35923 Striga asiatica HOM05D006612 ORTHO05D009014 8.6e-21 105.9 261 28.0
SGA_v2.0_scaffold14G06973 Striga asiatica HOM05D006612 ORTHO05D009014 3.3e-20 104.0 230 31.3
Cc08_g02920 Coffea canephora HOM05D006612 ORTHO05D009014 7.3e-20 102.8 124 36.3
Cc11_g04430 Coffea canephora HOM05D006612 ORTHO05D009014 9.5e-20 102.4 144 40.3
SGA_v2.0_scaffold4G02280 Striga asiatica HOM05D021043 ORTHO05D009014 1.6e-19 101.7 183 33.3
SGA_v2.0_scaffold52G19153 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-19 101.7 335 24.5
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-18 99.0 320 25.3
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.8e-18 98.2 449 23.6
SGA_v2.0_scaffold122G33346 Striga asiatica HOM05D031284 ORTHO05D009014 3.1e-18 97.4 180 28.9
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 3.1e-18 97.4 351 24.2
Oeu027742.1 Olea europaea HOM05D008860 ORTHO05D010619 4.0e-18 97.1 283 25.4
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.2e-18 96.7 231 29.0
SGA_v2.0_scaffold146G36211 Striga asiatica HOM05D006612 ORTHO05D009014 6.8e-18 96.3 100 45.0
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 1.2e-17 95.5 365 20.8
SGA_v2.0_scaffold19G08855 Striga asiatica HOM05D006612 ORTHO05D009014 7.5e-17 92.8 141 36.2
SGA_v2.0_scaffold41G15809 Striga asiatica HOM05D006612 ORTHO05D009014 9.8e-17 92.4 283 29.0
Cc11_g04420 Coffea canephora HOM05D006612 ORTHO05D009014 3.7e-16 90.5 110 37.3
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 4.9e-16 90.1 426 22.5
SGA_v2.0_scaffold134G34706 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-15 89.0 140 37.1
SGA_v2.0_scaffold107G30792 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-15 88.6 212 31.1
Sopen02g008580 Solanum pennellii HOM05D002261 ORTHO05D002334 7.8e-14 82.8 310 27.1
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.0e-13 82.4 301 25.2
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 1.3e-13 82.0 390 22.1
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 1.7e-13 81.6 390 21.8
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 3.9e-13 80.5 168 26.2
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 5.1e-13 80.1 390 21.8
Nitab4.5_0001280g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-12 79.0 313 23.3
Oeu030897.1 Olea europaea HOM05D008860 ORTHO05D010619 3.3e-12 77.4 169 31.4
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 3.3e-12 77.4 173 30.1
SGA_v2.0_scaffold28G11832 Striga asiatica HOM05D006612 ORTHO05D009014 9.5e-12 75.9 141 32.6
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.8e-11 74.3 130 33.8
SGA_v2.0_scaffold158G37500 Striga asiatica HOM05D006612 ORTHO05D009014 2.8e-11 74.3 114 37.7
Cc00_g35160 Coffea canephora HOM05D006612 ORTHO05D009014 3.6e-11 73.9 151 31.1
Cc02_g21340 Coffea canephora HOM05D006612 ORTHO05D009014 1.4e-10 72.0 112 35.7
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.4e-10 72.0 157 24.8
Haze_01485 Corylus avellana HOM05D006612 ORTHO05D010384 1.8e-10 71.6 160 28.1
SGA_v2.0_scaffold132G34534 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-10 70.9 157 28.7
Lsat_1_v5_gn_8_167080 Lactuca sativa HOM05D006612 ORTHO05D009014 5.2e-10 70.1 99 36.4
CSS0028456 Camellia sinensis var. sinensis HOM05D002261 ORTHO05D002334 6.8e-10 69.7 266 27.4
Sopen04g022620 Solanum pennellii HOM05D002261 ORTHO05D002334 8.9e-10 69.3 258 24.8
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.2e-09 68.9 94 36.2
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 1.2e-09 68.9 203 24.6
Nitab4.5_0000015g0360 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-09 68.9 324 21.3
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 2.0e-09 68.2 309 21.7
Cc03_g10290 Coffea canephora HOM05D006612 ORTHO05D009014 2.0e-09 68.2 105 33.3
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.6e-09 67.8 120 36.7
SGA_v2.0_scaffold3598G54367 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-09 67.8 112 31.2
Oeu058530.1 Olea europaea HOM05D008860 ORTHO05D010619 3.4e-09 67.4 323 24.1
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 4.4e-09 67.0 162 30.9
Nitab4.5_0003349g0060 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.5e-09 66.2 231 25.5
PGSC0003DMG400017531 Solanum tuberosum HOM05D002261 ORTHO05D002334 9.9e-09 65.9 120 36.7
Oeu003462.1 Olea europaea HOM05D008860 ORTHO05D010619 1.3e-08 65.5 144 32.6
Nitab4.5_0009868g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-08 65.1 273 21.2
Nitab4.5_0007046g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.2e-08 64.7 156 26.3
SGA_v2.0_scaffold68G23014 Striga asiatica HOM05D000096 ORTHO05D000045 2.2e-08 64.7 57 43.9
Hma1.2p1_2379F.1_g320940 Hydrangea macrophylla HOM05D009267 ORTHO05D010619 2.9e-08 64.3 112 35.7
Dinv11979 Davidia involucrata HOM05D006612 ORTHO05D009014 3.7e-08 63.9 175 25.7
Oeu057911.1 Olea europaea HOM05D008860 ORTHO05D010619 3.7e-08 63.9 237 25.3
Oeu029240.1 Olea europaea HOM05D008860 ORTHO05D010619 4.9e-08 63.5 294 26.2
SGA_v2.0_scaffold46G17409 Striga asiatica HOM05D021043 ORTHO05D399715 8.3e-08 62.8 123 31.7
CANSAT01G1154 Cannabis sativa HOM05D000824 ORTHO05D010619 1.1e-07 62.4 116 33.6
Nitab4.5_0012917g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-07 62.4 171 24.6
Oeu032902.1 Olea europaea HOM05D008860 ORTHO05D010619 1.9e-07 61.6 253 25.7
CAN.G765.17 Capsicum annuum HOM05D002261 ORTHO05D002334 2.4e-07 61.2 157 23.6
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 3.2e-07 60.8 175 28.0
Oeu039609.1 Olea europaea HOM05D008860 ORTHO05D010619 3.2e-07 60.8 131 32.1
Peaxi162Scf03993g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 4.1e-07 60.5 114 32.5
SGA_v2.0_scaffold330G48902 Striga asiatica HOM05D015626 ORTHO05D019382 7.1e-07 59.7 65 46.2
Cc00_g13000 Coffea canephora HOM05D006612 ORTHO05D009014 9.2e-07 59.3 69 44.9
Dinv06234 Davidia involucrata HOM05D006612 ORTHO05D010384 9.2e-07 59.3 154 26.0
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 9.2e-07 59.3 114 32.5
Nitab4.5_0002141g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-06 58.5 174 24.1
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 2.1e-06 58.2 71 38.0
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 2.1e-06 58.2 118 31.4
CiPaw.01G182600 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.7e-06 57.8 68 36.8
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.7e-06 57.8 99 36.4
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.7e-06 57.8 161 24.2


User provided reference genes

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