Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold181G39677 Striga asiatica HOM05D004304 ORTHO05D005229 6.9e-71 270.4 125 100.0
MSTRG.6645 Avicennia marina HOM05D004304 ORTHO05D005229 2.4e-63 245.4 128 89.8
SGA_v2.0_scaffold73G24513 Striga asiatica HOM05D004304 ORTHO05D005229 4.1e-63 244.6 131 87.8
Actinidia21445 Actinidia chinensis HOM05D004304 ORTHO05D005229 9.1e-63 243.4 124 91.9
MSTRG.14924 Avicennia marina HOM05D004304 ORTHO05D005229 2.0e-62 242.3 127 89.0
Potri.014G165300 Populus trichocarpa HOM05D004304 ORTHO05D005229 2.6e-62 241.9 124 90.3
Manes.12G061000 Manihot esculenta HOM05D004304 ORTHO05D005229 3.4e-62 241.5 124 91.1
Thecc.01G191600 Theobroma cacao HOM05D004304 ORTHO05D005229 3.4e-62 241.5 124 90.3
CSS0042456 Camellia sinensis var. sinensis HOM05D004304 ORTHO05D005229 5.9e-62 240.7 124 90.3
Gohir.A11G149700 Gossypium hirsutum HOM05D004304 ORTHO05D005229 5.9e-62 240.7 124 90.3
Gohir.D11G156380 Gossypium hirsutum HOM05D004304 ORTHO05D005229 5.9e-62 240.7 124 90.3
Gorai.007G166800 Gossypium raimondii HOM05D004304 ORTHO05D005229 5.9e-62 240.7 124 90.3
THA.LOC104819042 Tarenaya hassleriana HOM05D004304 ORTHO05D005229 5.9e-62 240.7 124 91.1
Nitab4.5_0000441g0110 Nicotiana tabacum HOM05D004304 ORTHO05D005229 7.7e-62 240.4 127 89.0
Prupe.3G200700 Prunus persica HOM05D004304 ORTHO05D005229 7.7e-62 240.4 130 88.5
CSS0022075 Camellia sinensis var. sinensis HOM05D004304 ORTHO05D005229 1.0e-61 240.0 124 90.3
CiPaw.03G279300 Carya illinoinensis HOM05D004304 ORTHO05D005229 1.0e-61 240.0 124 90.3
AUR62017517 Chenopodium quinoa HOM05D004304 ORTHO05D005229 1.0e-61 240.0 123 91.1
Ciclev10017178m.g Citrus clementina HOM05D004304 ORTHO05D005229 1.0e-61 240.0 124 90.3
FvH4_6g40920 Fragaria vesca HOM05D004304 ORTHO05D005229 1.3e-61 239.6 128 89.1
FAN05G0096 Fragaria x ananassa HOM05D004304 ORTHO05D005229 1.3e-61 239.6 128 89.1
RcHm_v2.0_Chr2g0156501 Rosa chinensis HOM05D004304 ORTHO05D005229 1.3e-61 239.6 128 89.1
CAN.G854.8 Capsicum annuum HOM05D004304 ORTHO05D005229 1.7e-61 239.2 124 90.3
FAN02G3860 Fragaria x ananassa HOM05D004304 ORTHO05D005229 1.7e-61 239.2 128 89.1
Nitab4.5_0004642g0020 Nicotiana tabacum HOM05D004304 ORTHO05D005229 2.2e-61 238.8 127 88.2
GSVIVG01030050001 Vitis vinifera HOM05D004304 ORTHO05D005229 2.2e-61 238.8 124 90.3
CANSAT64G1042 Cannabis sativa HOM05D004304 ORTHO05D005229 2.9e-61 238.4 124 89.5
Duzib133G1241 Durio zibethinus HOM05D004304 ORTHO05D005229 2.9e-61 238.4 123 90.2
PGR042G2803 Punica granatum HOM05D004304 ORTHO05D005229 2.9e-61 238.4 124 88.7
Dinv07865 Davidia involucrata HOM05D004304 ORTHO05D005229 3.8e-61 238.0 124 89.5
FAN09G2975 Fragaria x ananassa HOM05D004304 ORTHO05D005229 3.8e-61 238.0 128 88.3
Hma1.2p1_0133F.1_g061310 Hydrangea macrophylla HOM05D004304 ORTHO05D005229 3.8e-61 238.0 124 90.3
ClCG02G009350 Citrullus lanatus HOM05D004304 ORTHO05D005229 5.0e-61 237.7 124 90.3
Cc00_g07360 Coffea canephora HOM05D004304 ORTHO05D005229 5.0e-61 237.7 124 89.5
Sed0000663 Sechium edule HOM05D004304 ORTHO05D005229 5.0e-61 237.7 124 90.3
Atru.chr6.3369 Acer truncatum HOM05D004304 ORTHO05D005229 6.5e-61 237.3 124 89.5
Duzib138G0739 Durio zibethinus HOM05D004304 ORTHO05D005229 6.5e-61 237.3 122 90.2
Duzib138G1664 Durio zibethinus HOM05D004304 ORTHO05D005229 6.5e-61 237.3 122 90.2
MD09G1123200 Malus domestica HOM05D004304 ORTHO05D005229 6.5e-61 237.3 124 89.5
MD17G1113700 Malus domestica HOM05D004304 ORTHO05D005229 6.5e-61 237.3 124 89.5
Migut.M00031 Erythranthe guttata HOM05D004304 ORTHO05D005229 8.5e-61 236.9 128 88.3
Sopen07g024320 Solanum pennellii HOM05D004304 ORTHO05D005229 8.5e-61 236.9 124 89.5
PGSC0003DMG400006152 Solanum tuberosum HOM05D004304 ORTHO05D005229 8.5e-61 236.9 124 89.5
FAN14G5814 Fragaria x ananassa HOM05D004304 ORTHO05D005229 1.1e-60 236.5 128 88.3
Sc20g0003970 Simmondsia chinensis HOM05D004304 ORTHO05D005229 1.1e-60 236.5 124 88.7
THA.LOC104826653 Tarenaya hassleriana HOM05D004304 ORTHO05D005229 1.1e-60 236.5 124 90.3
CsaV3_6G009500 Cucumis sativus L. HOM05D004304 ORTHO05D005229 1.4e-60 236.1 124 89.5
Gohir.D07G092500 Gossypium hirsutum HOM05D004304 ORTHO05D005229 1.4e-60 236.1 124 89.5
Gorai.001G099100 Gossypium raimondii HOM05D004304 ORTHO05D005229 1.4e-60 236.1 124 89.5
HanXRQChr03g0075261 Helianthus annuus HOM05D004304 ORTHO05D005229 1.4e-60 236.1 124 87.9
vmacro12102 Vaccinium macrocarpon HOM05D004304 ORTHO05D005229 1.4e-60 236.1 124 87.9
Eucgr.A01049 Eucalyptus grandis HOM05D004304 ORTHO05D005229 1.9e-60 235.7 124 87.9
FvH4_5g30980 Fragaria vesca HOM05D004304 ORTHO05D005229 1.9e-60 235.7 124 88.7
FAN13G0518 Fragaria x ananassa HOM05D004304 ORTHO05D005229 1.9e-60 235.7 124 88.7
FAN18G2534 Fragaria x ananassa HOM05D004304 ORTHO05D005229 1.9e-60 235.7 124 88.7
Gohir.A07G087600 Gossypium hirsutum HOM05D004304 ORTHO05D005229 1.9e-60 235.7 124 88.7
TWI75G1244 Tripterygium wilfordii HOM05D004304 ORTHO05D005229 1.9e-60 235.7 124 89.5
vmacro09397 Vaccinium macrocarpon HOM05D004304 ORTHO05D005229 1.9e-60 235.7 124 87.1
Actinidia07885 Actinidia chinensis HOM05D004304 ORTHO05D005229 2.5e-60 235.3 124 87.9
FAN08G1359 Fragaria x ananassa HOM05D004304 ORTHO05D005229 2.5e-60 235.3 124 88.7
DCAR_019709 Daucus carota HOM05D004304 ORTHO05D005229 3.2e-60 235.0 126 86.5
Oeu012343.5 Olea europaea HOM05D005707 ORTHO05D007276 4.2e-60 234.6 128 84.4
Solyc12g006160.2 Solanum lycopersicum HOM05D004304 ORTHO05D005229 4.2e-60 234.6 124 87.9
Sopen12g002110 Solanum pennellii HOM05D004304 ORTHO05D005229 4.2e-60 234.6 124 87.9
PGSC0003DMG400028823 Solanum tuberosum HOM05D004304 ORTHO05D005229 4.2e-60 234.6 124 87.9
CAN.G294.16 Capsicum annuum HOM05D004304 ORTHO05D005229 5.5e-60 234.2 124 87.9
MELO3C025975.2 Cucumis melo HOM05D004304 ORTHO05D005229 5.5e-60 234.2 124 88.7
TWI18G0278 Tripterygium wilfordii HOM05D004304 ORTHO05D005229 5.5e-60 234.2 124 88.7
Glyma.02G305100 Glycine max HOM05D004304 ORTHO05D005229 2.1e-59 232.3 120 90.8
Medtr5g097240 Medicago truncatula HOM05D004304 ORTHO05D005229 2.1e-59 232.3 120 90.8
Phvul.008G284800 Phaseolus vulgaris HOM05D004304 ORTHO05D005229 2.1e-59 232.3 120 90.8
PGR142G2829 Punica granatum HOM05D004304 ORTHO05D005229 2.7e-59 231.9 120 90.0
Aqoxy1G04225 Aquilegia oxysepala HOM05D004304 ORTHO05D005229 3.6e-59 231.5 123 87.0
RcHm_v2.0_Chr7g0226381 Rosa chinensis HOM05D004304 ORTHO05D005229 3.6e-59 231.5 121 90.1
TPR.G1269 Trifolium pratense HOM05D004304 ORTHO05D005229 3.6e-59 231.5 120 90.0
Nn1g07447 Nelumbo nucifera HOM05D004304 ORTHO05D005229 4.7e-59 231.1 128 82.8
Nitab4.5_0001229g0110 Nicotiana tabacum HOM05D004304 ORTHO05D005229 4.7e-59 231.1 124 87.1
Nitab4.5_0005511g0040 Nicotiana tabacum HOM05D004304 ORTHO05D005229 4.7e-59 231.1 124 87.1
TAR624G1210 Trochodendron aralioides HOM05D004304 ORTHO05D005229 4.7e-59 231.1 125 85.6
Actinidia09779 Actinidia chinensis HOM05D004304 ORTHO05D005229 8.0e-59 230.3 124 86.3
Glyma.14G008300 Glycine max HOM05D004304 ORTHO05D005229 1.0e-58 229.9 120 90.0
Os12g0514600 Oryza sativa ssp. japonica HOM05D004304 ORTHO05D005229 1.0e-58 229.9 128 84.4
TAR627G0777 Trochodendron aralioides HOM05D004304 ORTHO05D005229 1.8e-58 229.2 125 84.8
LjContig00081g0006376 Lotus japonicus HOM05D004304 ORTHO05D005229 3.9e-58 228.0 120 88.3
arahy.Tifrunner.gnm1.ann1.40Z2MJ Arachis hypogaea HOM05D004304 ORTHO05D005229 6.7e-58 227.3 120 88.3
arahy.Tifrunner.gnm1.ann1.F2KZWM Arachis hypogaea HOM05D004304 ORTHO05D005229 6.7e-58 227.3 120 88.3
Gohir.A07G170000 Gossypium hirsutum HOM05D004304 ORTHO05D005229 6.7e-58 227.3 122 86.1
Gohir.D07G171200 Gossypium hirsutum HOM05D004304 ORTHO05D005229 6.7e-58 227.3 122 86.1
Gorai.001G191600 Gossypium raimondii HOM05D004304 ORTHO05D005229 6.7e-58 227.3 122 86.1
Lalb_Chr10g0107601 Lupinus albus HOM05D004304 ORTHO05D005229 8.8e-58 226.9 120 88.3
BcaC09g47944 Brassica carinata HOM05D004304 ORTHO05D005229 2.0e-57 225.7 125 84.8
Zm00001eb137890 Zea mays HOM05D004304 ORTHO05D005229 2.0e-57 225.7 120 85.8
ATR1149G091 Amborella trichopoda HOM05D004304 ORTHO05D005229 2.6e-57 225.3 124 83.1
CiPaw.04G196300 Carya illinoinensis HOM05D004304 ORTHO05D005229 2.6e-57 225.3 122 86.9
BcaB04g21271 Brassica carinata HOM05D004304 ORTHO05D005229 3.3e-57 224.9 125 84.8
BolC1t05535H Brassica oleracea HOM05D004304 ORTHO05D005229 3.3e-57 224.9 125 84.8
BraA01t04365Z Brassica rapa HOM05D004304 ORTHO05D005229 4.4e-57 224.6 125 84.0
CARHR082470 Cardamine hirsuta HOM05D004304 ORTHO05D005229 4.4e-57 224.6 122 86.1
Thhalv10021767m.g Eutrema salsugineum HOM05D004304 ORTHO05D005229 4.4e-57 224.6 122 86.1
PSO210G6619 Papaver somniferum HOM05D004304 ORTHO05D005229 4.4e-57 224.6 124 83.9
Sp3g06690 Schrenkiella parvula HOM05D004304 ORTHO05D005229 4.4e-57 224.6 122 86.1
PSO302G0206 Papaver somniferum HOM05D004304 ORTHO05D005229 5.7e-57 224.2 124 83.1
CDE07G1815 Ceratophyllum demersum HOM05D004304 ORTHO05D005229 7.4e-57 223.8 121 81.0
MSTRG.12237 Avicennia marina HOM05D004304 ORTHO05D005229 9.7e-57 223.4 125 83.2
AL3G19120 Arabidopsis lyrata HOM05D004304 ORTHO05D005229 1.3e-56 223.0 122 85.2
AT3G07760 Arabidopsis thaliana HOM05D004304 ORTHO05D005229 1.3e-56 223.0 122 85.2
Lalb_Chr04g0247321 Lupinus albus HOM05D004304 ORTHO05D005229 1.3e-56 223.0 120 86.7
Lalb_Chr04g0247511 Lupinus albus HOM05D004304 ORTHO05D005229 1.3e-56 223.0 120 86.7
Carub.0003s0734 Capsella rubella HOM05D004304 ORTHO05D005229 1.7e-56 222.6 122 85.2
BcaC05g29569 Brassica carinata HOM05D004304 ORTHO05D005229 2.2e-56 222.2 122 85.2
A05p40460 Brassica napus HOM05D004304 ORTHO05D005229 2.2e-56 222.2 122 85.2
C05p59560 Brassica napus HOM05D004304 ORTHO05D005229 2.2e-56 222.2 122 85.2
BolC5t34611H Brassica oleracea HOM05D004304 ORTHO05D005229 2.2e-56 222.2 122 85.2
BraA05t22779Z Brassica rapa HOM05D004304 ORTHO05D005229 2.2e-56 222.2 122 85.2
Zm00001eb264410 Zea mays HOM05D004304 ORTHO05D005229 2.2e-56 222.2 120 84.2
CDE04G0517 Ceratophyllum demersum HOM05D004304 ORTHO05D005229 2.8e-56 221.9 121 79.3
Zm00001eb166190 Zea mays HOM05D004304 ORTHO05D005229 4.8e-56 221.1 126 81.7
Aa31LG5G18330 Aethionema arabicum HOM05D004304 ORTHO05D005229 6.3e-56 220.7 149 73.2
BcaB03g14683 Brassica carinata HOM05D004304 ORTHO05D005229 2.4e-55 218.8 122 83.6
SEGI_33416 Sequoiadendron giganteum HOM05D004304 ORTHO05D005229 7.0e-55 217.2 122 82.0
TWI36G1037 Tripterygium wilfordii HOM05D004304 ORTHO05D005229 7.0e-55 217.2 155 70.3
HPP92_009568 Vanilla planifolia HOM05D004304 ORTHO05D005229 9.1e-55 216.9 120 81.7
BraA03t12719Z Brassica rapa HOM05D004304 ORTHO05D005229 1.2e-54 216.5 119 84.9
A03p35420 Brassica napus HOM05D004304 ORTHO05D005229 1.6e-54 216.1 119 84.9
Rhsim04G0038800 Rhododendron simsii HOM05D004304 ORTHO05D005229 4.5e-54 214.5 169 64.5
HanXRQChr10g0306431 Helianthus annuus HOM05D004304 ORTHO05D005229 7.7e-54 213.8 122 82.0
ECA240G0131 Erigeron canadensis HOM05D001343 ORTHO05D002008 1.7e-53 212.6 109 89.0
unitig_37.g12596 Utricularia gibba HOM05D004304 ORTHO05D005229 1.7e-53 212.6 138 75.4
SMO147G0193 Selaginella moellendorffii HOM05D004304 ORTHO05D005229 3.2e-52 208.4 120 78.3
Eucgr.K00654 Eucalyptus grandis HOM05D004304 ORTHO05D005229 8.0e-51 203.8 114 84.2
Peaxi162Scf00047g02135 Petunia axillaris HOM05D004304 ORTHO05D005229 1.8e-50 202.6 112 85.7
MBI16_g26392_MAGBIO Magnolia biondii HOM05D004304 ORTHO05D005229 2.3e-50 202.2 114 82.5
SEGI_10863 Sequoiadendron giganteum HOM05D004304 ORTHO05D005229 3.0e-50 201.8 120 73.3
TAR624G0596 Trochodendron aralioides HOM05D004304 ORTHO05D005229 8.8e-50 200.3 109 84.4
THA.LOC109116190 Tarenaya hassleriana HOM05D004304 ORTHO05D005229 9.7e-49 196.8 108 86.1
FAN04G0826 Fragaria x ananassa HOM05D004304 ORTHO05D005229 3.5e-46 188.3 149 65.8
Dinv05830 Davidia involucrata HOM05D004304 ORTHO05D005229 5.2e-42 174.5 92 85.9
Dinv21270 Davidia involucrata HOM05D004304 ORTHO05D005229 2.6e-41 172.2 85 91.8
SalBow7G0104 Salvia bowleyana HOM05D004304 ORTHO05D005229 1.7e-40 169.5 84 94.0
Manes.13G062800 Manihot esculenta HOM05D004304 ORTHO05D005229 3.7e-40 168.3 80 95.0
Sed0023039 Sechium edule HOM05D004304 ORTHO05D005229 8.3e-40 167.2 83 91.6
QL08p028475 Quercus lobata HOM05D004304 ORTHO05D005229 1.4e-39 166.4 80 95.0
CSS0024587 Camellia sinensis var. sinensis HOM05D004304 ORTHO05D005229 1.8e-39 166.0 100 81.0
Lsat_1_v5_gn_9_104560 Lactuca sativa HOM05D004304 ORTHO05D005229 1.8e-39 166.0 122 69.7
DCAR_012907 Daucus carota HOM05D004304 ORTHO05D005229 4.1e-39 164.9 78 94.9
Haze_12682 Corylus avellana HOM05D004304 ORTHO05D005229 9.1e-39 163.7 80 93.8
VMungo0647G2439 Vigna mungo HOM05D004304 ORTHO05D005229 5.9e-38 161.0 76 96.1
BcaC01g04291 Brassica carinata HOM05D000074 ORTHO05D001293 2.9e-37 158.7 126 63.5
Psat2g004600 Pisum sativum HOM05D004304 ORTHO05D005229 2.5e-36 155.6 76 90.8
Sabra14G0125900 Salix brachista HOM05D004304 ORTHO05D005229 3.6e-35 151.8 108 69.4
AUR62015060 Chenopodium quinoa HOM05D004304 ORTHO05D005229 3.0e-34 148.7 123 62.6
FAN04G0834 Fragaria x ananassa HOM05D004304 ORTHO05D005229 4.0e-34 148.3 170 47.6
Oeu040468.1 Olea europaea HOM05D004304 ORTHO05D005229 5.2e-34 147.9 78 89.7
Oeu063643.1 Olea europaea HOM05D004304 ORTHO05D005229 1.5e-33 146.4 78 91.0
unitig_46.g18340 Utricularia gibba HOM05D004304 ORTHO05D005229 4.1e-31 138.3 129 57.4
Cpa.g.c46948 Carica papaya HOM05D004304 ORTHO05D005229 1.6e-30 136.3 64 96.9
DCAR_021105 Daucus carota HOM05D004304 ORTHO05D005229 7.8e-30 134.0 118 58.5
BcaB04g17145 Brassica carinata HOM05D004304 ORTHO05D000003 1.0e-29 133.7 78 80.8
SHI10146 Sapria himalayana HOM05D004304 ORTHO05D005229 1.1e-28 130.2 75 81.3
BcaB01g01337 Brassica carinata HOM05D004304 ORTHO05D005229 1.4e-26 123.2 73 78.1
Hund21536 Selenicereus undatus HOM05D004304 ORTHO05D005229 5.8e-25 117.9 56 94.6
Ah.01g002230 Amaranthus hybridus HOM05D004304 ORTHO05D005229 7.0e-23 110.9 60 85.0
C03p43050 Brassica napus HOM05D004304 ORTHO05D005229 1.6e-22 109.8 115 50.4
BolC3t16573H Brassica oleracea HOM05D004304 ORTHO05D005229 1.6e-22 109.8 115 50.4
BcaB03g16127 Brassica carinata HOM05D004304 ORTHO05D005229 1.1e-20 103.6 59 81.4
Nn1g03242 Nelumbo nucifera HOM05D004304 ORTHO05D005229 5.6e-12 74.7 44 79.5


User provided reference genes

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