Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold17G08157 Striga asiatica HOM05D003057 ORTHO05D003904 2.0e-200 702.2 344 100.0
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 4.5e-128 461.8 419 63.0
SGA_v2.0_scaffold16G07775 Striga asiatica HOM05D003057 ORTHO05D003904 2.0e-88 330.1 373 55.2
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 1.6e-77 293.9 285 52.3
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 1.0e-76 291.2 300 50.0
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 2.9e-71 273.1 360 43.3
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 1.5e-70 270.8 360 43.1
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 1.9e-70 270.4 310 47.7
Rhsim11G0159700 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.3e-70 269.6 246 52.8
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 9.5e-70 268.1 246 52.8
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.6e-69 267.3 246 52.8
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.6e-69 267.3 246 52.8
BcaC04g21929 Brassica carinata HOM05D003057 ORTHO05D003904 6.1e-69 265.4 274 50.4
COL.COLO4_37503 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.4e-67 259.2 264 50.8
BcaC08g45994 Brassica carinata HOM05D003057 ORTHO05D003904 9.8e-67 258.1 277 49.8
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.4e-65 254.2 298 47.3
Rhsim12G0027300 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.2e-65 253.1 255 50.2
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.4e-65 252.3 293 46.1
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 2.0e-64 250.4 244 49.6
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.3e-63 246.9 298 45.6
Rhsim01G0115600 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.0e-63 246.5 247 51.4
RhsimUnG0046200 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.3e-62 242.7 256 48.8
Rhsim11G0020100 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.1e-61 240.4 234 51.3
Rhsim10G0170800 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.8e-61 240.0 256 48.4
RhsimUnG0134200 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.6e-61 239.6 247 49.4
RhsimUnG0227600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.4e-60 237.7 247 49.0
PSO675G7321 Papaver somniferum HOM05D003057 ORTHO05D003904 2.3e-60 236.9 246 50.0
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 3.1e-60 236.5 318 42.8
PSO170G6652 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-59 234.6 246 50.0
COL.COLO4_27567 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.0e-59 233.8 300 42.3
COL.COLO4_20007 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.6e-59 233.4 244 47.5
COL.COLO4_08929 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.5e-59 231.9 244 48.0
Rhsim02G0047600 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.5e-59 231.9 246 47.6
PSO151G0074 Papaver somniferum HOM05D003057 ORTHO05D003904 2.9e-58 229.9 240 46.7
Rhsim03G0157600 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.9e-58 229.9 307 41.7
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.4e-58 228.8 298 44.6
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 6.4e-58 228.8 271 45.4
PSO017G2586 Papaver somniferum HOM05D003057 ORTHO05D003904 1.9e-57 227.3 240 45.4
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 9.2e-57 224.9 255 46.3
PSO384G2563 Papaver somniferum HOM05D003057 ORTHO05D003904 9.2e-57 224.9 247 45.3
Rhsim11G0002500 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.0e-56 223.8 246 46.7
COL.COLO4_37543 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.6e-56 222.6 267 45.3
PSO013G0378 Papaver somniferum HOM05D003057 ORTHO05D003904 6.0e-56 222.2 237 47.3
Rhsim09G0063100 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.3e-55 221.1 245 46.1
PSO761G0317 Papaver somniferum HOM05D003057 ORTHO05D003904 2.3e-55 220.3 254 45.3
COL.COLO4_07828 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.6e-55 218.8 303 40.3
Rhsim02G0188200 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.5e-54 217.6 246 45.5
PSO339G3716 Papaver somniferum HOM05D003057 ORTHO05D003904 4.3e-54 216.1 303 38.9
PSO210G2781 Papaver somniferum HOM05D003057 ORTHO05D003904 5.6e-54 215.7 303 39.9
PSO170G6610 Papaver somniferum HOM05D003057 ORTHO05D003904 7.3e-54 215.3 303 40.3
PSO724G1375 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-53 214.5 303 39.6
Rhsim09G0038900 Rhododendron simsii HOM05D009719 ORTHO05D003904 2.8e-53 213.4 196 53.6
PSO017G6481 Papaver somniferum HOM05D003057 ORTHO05D003904 3.6e-53 213.0 303 39.9
PSO357G0662 Papaver somniferum HOM05D003057 ORTHO05D003904 3.6e-53 213.0 269 43.5
PSO170G5304 Papaver somniferum HOM05D003057 ORTHO05D003904 6.2e-53 212.2 240 45.8
PSO832G2073 Papaver somniferum HOM05D003057 ORTHO05D003904 6.2e-53 212.2 303 40.3
PSO170G1938 Papaver somniferum HOM05D003057 ORTHO05D003904 1.4e-52 211.1 252 42.9
Lj5g0003986 Lotus japonicus HOM05D003057 ORTHO05D003904 1.5e-51 207.6 297 39.7
Rhsim07G0167300 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.6e-51 206.8 196 51.5
Rhsim02G0188400 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.4e-51 206.5 246 43.1
PSO170G6344 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-50 204.5 252 42.1
PSO384G4427 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-50 204.5 252 42.1
Ah.07g202070 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.2e-50 203.8 252 42.1
Ah.07g202550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-49 201.1 265 40.4
PSO761G0015 Papaver somniferum HOM05D003057 ORTHO05D003904 1.4e-49 201.1 232 45.3
Ah.07g196960 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.2e-49 199.9 265 40.4
Ah.03g142690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.4e-49 199.1 265 40.0
PSO675G8645 Papaver somniferum HOM05D003057 ORTHO05D003904 7.1e-49 198.7 213 45.5
PSO198G0152 Papaver somniferum HOM05D003057 ORTHO05D003904 9.2e-49 198.4 200 50.5
Ah.04g158790 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-48 198.0 265 40.0
Ah.01g017940 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.7e-48 196.8 265 39.2
Ah.13g069490 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.0e-48 195.7 265 39.2
Ah.15g097480 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.0e-47 194.9 266 39.8
Ah.06g187260 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-47 194.5 309 36.2
Rhsim06G0137900 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.3e-47 193.7 188 50.5
Ah.07g201230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.0e-47 193.4 295 36.6
Ah.13g068770 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.0e-47 193.4 265 39.2
PSO832G3916 Papaver somniferum HOM05D003057 ORTHO05D003904 3.0e-47 193.4 228 44.7
Ah.03g145610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-46 191.4 313 34.8
Ah.06g184390 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.5e-46 190.3 265 38.5
Ah.14g084280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.3e-46 189.9 322 34.2
TPR.G14797 Trifolium pratense HOM05D003057 ORTHO05D003904 3.3e-46 189.9 243 44.0
Ah.01g013430 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.6e-46 189.1 265 39.2
Ah.04g155590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.6e-46 189.1 265 37.7
PSO063G0536 Papaver somniferum HOM05D003057 ORTHO05D003904 5.6e-46 189.1 219 45.7
Ah.03g140530 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.3e-46 188.7 266 39.1
Ah.10g026650 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-45 188.0 336 33.6
PSO017G7296 Papaver somniferum HOM05D003057 ORTHO05D003904 1.6e-45 187.6 215 46.0
PSO339G3646 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-44 184.9 182 47.3
TPR.G34813 Trifolium pratense HOM05D003057 ORTHO05D003904 4.0e-44 183.0 265 40.0
Ah.06g181680 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.8e-44 182.2 251 38.6
PSO017G5767 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-43 181.4 196 45.9
COL.COLO4_21501 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.5e-43 181.0 160 55.0
Ah.04g162690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.6e-43 180.3 251 38.6
Hma1.2p1_1282F.1_g272710 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 4.4e-43 179.5 276 37.7
Ah.01g023980 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.7e-42 177.6 243 39.5
Ah.16g106200 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.7e-42 176.4 252 36.1
PSO357G0652 Papaver somniferum HOM05D003057 ORTHO05D003904 2.7e-40 170.2 303 34.7
PSO210G4431 Papaver somniferum HOM05D003057 ORTHO05D003904 7.8e-40 168.7 189 46.0
COL.COLO4_35241 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.3e-39 167.9 332 33.7
TPR.G13641 Trifolium pratense HOM05D003057 ORTHO05D003904 3.0e-39 166.8 160 53.1
Ah.11g045640 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.6e-39 165.2 255 35.3
Ah.04g164590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-38 164.9 255 35.3
Ah.11g041830 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-38 164.9 248 35.1
COL.COLO4_22596 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.1e-38 164.9 294 36.1
Ah.01g002160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.5e-38 164.5 255 34.5
Rhsim01G0178000 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.9e-38 164.1 188 45.2
PSO384G0803 Papaver somniferum HOM05D003057 ORTHO05D003904 2.5e-38 163.7 303 32.7
Ah.06g181920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.3e-38 162.9 244 36.5
Ah.10g032220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.6e-38 162.5 255 35.7
PSO339G6256 Papaver somniferum HOM05D003057 ORTHO05D003904 9.6e-38 161.8 303 33.3
Ah.06g182610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-37 161.0 244 35.7
Ah.16g103350 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-37 161.0 244 36.1
Ah.06g181160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.1e-37 160.6 255 34.1
Ah.07g206230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.1e-37 160.6 255 34.1
Ah.10g032920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.1e-37 160.6 253 35.2
PSO339G0276 Papaver somniferum HOM05D003057 ORTHO05D003904 2.1e-37 160.6 145 54.5
Ah.11g046560 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.7e-37 159.5 255 33.7
TWI15G0994 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 4.7e-37 159.5 165 47.3
Ah.03g143550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-36 158.3 258 34.9
Ah.03g144340 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.1e-36 156.8 218 37.6
Ah.05g175220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.6e-35 153.7 253 33.6
Os06g0523701 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D003904 2.6e-35 153.7 163 46.0
QL01p049124 Quercus lobata HOM05D003057 ORTHO05D003904 3.4e-35 153.3 240 35.0
COL.COLO4_37623 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.4e-35 152.9 195 45.1
PSO384G2001 Papaver somniferum HOM05D003057 ORTHO05D003904 5.8e-35 152.5 171 43.9
Ah.13g067120 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.9e-35 151.8 209 37.8
COL.COLO4_37789 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.9e-33 147.5 138 52.9
PSO339G0160 Papaver somniferum HOM05D003057 ORTHO05D003904 2.4e-33 147.1 177 43.5
TPR.G38366 Trifolium pratense HOM05D003057 ORTHO05D003904 2.4e-33 147.1 241 35.3
PSO832G4354 Papaver somniferum HOM05D003057 ORTHO05D003904 1.7e-31 141.0 212 37.7
PSO170G5731 Papaver somniferum HOM05D003057 ORTHO05D003904 2.3e-31 140.6 132 53.0
Ah.07g201280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.6e-31 139.0 188 37.2
PSO478G2060 Papaver somniferum HOM05D003057 ORTHO05D003904 3.3e-30 136.7 133 51.1
PSO017G4412 Papaver somniferum HOM05D003057 ORTHO05D003904 5.6e-30 136.0 247 33.6
Rhsim08G0101000 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.3e-30 135.6 119 54.6
PSO675G0308 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-29 134.8 269 32.3
TPR.G33575 Trifolium pratense HOM05D003057 ORTHO05D003904 1.6e-29 134.4 121 52.1
PSO017G3866 Papaver somniferum HOM05D003057 ORTHO05D003904 2.8e-29 133.7 131 51.1
PSO339G2793 Papaver somniferum HOM05D003057 ORTHO05D003904 6.2e-29 132.5 308 31.5
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-28 131.7 158 43.7
TWI31G1500 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 3.1e-28 130.2 235 34.9
TPR.G9017 Trifolium pratense HOM05D003057 ORTHO05D003904 1.2e-27 128.3 112 55.4
QL05p017993 Quercus lobata HOM05D003057 ORTHO05D003904 5.8e-27 125.9 147 42.9
PSO210G2682 Papaver somniferum HOM05D003057 ORTHO05D003904 6.4e-26 122.5 232 31.9
PSO478G2424 Papaver somniferum HOM05D003057 ORTHO05D003904 1.9e-25 120.9 285 30.2
Rhsim01G0125100 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.9e-25 120.9 116 50.0
PSO063G5105 Papaver somniferum HOM05D003057 ORTHO05D003904 3.5e-24 116.7 126 48.4
PSO017G5295 Papaver somniferum HOM05D003057 ORTHO05D003904 3.9e-23 113.2 136 41.2
COL.COLO4_31045 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.3e-22 109.8 143 42.0
Psat6g164240 Pisum sativum HOM05D003057 ORTHO05D003904 5.3e-20 102.8 146 40.4
Psat7g039600 Pisum sativum HOM05D003057 ORTHO05D003904 5.3e-20 102.8 146 40.4
Psat7g220920 Pisum sativum HOM05D003057 ORTHO05D003904 5.3e-20 102.8 146 40.4
COL.COLO4_09308 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.5e-19 101.3 97 50.5
COL.COLO4_04492 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.4e-19 100.1 280 29.3
TPR.G14789 Trifolium pratense HOM05D003057 ORTHO05D003904 9.9e-19 98.6 87 55.2
Duzib205G1595 Durio zibethinus HOM05D003057 ORTHO05D003904 2.9e-18 97.1 284 28.2
PSO210G0544 Papaver somniferum HOM05D003057 ORTHO05D003904 4.9e-18 96.3 101 46.5
AUR62026174 Chenopodium quinoa HOM05D003057 ORTHO05D003904 8.4e-18 95.5 147 38.1
ECA234G0491 Erigeron canadensis HOM05D003057 ORTHO05D003904 8.4e-18 95.5 101 48.5
COL.COLO4_33793 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.4e-17 94.0 127 37.8
CAN.G960.86 Capsicum annuum HOM05D003057 ORTHO05D003904 9.3e-17 92.0 102 46.1
PSO832G1677 Papaver somniferum HOM05D003057 ORTHO05D003904 1.6e-16 91.3 101 43.6
PGSC0003DMG400002198 Solanum tuberosum HOM05D003057 ORTHO05D003904 3.9e-15 86.7 100 44.0
Ah.15g097160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.1e-15 86.3 102 38.2
AUR62022531 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.1e-15 86.3 111 36.0
PSO675G7907 Papaver somniferum HOM05D000294 ORTHO05D000177 1.1e-14 85.1 185 29.2
PSO017G4793 Papaver somniferum HOM05D003057 ORTHO05D003904 4.8e-13 79.7 101 42.6
PSO357G0194 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-12 78.6 169 30.2
SGA_v2.0_scaffold35G14135 Striga asiatica HOM05D003057 ORTHO05D012636 1.2e-11 75.1 179 33.5
COL.COLO4_35222 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.7e-10 71.2 79 44.3
Os10g0117400 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D003904 3.8e-10 70.1 99 36.4
SGA_v2.0_scaffold295G47505 Striga asiatica HOM05D003057 ORTHO05D012636 4.9e-10 69.7 225 32.4
SGA_v2.0_scaffold116G32300 Striga asiatica HOM05D003057 ORTHO05D012636 1.1e-09 68.6 206 30.1
COL.COLO4_30277 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.6e-08 64.7 169 28.4
TPR.G29392 Trifolium pratense HOM05D003057 ORTHO05D003904 1.6e-08 64.7 174 29.9
SGA_v2.0_scaffold216G42382 Striga asiatica HOM05D003057 ORTHO05D012636 2.7e-08 63.9 87 44.8
Medtr7g060420 Medicago truncatula HOM05D000645 ORTHO05D000494 1.1e-06 58.5 104 35.6
SGA_v2.0_scaffold165G38202 Striga asiatica HOM05D003057 ORTHO05D012636 1.1e-06 58.5 148 31.8
PSO675G6041 Papaver somniferum HOM05D003057 ORTHO05D003904 7.4e-06 55.8 111 33.3
TPR.G5033 Trifolium pratense HOM05D003057 ORTHO05D003904 9.6e-06 55.5 125 30.4


User provided reference genes

Program Settings