Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 0.0e+00 1433.7 696 100.0
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 1.4e-298 1029.2 686 74.6
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 2.9e-291 1005.0 702 70.9
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 2.4e-277 958.7 653 71.5
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 5.4e-274 947.6 631 72.3
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 3.0e-272 941.8 637 70.5
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 8.7e-272 940.3 617 72.8
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 1.1e-271 939.9 633 71.2
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 2.1e-270 935.6 611 72.8
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 1.4e-269 932.9 681 67.7
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 2.0e-268 929.1 608 72.9
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 9.9e-268 926.8 607 72.7
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 2.2e-267 925.6 593 74.0
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 1.1e-266 923.3 605 71.9
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 1.4e-266 922.9 678 66.2
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 1.4e-266 922.9 605 71.7
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 2.4e-266 922.2 617 71.0
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 2.4e-266 922.2 653 68.9
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 3.2e-266 921.8 612 71.2
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 5.4e-266 921.0 617 71.0
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 1.2e-265 919.8 615 70.4
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 4.6e-265 917.9 617 70.2
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 4.6e-265 917.9 674 67.4
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 7.9e-265 917.1 617 70.8
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 7.9e-265 917.1 604 71.7
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 1.0e-264 916.8 644 69.1
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 1.3e-264 916.4 609 71.8
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 1.3e-264 916.4 694 65.3
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 1.3e-264 916.4 593 73.2
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 1.8e-264 916.0 680 66.0
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 1.8e-264 916.0 596 72.8
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 3.9e-264 914.8 674 66.2
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 5.1e-264 914.4 617 70.5
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 6.7e-264 914.1 711 65.4
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 8.7e-264 913.7 689 65.2
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 1.1e-263 913.3 675 67.0
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 1.5e-263 912.9 605 71.6
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 1.9e-263 912.5 611 70.0
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 3.3e-263 911.8 632 68.8
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 3.3e-263 911.8 628 69.7
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 3.3e-263 911.8 613 71.3
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 3.3e-263 911.8 605 70.6
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 2.8e-262 908.7 606 71.0
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 3.7e-262 908.3 633 68.6
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 3.7e-262 908.3 643 67.5
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 6.2e-262 907.5 605 70.6
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 6.2e-262 907.5 618 70.7
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 6.2e-262 907.5 611 69.2
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 6.2e-262 907.5 621 70.5
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 1.4e-261 906.4 683 65.0
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 1.4e-261 906.4 645 68.1
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 2.4e-261 905.6 593 71.8
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 4.5e-260 901.4 610 70.0
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 7.6e-260 900.6 615 69.6
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 9.9e-260 900.2 635 67.2
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 2.2e-259 899.0 647 66.5
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 8.4e-259 897.1 601 69.9
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 3.2e-258 895.2 604 69.2
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 9.3e-258 893.6 646 66.9
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 6.0e-257 891.0 653 65.5
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 7.9e-257 890.6 650 66.3
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 5.1e-256 887.9 632 68.0
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 8.7e-256 887.1 632 68.2
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 1.5e-255 886.3 593 70.2
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 5.6e-255 884.4 647 66.0
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 9.6e-255 883.6 683 63.8
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 1.6e-254 882.9 605 69.3
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 5.3e-253 877.9 696 63.9
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 1.2e-252 876.7 653 65.1
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 2.9e-251 872.1 608 70.2
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 7.1e-250 867.5 676 64.2
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 3.5e-249 865.1 570 70.7
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 4.1e-245 851.7 675 63.7
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 5.3e-245 851.3 792 57.1
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 1.7e-243 846.3 689 62.4
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 2.2e-243 845.9 614 67.1
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 1.2e-236 823.5 644 63.0
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 1.0e-235 820.5 756 56.3
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 5.0e-235 818.1 603 64.5
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 1.1e-234 817.0 616 66.2
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 1.4e-232 810.1 596 64.4
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 1.8e-232 809.7 555 68.1
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 1.5e-231 806.6 523 72.1
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 2.9e-227 792.3 524 71.0
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 8.2e-222 774.2 704 58.4
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 5.3e-221 771.5 699 58.5
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 4.0e-216 755.4 617 61.1
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 7.5e-215 751.1 565 64.2
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 3.7e-214 748.8 488 71.9
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 7.0e-189 664.8 369 81.6
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 2.0e-188 663.3 606 54.1
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 2.4e-181 639.8 534 59.6
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 1.2e-180 637.5 505 63.0
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 6.2e-169 598.6 642 49.7
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 2.2e-158 563.5 493 57.2
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 5.1e-155 552.4 597 50.1
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 5.1e-155 552.4 631 46.1
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 1.1e-152 544.7 609 46.0
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 2.7e-148 530.0 409 62.3
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 3.9e-131 473.0 416 60.3
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 1.4e-125 454.5 496 52.6
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 1.3e-110 404.8 358 58.7
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 2.2e-94 350.9 201 76.6
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 1.5e-90 338.2 202 74.3
FAN12G3251 Fragaria x ananassa HOM05D006266 ORTHO05D008016 9.5e-85 318.9 188 79.8
Cc03_g11980 Coffea canephora HOM05D006266 ORTHO05D008016 1.2e-79 302.0 169 84.0
EL10Ac3g06005 Beta vulgaris HOM05D006266 ORTHO05D008016 2.7e-79 300.8 209 73.2
Sopen02g004370 Solanum pennellii HOM05D006266 ORTHO05D008016 5.6e-77 293.1 170 82.4
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 1.6e-76 291.6 172 76.2
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 8.4e-49 199.5 206 51.9
Os10g0516300 Oryza sativa ssp. japonica HOM05D006266 ORTHO05D008016 1.6e-47 195.3 116 74.1
CSS0026769 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.1e-47 194.9 120 74.2
CSS0016449 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 5.1e-46 190.3 106 84.9
CSS0001057 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 5.3e-35 153.7 127 63.0
CSS0026763 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.9e-33 147.9 127 60.6
SEGI_08796 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 1.9e-32 145.2 82 78.0
SEGI_29623 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.2e-32 144.4 112 66.1
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 6.7e-30 136.7 87 77.0
CSS0001558 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.0e-25 122.9 112 58.9
CSS0004821 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.0e-25 122.9 112 58.9
arahy.Tifrunner.gnm1.ann1.QA6FBH Arachis hypogaea HOM05D006266 ORTHO05D008016 4.6e-15 87.4 119 47.1
CSS0016187 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.2e-12 78.6 134 41.8
CSS0019028 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 1.1e-11 76.3 45 73.3
CSS0026903 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 4.1e-11 74.3 51 68.6
Lsat_1_v5_gn_7_84681 Lactuca sativa HOM05D006266 ORTHO05D004407 9.0e-11 73.2 51 60.8
CSS0008442 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 2.0e-10 72.0 45 68.9
CSS0022444 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 2.0e-10 72.0 45 68.9
CSS0006121 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 3.2e-08 64.7 34 79.4
AUR62006021 Chenopodium quinoa HOM05D001494 ORTHO05D001364 1.6e-07 62.4 42 61.9
Sp4g25500 Schrenkiella parvula HOM05D000001 ORTHO05D000003 3.9e-06 57.8 100 38.0


User provided reference genes

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