Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold17G08121 Striga asiatica HOM05D008147 ORTHO05D010215 1.5e-132 476.1 225 100.0
SGA_v2.0_scaffold279G46805 Striga asiatica HOM05D009707 ORTHO05D010215 3.1e-130 468.4 225 98.7
SGA_v2.0_scaffold167G38423 Striga asiatica HOM05D008147 ORTHO05D010215 2.0e-129 465.7 225 98.2
SGA_v2.0_scaffold148G36410 Striga asiatica HOM05D009707 ORTHO05D010215 1.3e-128 463.0 220 99.1
SGA_v2.0_scaffold45G17016 Striga asiatica HOM05D009707 ORTHO05D010215 9.5e-79 297.4 151 92.1
SGA_v2.0_scaffold27G11629 Striga asiatica HOM05D009707 ORTHO05D010215 5.2e-77 291.6 192 70.3
SGA_v2.0_scaffold68G22817 Striga asiatica HOM05D009707 ORTHO05D010215 2.9e-75 285.8 184 71.2
SGA_v2.0_scaffold121G33123 Striga asiatica HOM05D009707 ORTHO05D010215 3.3e-71 272.3 208 62.5
SGA_v2.0_scaffold296G47550 Striga asiatica HOM05D009707 ORTHO05D010215 4.3e-63 245.4 209 63.2
SGA_v2.0_scaffold11G05576 Striga asiatica HOM05D009707 ORTHO05D010215 1.2e-49 200.7 198 50.5
SGA_v2.0_scaffold19G08868 Striga asiatica HOM05D009707 ORTHO05D010215 2.7e-49 199.5 198 48.0
SGA_v2.0_scaffold380G50359 Striga asiatica HOM05D009707 ORTHO05D010215 1.5e-47 193.7 198 47.0
SGA_v2.0_scaffold102G29871 Striga asiatica HOM05D009707 ORTHO05D010215 1.9e-47 193.4 198 49.0
SGA_v2.0_scaffold267G46190 Striga asiatica HOM05D009707 ORTHO05D010215 1.3e-38 164.1 183 45.9
SGA_v2.0_scaffold17G08081 Striga asiatica HOM05D009707 ORTHO05D010215 2.8e-38 162.9 82 90.2
SGA_v2.0_scaffold102G29874 Striga asiatica HOM05D009707 ORTHO05D000277 1.0e-35 154.5 198 43.4
SGA_v2.0_scaffold214G42276 Striga asiatica HOM05D009707 ORTHO05D010215 3.8e-35 152.5 175 43.4
SGA_v2.0_scaffold123G33398 Striga asiatica HOM05D008147 ORTHO05D010215 4.2e-34 149.1 151 45.7
SGA_v2.0_scaffold21G09509 Striga asiatica HOM05D008147 ORTHO05D010215 4.2e-34 149.1 193 37.8
SGA_v2.0_scaffold26G11237 Striga asiatica HOM05D008147 ORTHO05D010215 6.1e-33 145.2 191 37.7
SGA_v2.0_scaffold88G27294 Striga asiatica HOM05D008147 ORTHO05D010215 1.3e-32 144.1 170 40.0
SGA_v2.0_scaffold3G01693 Striga asiatica HOM05D008147 ORTHO05D010215 1.8e-32 143.7 142 49.3
SGA_v2.0_scaffold74G24735 Striga asiatica HOM05D008147 ORTHO05D010215 3.3e-31 139.4 186 38.7
SGA_v2.0_scaffold23G10065 Striga asiatica HOM05D008147 ORTHO05D010215 7.4e-31 138.3 170 38.2
SGA_v2.0_scaffold123G33411 Striga asiatica HOM05D008147 ORTHO05D010215 9.7e-31 137.9 170 39.4
SGA_v2.0_scaffold215G42337 Striga asiatica HOM05D008147 ORTHO05D010215 2.2e-30 136.7 170 39.4
SGA_v2.0_scaffold21G09510 Striga asiatica HOM05D008147 ORTHO05D010215 1.7e-27 127.1 190 34.2
SGA_v2.0_scaffold19G08712 Striga asiatica HOM05D009707 ORTHO05D010215 1.0e-24 117.9 143 39.9
SGA_v2.0_scaffold25G11173 Striga asiatica HOM05D008147 ORTHO05D010215 2.8e-22 109.8 181 34.3
SGA_v2.0_scaffold67G22671 Striga asiatica HOM05D008147 ORTHO05D010215 1.4e-21 107.5 187 30.5
SGA_v2.0_scaffold23G10064 Striga asiatica HOM05D008147 ORTHO05D010215 2.4e-21 106.7 167 32.3
SGA_v2.0_scaffold165G38218 Striga asiatica HOM05D008147 ORTHO05D010215 1.4e-18 97.4 182 30.8
SGA_v2.0_scaffold87G27115 Striga asiatica HOM05D008147 ORTHO05D010215 2.5e-18 96.7 160 33.1
SGA_v2.0_scaffold35G14029 Striga asiatica HOM05D008147 ORTHO05D010215 7.9e-17 91.7 191 29.8
SGA_v2.0_scaffold103G30050 Striga asiatica HOM05D008147 ORTHO05D010215 1.5e-15 87.4 203 27.6
SGA_v2.0_scaffold165G38219 Striga asiatica HOM05D008147 ORTHO05D010215 1.5e-15 87.4 80 45.0
SGA_v2.0_scaffold26G11238 Striga asiatica HOM05D008147 ORTHO05D010215 2.0e-15 87.0 126 34.1
SGA_v2.0_scaffold260G45869 Striga asiatica HOM05D008147 ORTHO05D010215 3.7e-14 82.8 109 36.7
SGA_v2.0_scaffold124G33512 Striga asiatica HOM05D008147 ORTHO05D010215 7.0e-13 78.6 121 35.5
SGA_v2.0_scaffold82G26240 Striga asiatica HOM05D008147 ORTHO05D010215 7.7e-12 75.1 65 49.2
SGA_v2.0_scaffold88G27295 Striga asiatica HOM05D008147 ORTHO05D010215 3.8e-11 72.8 119 31.9
SGA_v2.0_scaffold4G02419 Striga asiatica HOM05D001120 ORTHO05D002943 5.0e-11 72.4 81 40.7
SGA_v2.0_scaffold134G34733 Striga asiatica HOM05D001733 ORTHO05D010215 6.5e-11 72.0 36 83.3
SGA_v2.0_scaffold3G01771 Striga asiatica HOM05D009707 ORTHO05D010215 1.5e-10 70.9 74 45.9
SGA_v2.0_scaffold152G36802 Striga asiatica HOM05D009707 ORTHO05D010215 1.9e-10 70.5 74 45.9
SGA_v2.0_scaffold30G12438 Striga asiatica HOM05D008147 ORTHO05D010215 1.9e-10 70.5 99 35.4
MD06G1157600 Malus domestica HOM05D005797 ORTHO05D006479 3.6e-09 66.2 96 30.2
SGA_v2.0_scaffold443G51698 Striga asiatica HOM05D008147 ORTHO05D010215 8.0e-09 65.1 68 41.2
Eucgr.K02760 Eucalyptus grandis HOM05D005797 ORTHO05D006479 1.8e-08 63.9 113 30.1
Sed0000312 Sechium edule HOM05D007907 ORTHO05D009079 2.3e-08 63.5 99 31.3
SEGI_32289 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 3.0e-08 63.2 107 29.0
SGA_v2.0_scaffold64G22085 Striga asiatica HOM05D008147 ORTHO05D010215 3.0e-08 63.2 203 23.6
ECA232G4654 Erigeron canadensis HOM05D000823 ORTHO05D016096 4.0e-08 62.8 201 22.4
Sed0027282 Sechium edule HOM05D005797 ORTHO05D006479 1.1e-07 61.2 121 27.3
TWI79G1437 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 1.5e-07 60.8 239 22.2
Atru.chr5.2871 Acer truncatum HOM05D000395 ORTHO05D000088 2.0e-07 60.5 103 31.1
Dinv26764 Davidia involucrata HOM05D000823 ORTHO05D000088 2.6e-07 60.1 103 30.1
SGA_v2.0_scaffold618G53218 Striga asiatica HOM05D008147 ORTHO05D010215 2.6e-07 60.1 122 30.3
Manes.07G115200 Manihot esculenta HOM05D000395 ORTHO05D000088 3.3e-07 59.7 96 31.2
QL10p005358 Quercus lobata HOM05D005797 ORTHO05D006479 3.3e-07 59.7 98 32.7
SGA_v2.0_scaffold75G24968 Striga asiatica HOM05D008147 ORTHO05D010215 4.4e-07 59.3 115 31.3
Aqoxy3G02207 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 5.7e-07 58.9 98 28.6
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 5.7e-07 58.9 101 27.7
Aqoxy6G00931 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 7.5e-07 58.5 95 31.6
MBI16_g19885_MAGBIO Magnolia biondii HOM05D000823 ORTHO05D000088 7.5e-07 58.5 98 27.6
Haze_07281 Corylus avellana HOM05D005797 ORTHO05D006479 1.3e-06 57.8 114 27.2
Prupe.5G157600 Prunus persica HOM05D005797 ORTHO05D006479 1.3e-06 57.8 96 29.2
TAR625G0462 Trochodendron aralioides HOM05D000823 ORTHO05D000088 1.3e-06 57.8 96 29.2
Lj5g0002825 Lotus japonicus HOM05D000395 ORTHO05D000088 1.7e-06 57.4 94 27.7
ClCG03G003480 Citrullus lanatus HOM05D005797 ORTHO05D006479 2.2e-06 57.0 96 28.1
Glyma.20G108400 Glycine max HOM05D000395 ORTHO05D000088 2.2e-06 57.0 94 25.5
Aqoxy6G00932 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 2.8e-06 56.6 95 31.6
GSVIVG01007552001 Vitis vinifera HOM05D005797 ORTHO05D006479 2.8e-06 56.6 161 26.1
Ah.06g189670 Amaranthus hybridus HOM05D000823 ORTHO05D000088 3.7e-06 56.2 94 26.6
PGSC0003DMG400005934 Solanum tuberosum HOM05D000823 ORTHO05D000088 3.7e-06 56.2 238 19.7
Ah.06g189660 Amaranthus hybridus HOM05D000823 ORTHO05D000088 6.3e-06 55.5 94 28.7
Os03g0619850 Oryza sativa ssp. japonica HOM05D015920 ORTHO05D010215 6.3e-06 55.5 89 29.2
TWI09G0236 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 8.2e-06 55.1 106 28.3


User provided reference genes

Program Settings