Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold17G08056 Striga asiatica HOM05D010396 ORTHO05D002765 1.0e-75 286.6 139 100.0
SGA_v2.0_scaffold308G48118 Striga asiatica HOM05D012404 ORTHO05D002765 1.5e-34 149.8 89 83.1
SGA_v2.0_scaffold103G30032 Striga asiatica HOM05D000017 ORTHO05D000013 8.9e-27 124.0 75 82.7
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 1.3e-12 77.0 126 31.0
SGA_v2.0_scaffold220G42613 Striga asiatica HOM05D015252 ORTHO05D002765 8.1e-12 74.3 102 33.3
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.0e-11 72.0 118 28.0
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 4.0e-11 72.0 112 32.1
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 5.3e-11 71.6 112 31.2
SGA_v2.0_scaffold10G05133 Striga asiatica HOM05D015252 ORTHO05D002765 1.3e-09 67.0 96 33.3
CANSAT11G2236 Cannabis sativa HOM05D010396 ORTHO05D002765 8.4e-09 64.3 126 30.2
CANSAT21G2439 Cannabis sativa HOM05D010396 ORTHO05D002765 8.4e-09 64.3 136 30.9
CANSAT35G0346 Cannabis sativa HOM05D010396 ORTHO05D002765 8.4e-09 64.3 131 31.3
CANSAT35G0400 Cannabis sativa HOM05D010396 ORTHO05D002765 8.4e-09 64.3 136 30.1
CANSAT35G0692 Cannabis sativa HOM05D010396 ORTHO05D002765 8.4e-09 64.3 126 30.2
CANSAT25G1832 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-08 63.9 140 27.9
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 1.1e-08 63.9 108 33.3
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-08 63.9 132 27.3
CANSAT01G2097 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-08 63.5 123 30.9
CANSAT21G1820 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-08 63.5 108 33.3
CANSAT25G2859 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-08 63.5 96 33.3
CANSAT80G0794 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-08 63.5 108 33.3
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 1.9e-08 63.2 127 29.1
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-08 63.2 95 31.6
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-08 62.8 104 31.7
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-08 62.8 104 31.7
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 3.2e-08 62.4 112 30.4
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 3.2e-08 62.4 112 30.4
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 3.2e-08 62.4 112 30.4
CANSAT64G1880 Cannabis sativa HOM05D010396 ORTHO05D002765 4.2e-08 62.0 136 30.9
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 4.2e-08 62.0 100 31.0
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 5.4e-08 61.6 129 27.9
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 5.4e-08 61.6 97 32.0
CANSAT56G0158 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-08 61.2 100 30.0
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.1e-08 61.2 86 30.2
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 7.1e-08 61.2 92 31.5
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 7.1e-08 61.2 92 31.5
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-07 60.5 110 30.0
CANSAT64G1249 Cannabis sativa HOM05D010396 ORTHO05D002765 2.7e-07 59.3 99 31.3
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-07 59.3 125 26.4
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 3.5e-07 58.9 129 27.1
CANSAT54G0823 Cannabis sativa HOM05D000017 ORTHO05D000013 6.0e-07 58.2 95 30.5
SGA_v2.0_scaffold106G30719 Striga asiatica HOM05D015252 ORTHO05D002765 7.9e-07 57.8 85 32.9
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 1.7e-06 56.6 85 30.6
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.3e-06 56.2 102 29.4
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 2.3e-06 56.2 86 30.2
Peaxi162Scf00164g01221 Petunia axillaris HOM05D006864 ORTHO05D002765 3.9e-06 55.5 92 30.4
SGA_v2.0_scaffold122G33338 Striga asiatica HOM05D000196 ORTHO05D010161 3.9e-06 55.5 67 35.8
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.1e-06 55.1 113 29.2
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 5.1e-06 55.1 92 27.2
CANSAT01G2588 Cannabis sativa HOM05D000017 ORTHO05D000013 6.6e-06 54.7 53 45.3
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.7e-06 54.3 111 27.9
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.7e-06 54.3 93 26.9


User provided reference genes

Program Settings