Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold17G08026 Striga asiatica HOM05D008413 ORTHO05D000401 1.5e-217 759.2 376 100.0
SGA_v2.0_scaffold169G38717 Striga asiatica HOM05D008413 ORTHO05D000401 8.9e-130 467.6 408 64.7
SGA_v2.0_scaffold218G42484 Striga asiatica HOM05D008413 ORTHO05D000401 7.6e-121 438.0 401 63.1
SGA_v2.0_scaffold12G05983 Striga asiatica HOM05D008413 ORTHO05D000401 4.2e-111 405.6 341 65.7
SGA_v2.0_scaffold4G02509 Striga asiatica HOM05D008413 ORTHO05D000401 1.8e-98 363.6 340 62.4
SGA_v2.0_scaffold90G27895 Striga asiatica HOM05D008413 ORTHO05D000401 3.1e-82 309.7 299 60.9
SGA_v2.0_scaffold86G26910 Striga asiatica HOM05D008413 ORTHO05D000401 9.7e-68 261.5 215 65.6
SGA_v2.0_scaffold368G50078 Striga asiatica HOM05D008413 ORTHO05D000401 3.1e-66 256.5 336 47.3
SGA_v2.0_scaffold90G27840 Striga asiatica HOM05D008413 ORTHO05D000401 6.1e-62 242.3 382 44.5
SGA_v2.0_scaffold119G32741 Striga asiatica HOM05D008413 ORTHO05D000401 2.0e-60 237.3 304 49.0
SGA_v2.0_scaffold61G21156 Striga asiatica HOM05D008413 ORTHO05D000401 4.4e-52 209.5 280 49.6
SGA_v2.0_scaffold19G08596 Striga asiatica HOM05D008413 ORTHO05D000401 8.8e-45 185.3 113 84.1
SGA_v2.0_scaffold177G39426 Striga asiatica HOM05D008413 ORTHO05D000401 1.5e-44 184.5 284 44.7
Atru.chr1.1934 Acer truncatum HOM05D008413 ORTHO05D000401 3.1e-42 176.8 318 39.6
SGA_v2.0_scaffold28G12014 Striga asiatica HOM05D008413 ORTHO05D000401 5.9e-41 172.6 347 36.9
SGA_v2.0_scaffold323G48638 Striga asiatica HOM05D008413 ORTHO05D000401 5.9e-41 172.6 201 54.2
Atru.chr1.2141 Acer truncatum HOM05D008413 ORTHO05D000401 2.9e-40 170.2 314 36.9
SGA_v2.0_scaffold85G26643 Striga asiatica HOM05D008413 ORTHO05D000401 5.2e-37 159.5 259 39.0
SGA_v2.0_scaffold50G18468 Striga asiatica HOM05D008413 ORTHO05D000401 9.8e-36 155.2 261 37.5
SGA_v2.0_scaffold208G41998 Striga asiatica HOM05D008413 ORTHO05D000401 1.3e-35 154.8 258 38.0
SGA_v2.0_scaffold234G43617 Striga asiatica HOM05D008413 ORTHO05D000401 2.9e-32 143.7 241 41.1
SGA_v2.0_scaffold84G26501 Striga asiatica HOM05D008413 ORTHO05D000401 3.4e-28 130.2 184 41.8
PSO541G5389 Papaver somniferum HOM05D008413 ORTHO05D000401 4.1e-26 123.2 347 29.4
SGA_v2.0_scaffold176G39371 Striga asiatica HOM05D008413 ORTHO05D000401 9.2e-26 122.1 331 29.6
PSO591G0033 Papaver somniferum HOM05D008413 ORTHO05D000401 1.2e-25 121.7 227 34.4
PSO478G0274 Papaver somniferum HOM05D008413 ORTHO05D000401 4.6e-25 119.8 346 29.2
PSO782G4524 Papaver somniferum HOM05D008413 ORTHO05D000401 1.8e-21 107.8 237 32.5
SGA_v2.0_scaffold55G19853 Striga asiatica HOM05D008413 ORTHO05D000401 4.0e-21 106.7 156 41.0
PSO063G5428 Papaver somniferum HOM05D008413 ORTHO05D000401 1.5e-20 104.8 208 33.2
PSO384G2190 Papaver somniferum HOM05D008413 ORTHO05D000401 2.0e-20 104.4 228 32.0
PSO017G6541 Papaver somniferum HOM05D008413 ORTHO05D000401 2.6e-20 104.0 209 33.5
PSO063G1996 Papaver somniferum HOM05D008413 ORTHO05D000401 3.4e-20 103.6 208 33.2
PSO339G5332 Papaver somniferum HOM05D008413 ORTHO05D000401 8.3e-19 99.0 282 29.4
SGA_v2.0_scaffold74G24716 Striga asiatica HOM05D008413 ORTHO05D000401 3.2e-18 97.1 181 35.9
PSO675G5967 Papaver somniferum HOM05D008413 ORTHO05D000401 5.4e-18 96.3 186 35.5
PSO541G0947 Papaver somniferum HOM05D008413 ORTHO05D000401 7.0e-18 95.9 292 26.7
SGA_v2.0_scaffold284G47013 Striga asiatica HOM05D008413 ORTHO05D000401 7.0e-18 95.9 293 28.3
SGA_v2.0_scaffold38G15030 Striga asiatica HOM05D008413 ORTHO05D000401 6.0e-17 92.8 376 25.5
SGA_v2.0_scaffold22G09929 Striga asiatica HOM05D008413 ORTHO05D000401 5.6e-15 86.3 313 28.1
Atru.chr11.187 Acer truncatum HOM05D008413 ORTHO05D000401 2.6e-12 77.4 163 36.2
SGA_v2.0_scaffold221G42721 Striga asiatica HOM05D008413 ORTHO05D000401 4.6e-09 66.6 210 27.6
Hma1.2p1_1313F.1_g274940 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 6.0e-09 66.2 192 28.1
SGA_v2.0_scaffold18G08316 Striga asiatica HOM05D008413 ORTHO05D000401 1.0e-08 65.5 57 56.1
SGA_v2.0_scaffold241G44187 Striga asiatica HOM05D008413 ORTHO05D000401 1.0e-08 65.5 68 51.5
TWI53G0863 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.3e-08 65.1 160 30.6
Haze_20229 Corylus avellana HOM05D001576 ORTHO05D000401 8.6e-08 62.4 182 33.0
SGA_v2.0_scaffold6G03317 Striga asiatica HOM05D008413 ORTHO05D000401 1.1e-07 62.0 167 29.9
Aqoxy1G02949 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 2.1e-06 57.8 223 24.2
Aqoxy3G02110 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 2.8e-06 57.4 223 24.2
Zm00001eb138070 Zea mays HOM05D001576 ORTHO05D000401 2.8e-06 57.4 231 26.8
CiPaw.09G174900 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-06 57.0 174 25.9
PSO170G1591 Papaver somniferum HOM05D008413 ORTHO05D000401 6.2e-06 56.2 191 24.1


User provided reference genes

Program Settings