Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold17G07986 Striga asiatica HOM05D023227 ORTHO05D023168 3.9e-140 501.5 266 100.0
SGA_v2.0_scaffold326G48733 Striga asiatica HOM05D023227 ORTHO05D023168 1.6e-32 144.1 113 72.6
SGA_v2.0_scaffold16G07878 Striga asiatica HOM05D023227 ORTHO05D023168 4.6e-32 142.5 113 70.8
SGA_v2.0_scaffold192G40616 Striga asiatica HOM05D000100 ORTHO05D000052 7.9e-32 141.7 310 39.4
SGA_v2.0_scaffold83G26373 Striga asiatica HOM05D023227 ORTHO05D023168 9.4e-25 118.2 108 67.6
SGA_v2.0_scaffold41G15778 Striga asiatica HOM05D023227 ORTHO05D023168 5.9e-19 99.0 85 67.1
SGA_v2.0_scaffold97G29208 Striga asiatica HOM05D000100 ORTHO05D023168 6.7e-15 85.5 76 73.7
SalBow4G1158 Salvia bowleyana HOM05D000100 ORTHO05D000052 2.4e-12 77.0 314 28.0
MSTRG.27075 Avicennia marina HOM05D000100 ORTHO05D000052 7.0e-12 75.5 307 28.7
Cfa016316 Carpinus fangiana HOM05D000100 ORTHO05D000052 1.6e-11 74.3 161 38.5
SalBow4G0086 Salvia bowleyana HOM05D000100 ORTHO05D000052 1.5e-09 67.8 295 27.1
Migut.F00274 Erythranthe guttata HOM05D000100 ORTHO05D000052 9.4e-09 65.1 324 28.1
Lj1C1008T2 Lonicera japonica HOM05D000100 ORTHO05D000052 9.4e-09 65.1 73 47.9
Dinv28372 Davidia involucrata HOM05D000100 ORTHO05D000052 1.6e-08 64.3 151 38.4
DCAR_020277 Daucus carota HOM05D000039 ORTHO05D000052 2.7e-08 63.5 75 40.0
DCAR_020278 Daucus carota HOM05D000100 ORTHO05D000052 2.7e-08 63.5 75 40.0
HanXRQChr14g0448921 Helianthus annuus HOM05D000100 ORTHO05D000052 3.6e-08 63.2 96 42.7
TAR624G0728 Trochodendron aralioides HOM05D000100 ORTHO05D000052 6.1e-08 62.4 93 37.6
Sabra04G0046900 Salix brachista HOM05D000100 ORTHO05D000052 1.4e-07 61.2 76 42.1
TAR624G1098 Trochodendron aralioides HOM05D000100 ORTHO05D000052 1.4e-07 61.2 93 36.6
Eucgr.B03858 Eucalyptus grandis HOM05D000100 ORTHO05D000052 1.8e-07 60.8 75 41.3
Eucgr.B03860 Eucalyptus grandis HOM05D000100 ORTHO05D000052 1.8e-07 60.8 75 41.3
Potri.004G069700 Populus trichocarpa HOM05D000100 ORTHO05D000052 1.8e-07 60.8 71 40.8
Sabra17G0124900 Salix brachista HOM05D000100 ORTHO05D000052 1.8e-07 60.8 239 30.5
Atru.chr4.1145 Acer truncatum HOM05D000100 ORTHO05D000052 2.3e-07 60.5 76 42.1
Actinidia08593 Actinidia chinensis HOM05D000100 ORTHO05D000052 2.3e-07 60.5 74 45.9
Cfa002242 Carpinus fangiana HOM05D000100 ORTHO05D000052 2.3e-07 60.5 70 44.3
Manes.10G133680 Manihot esculenta HOM05D000100 ORTHO05D000052 2.3e-07 60.5 131 40.5
Eucgr.B03865 Eucalyptus grandis HOM05D000100 ORTHO05D000052 3.0e-07 60.1 69 44.9
vmacro06611 Vaccinium macrocarpon HOM05D000100 ORTHO05D000052 3.0e-07 60.1 138 40.6
Ciclev10004867m.g Citrus clementina HOM05D000100 ORTHO05D000052 4.0e-07 59.7 75 40.0
Cc02_g02190 Coffea canephora HOM05D000100 ORTHO05D000052 4.0e-07 59.7 70 44.3
QL09p012253 Quercus lobata HOM05D000100 ORTHO05D000052 5.2e-07 59.3 75 46.7
Rhsim03G0192900 Rhododendron simsii HOM05D000100 ORTHO05D000052 5.2e-07 59.3 70 44.3
Rhsim03G0194400 Rhododendron simsii HOM05D000100 ORTHO05D000052 5.2e-07 59.3 70 44.3
HPP92_008830 Vanilla planifolia HOM05D000100 ORTHO05D000052 5.2e-07 59.3 72 47.2
CANSAT35G0375 Cannabis sativa HOM05D000100 ORTHO05D000052 6.7e-07 58.9 77 46.8
Cfa019513 Carpinus fangiana HOM05D000100 ORTHO05D000052 6.7e-07 58.9 70 47.1
Eucgr.A02700 Eucalyptus grandis HOM05D000100 ORTHO05D000052 6.7e-07 58.9 76 40.8
FAN28G1892 Fragaria x ananassa HOM05D000100 ORTHO05D000052 6.7e-07 58.9 153 35.9
Oeu049085.1 Olea europaea HOM05D000100 ORTHO05D000052 6.7e-07 58.9 327 26.6
vmacro06608 Vaccinium macrocarpon HOM05D000100 ORTHO05D000052 6.7e-07 58.9 74 44.6
Cfa021270 Carpinus fangiana HOM05D000100 ORTHO05D000052 8.8e-07 58.5 70 48.6
Duzib205G0296 Durio zibethinus HOM05D000100 ORTHO05D000052 8.8e-07 58.5 76 40.8
ECA232G2996 Erigeron canadensis HOM05D000100 ORTHO05D000052 8.8e-07 58.5 74 45.9
FvH4_1g30110 Fragaria vesca HOM05D000100 ORTHO05D000052 8.8e-07 58.5 149 36.2
Oeu049093.1 Olea europaea HOM05D000100 ORTHO05D000052 8.8e-07 58.5 121 43.0
QL02p097460 Quercus lobata HOM05D000100 ORTHO05D000052 8.8e-07 58.5 283 27.9
Sabra17G0125000 Salix brachista HOM05D000100 ORTHO05D000052 8.8e-07 58.5 78 41.0
Eucgr.B03862 Eucalyptus grandis HOM05D000100 ORTHO05D000052 1.2e-06 58.2 75 41.3
Cfa016310 Carpinus fangiana HOM05D000100 ORTHO05D000052 1.5e-06 57.8 138 38.4
FAN19G1572 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.5e-06 57.8 149 36.2
Lsat_1_v5_gn_9_56880 Lactuca sativa HOM05D000100 ORTHO05D000052 1.5e-06 57.8 74 44.6
MD08G1218900 Malus domestica HOM05D000100 ORTHO05D000052 1.5e-06 57.8 74 43.2
Prupe.6G136900 Prunus persica HOM05D000100 ORTHO05D000052 2.0e-06 57.4 70 40.0
Eucgr.A02706 Eucalyptus grandis HOM05D000100 ORTHO05D000052 3.3e-06 56.6 76 38.2
MBI07_g11734_MAGBIO Magnolia biondii HOM05D000100 ORTHO05D000052 3.3e-06 56.6 78 39.7
DCAR_020282 Daucus carota HOM05D000100 ORTHO05D000052 4.4e-06 56.2 75 34.7
Nn1g01709 Nelumbo nucifera HOM05D000100 ORTHO05D000052 4.4e-06 56.2 143 36.4
Rhsim03G0192800 Rhododendron simsii HOM05D000100 ORTHO05D000052 4.4e-06 56.2 231 30.7
Cfa002552 Carpinus fangiana HOM05D000100 ORTHO05D000052 5.7e-06 55.8 116 37.1
Cfa016314 Carpinus fangiana HOM05D000100 ORTHO05D000052 5.7e-06 55.8 70 41.4
Haze_09243 Corylus avellana HOM05D000100 ORTHO05D000052 5.7e-06 55.8 140 38.6
HanXRQChr14g0448931 Helianthus annuus HOM05D000100 ORTHO05D000052 5.7e-06 55.8 62 54.8
Nn2g14895 Nelumbo nucifera HOM05D000100 ORTHO05D000052 5.7e-06 55.8 70 41.4
Potri.004G070900 Populus trichocarpa HOM05D000100 ORTHO05D000052 5.7e-06 55.8 74 40.5
Potri.017G150000 Populus trichocarpa HOM05D000100 ORTHO05D000052 5.7e-06 55.8 139 40.3
CDE03G0128 Ceratophyllum demersum HOM05D000100 ORTHO05D000052 7.5e-06 55.5 70 40.0
Ciclev10006910m.g Citrus clementina HOM05D000100 ORTHO05D000052 7.5e-06 55.5 76 36.8
Prupe.2G303000 Prunus persica HOM05D000100 ORTHO05D000052 7.5e-06 55.5 129 40.3
CiPaw.05G260800 Carya illinoinensis HOM05D000100 ORTHO05D000052 9.7e-06 55.1 70 44.3
Ciclev10025535m.g Citrus clementina HOM05D000100 ORTHO05D000052 9.7e-06 55.1 75 38.7
Lsat_1_v5_gn_2_134080 Lactuca sativa HOM05D000100 ORTHO05D000052 9.7e-06 55.1 143 39.2
TWI39G0668 Tripterygium wilfordii HOM05D000100 ORTHO05D000052 9.7e-06 55.1 136 39.7
TAR624G0595 Trochodendron aralioides HOM05D000100 ORTHO05D000052 9.7e-06 55.1 77 37.7
GSVIVG01028812001 Vitis vinifera HOM05D000100 ORTHO05D000052 9.7e-06 55.1 70 44.3


User provided reference genes

Program Settings