Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold17G07933 Striga asiatica HOM05D002544 ORTHO05D399483 1.0e-78 296.6 142 100.0
SGA_v2.0_scaffold45G17141 Striga asiatica HOM05D002544 ORTHO05D007277 1.1e-11 73.9 36 91.7
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 2.7e-10 69.3 79 46.8
Cc07_g13210 Coffea canephora HOM05D002544 ORTHO05D007856 8.6e-09 64.3 36 75.0
Migut.K00933 Erythranthe guttata HOM05D002544 ORTHO05D007856 7.3e-08 61.2 36 72.2
Cfa007785 Carpinus fangiana HOM05D002544 ORTHO05D007856 1.2e-07 60.5 36 66.7
CSS0008925 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 1.6e-07 60.1 36 66.7
CAN.G222.63 Capsicum annuum HOM05D002544 ORTHO05D007856 1.6e-07 60.1 36 66.7
Aqoxy3G04067 Aquilegia oxysepala HOM05D002544 ORTHO05D007856 2.1e-07 59.7 36 66.7
Gohir.A05G287900 Gossypium hirsutum HOM05D002544 ORTHO05D007856 2.1e-07 59.7 35 68.6
Oeu030291.2 Olea europaea HOM05D002544 ORTHO05D007856 2.1e-07 59.7 36 69.4
RcHm_v2.0_Chr3g0492061 Rosa chinensis HOM05D002544 ORTHO05D007856 2.1e-07 59.7 36 69.4
FAN26G1528 Fragaria x ananassa HOM05D002544 ORTHO05D007856 2.8e-07 59.3 41 61.0
unitig_748.g8462 Utricularia gibba HOM05D002544 ORTHO05D007856 4.7e-07 58.5 36 63.9
Prupe.3G165300 Prunus persica HOM05D002544 ORTHO05D007856 6.1e-07 58.2 33 72.7
CiPaw.03G074200 Carya illinoinensis HOM05D002544 ORTHO05D007856 8.0e-07 57.8 36 63.9
GSVIVG01030701001 Vitis vinifera HOM05D002544 ORTHO05D007856 8.0e-07 57.8 33 72.7
COL.COLO4_38545 Corchorus olitorius HOM05D002544 ORTHO05D007856 1.0e-06 57.4 35 65.7
Duzib128G1814 Durio zibethinus HOM05D002544 ORTHO05D007856 1.0e-06 57.4 35 65.7
FvH4_1g30060 Fragaria vesca HOM05D002544 ORTHO05D007856 1.0e-06 57.4 41 58.5
FAN19G2740 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.0e-06 57.4 41 58.5
FAN28G1090 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.0e-06 57.4 41 58.5
Gohir.D05G289100 Gossypium hirsutum HOM05D002544 ORTHO05D007856 1.0e-06 57.4 35 65.7
Gorai.009G304200 Gossypium raimondii HOM05D002544 ORTHO05D007856 1.0e-06 57.4 35 65.7
MD17G1267200 Malus domestica HOM05D002544 ORTHO05D007856 1.0e-06 57.4 33 69.7
Solyc11g011480.2 Solanum lycopersicum HOM05D002544 ORTHO05D007856 1.0e-06 57.4 36 63.9
Sopen11g006270 Solanum pennellii HOM05D002544 ORTHO05D007856 1.0e-06 57.4 36 63.9
CSS0046327 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 1.4e-06 57.0 36 63.9
Nitab4.5_0011135g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 1.4e-06 57.0 36 63.9
Peaxi162Scf00464g00433 Petunia axillaris HOM05D002544 ORTHO05D007856 1.4e-06 57.0 36 61.1
Dinv19050 Davidia involucrata HOM05D002544 ORTHO05D007856 1.8e-06 56.6 33 72.7
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 1.8e-06 56.6 34 67.6
Lj4A258G27 Lonicera japonica HOM05D002544 ORTHO05D007856 1.8e-06 56.6 36 61.1
Nitab4.5_0006562g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 1.8e-06 56.6 36 63.9
QL03p020295 Quercus lobata HOM05D002544 ORTHO05D007856 1.8e-06 56.6 36 66.7
Lalb_Chr18g0053551 Lupinus albus HOM05D002544 ORTHO05D007856 2.3e-06 56.2 35 62.9
Sc04g0005080 Simmondsia chinensis HOM05D002544 ORTHO05D007856 2.3e-06 56.2 35 65.7
SGA_v2.0_scaffold118G32584 Striga asiatica HOM05D002504 ORTHO05D401412 2.3e-06 56.2 59 45.8
TAR622G0658 Trochodendron aralioides HOM05D002544 ORTHO05D007856 2.3e-06 56.2 33 66.7
Lsat_1_v5_gn_3_63981 Lactuca sativa HOM05D002544 ORTHO05D007856 3.0e-06 55.8 36 63.9
Thecc.10G105700 Theobroma cacao HOM05D002544 ORTHO05D007856 5.2e-06 55.1 35 62.9
Zm00001eb382220 Zea mays HOM05D002544 ORTHO05D007856 8.9e-06 54.3 35 62.9


User provided reference genes

Program Settings