Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold17G07917 Striga asiatica HOM05D006114 ORTHO05D007609 4.3e-98 361.3 178 100.0
SGA_v2.0_scaffold41G15724 Striga asiatica HOM05D046054 ORTHO05D007609 5.9e-31 138.3 88 78.4
Migut.N03218 Erythranthe guttata HOM05D006114 ORTHO05D007609 9.7e-18 94.4 199 39.2
SalBow7G1400 Salvia bowleyana HOM05D006114 ORTHO05D007609 3.7e-17 92.4 161 46.0
MSTRG.1356 Avicennia marina HOM05D006114 ORTHO05D007609 8.2e-17 91.3 143 46.9
Migut.C01010 Erythranthe guttata HOM05D006114 ORTHO05D007609 1.8e-16 90.1 147 45.6
unitig_26.g9904 Utricularia gibba HOM05D006114 ORTHO05D007609 2.4e-16 89.7 137 48.2
MSTRG.22368 Avicennia marina HOM05D006114 ORTHO05D007609 3.1e-16 89.4 161 43.5
unitig_749.g13920 Utricularia gibba HOM05D006114 ORTHO05D007609 5.3e-16 88.6 132 49.2
Lsat_1_v5_gn_1_8460 Lactuca sativa HOM05D006114 ORTHO05D007609 2.2e-14 83.2 159 42.8
Oeu032982.1 Olea europaea HOM05D006114 ORTHO05D007609 1.1e-13 80.9 151 42.4
RcHm_v2.0_Chr6g0276341 Rosa chinensis HOM05D006114 ORTHO05D007609 2.7e-12 76.3 155 40.6
Cc10_g14550 Coffea canephora HOM05D006114 ORTHO05D007609 4.7e-12 75.5 143 44.1
MD05G1021300 Malus domestica HOM05D006114 ORTHO05D007609 4.7e-12 75.5 135 43.0
Potri.002G069900 Populus trichocarpa HOM05D006114 ORTHO05D007609 6.1e-12 75.1 157 40.8
Lj2g0010896 Lotus japonicus HOM05D006114 ORTHO05D007609 8.0e-12 74.7 152 40.1
Sed0024386 Sechium edule HOM05D006114 ORTHO05D007609 8.0e-12 74.7 144 39.6
Potri.005G190400 Populus trichocarpa HOM05D006114 ORTHO05D007609 1.0e-11 74.3 155 41.3
Lj7A371T45 Lonicera japonica HOM05D006114 ORTHO05D007609 1.4e-11 73.9 118 42.4
Sabra02G0054600 Salix brachista HOM05D006114 ORTHO05D007609 1.4e-11 73.9 156 40.4
CiPaw.16G014300 Carya illinoinensis HOM05D006114 ORTHO05D007609 1.8e-11 73.6 121 43.8
Dinv41097 Davidia involucrata HOM05D006114 ORTHO05D007609 1.8e-11 73.6 143 43.4
Solyc04g071130.1 Solanum lycopersicum HOM05D006114 ORTHO05D007609 2.3e-11 73.2 165 40.0
Sopen04g027070 Solanum pennellii HOM05D006114 ORTHO05D007609 2.3e-11 73.2 165 40.0
PGSC0003DMG400000797 Solanum tuberosum HOM05D006114 ORTHO05D007609 2.3e-11 73.2 165 40.0
Nitab4.5_0000032g0440 Nicotiana tabacum HOM05D006114 ORTHO05D007609 3.9e-11 72.4 179 38.5
HanXRQChr02g0039921 Helianthus annuus HOM05D006114 ORTHO05D007609 6.7e-11 71.6 138 41.3
MD10G1022100 Malus domestica HOM05D006114 ORTHO05D007609 6.7e-11 71.6 136 41.2
FAN15G0766 Fragaria x ananassa HOM05D006114 ORTHO05D007609 1.1e-10 70.9 130 40.0
Thecc.08G149100 Theobroma cacao HOM05D006114 ORTHO05D007609 1.1e-10 70.9 138 39.1
TWI34G0188 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 1.1e-10 70.9 144 39.6
TAR381G1603 Trochodendron aralioides HOM05D006114 ORTHO05D007609 1.1e-10 70.9 123 43.1
CSS0028797 Camellia sinensis var. sinensis HOM05D006114 ORTHO05D007609 1.5e-10 70.5 161 38.5
Sed0010814 Sechium edule HOM05D006114 ORTHO05D007609 1.5e-10 70.5 116 45.7
PGR042G1057 Punica granatum HOM05D006114 ORTHO05D007609 2.0e-10 70.1 128 43.0
PGR122G0006 Punica granatum HOM05D006114 ORTHO05D007609 2.0e-10 70.1 128 43.0
TWI32G1226 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 2.0e-10 70.1 142 40.8
COL.COLO4_24672 Corchorus olitorius HOM05D006114 ORTHO05D007609 3.3e-10 69.3 139 39.6
Lalb_Chr19g0130321 Lupinus albus HOM05D006114 ORTHO05D007609 3.3e-10 69.3 148 41.9
HPP92_009302 Vanilla planifolia HOM05D006114 ORTHO05D007609 3.3e-10 69.3 136 41.2
Cfa018335 Carpinus fangiana HOM05D006114 ORTHO05D007609 4.4e-10 68.9 96 46.9
DCAR_010096 Daucus carota HOM05D006114 ORTHO05D007609 4.4e-10 68.9 144 37.5
Prupe.8G025000 Prunus persica HOM05D006114 ORTHO05D007609 4.4e-10 68.9 133 40.6
Hma1.2p1_0616F.1_g190010 Hydrangea macrophylla HOM05D006114 ORTHO05D007609 7.4e-10 68.2 151 39.7
Medtr6g034935 Medicago truncatula HOM05D006114 ORTHO05D007609 7.4e-10 68.2 157 35.7
Ah.08g215970 Amaranthus hybridus HOM05D006114 ORTHO05D007609 9.7e-10 67.8 126 40.5
Haze_17740 Corylus avellana HOM05D006114 ORTHO05D007609 9.7e-10 67.8 96 45.8
Glyma.02G083400 Glycine max HOM05D006114 ORTHO05D007609 9.7e-10 67.8 132 40.2
Nn1g06119 Nelumbo nucifera HOM05D006114 ORTHO05D007609 9.7e-10 67.8 140 40.0
AUR62039242 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.3e-09 67.4 137 38.0
CANSAT25G1256 Cannabis sativa HOM05D006114 ORTHO05D007609 1.7e-09 67.0 121 41.3
FvH4_2g14200 Fragaria vesca HOM05D006114 ORTHO05D007609 2.2e-09 66.6 96 43.8
FAN24G0263 Fragaria x ananassa HOM05D006114 ORTHO05D007609 2.2e-09 66.6 96 43.8
BcaB02g07084 Brassica carinata HOM05D006114 ORTHO05D007609 2.8e-09 66.2 144 40.3
BcaC08g45501 Brassica carinata HOM05D006114 ORTHO05D007609 2.8e-09 66.2 134 41.0
Nitab4.5_0006608g0010 Nicotiana tabacum HOM05D006114 ORTHO05D007609 2.8e-09 66.2 178 36.5
A07p28250 Brassica napus HOM05D006114 ORTHO05D007609 3.7e-09 65.9 134 41.0
BraA07t30466Z Brassica rapa HOM05D006114 ORTHO05D007609 3.7e-09 65.9 134 41.0
BcaB05g25019 Brassica carinata HOM05D006114 ORTHO05D007609 4.8e-09 65.5 116 40.5
C06p31720 Brassica napus HOM05D006114 ORTHO05D007609 4.8e-09 65.5 134 41.0
BolC6t38302H Brassica oleracea HOM05D006114 ORTHO05D007609 4.8e-09 65.5 134 41.0
CAN.G175.3 Capsicum annuum HOM05D006114 ORTHO05D007609 4.8e-09 65.5 153 40.5
Ciclev10001576m.g Citrus clementina HOM05D006114 ORTHO05D007609 4.8e-09 65.5 136 37.5
Eucgr.F02716 Eucalyptus grandis HOM05D006114 ORTHO05D007609 4.8e-09 65.5 179 35.2
AL2G37050 Arabidopsis lyrata HOM05D006114 ORTHO05D007609 8.2e-09 64.7 125 40.0
AT1G76920 Arabidopsis thaliana HOM05D006114 ORTHO05D007609 8.2e-09 64.7 125 40.0
Cpa.g.sc21.182 Carica papaya HOM05D006114 ORTHO05D007609 8.2e-09 64.7 124 39.5
Atru.chr13.2189 Acer truncatum HOM05D006114 ORTHO05D007609 1.1e-08 64.3 136 39.0
Duzib041G0274 Durio zibethinus HOM05D006114 ORTHO05D007609 1.4e-08 63.9 97 41.2
Aa31LG4G6950 Aethionema arabicum HOM05D006114 ORTHO05D007609 1.8e-08 63.5 122 40.2
Manes.02G177800 Manihot esculenta HOM05D006114 ORTHO05D007609 1.8e-08 63.5 156 36.5
THA.LOC104813707 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 1.8e-08 63.5 141 39.0
Duzib116G0820 Durio zibethinus HOM05D006114 ORTHO05D007609 2.4e-08 63.2 100 41.0
Gohir.A05G269900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 2.4e-08 63.2 126 39.7
Gohir.D05G271900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 2.4e-08 63.2 126 39.7
Gorai.009G284900 Gossypium raimondii HOM05D006114 ORTHO05D007609 2.4e-08 63.2 126 39.7
QL02p024207 Quercus lobata HOM05D006114 ORTHO05D007609 2.4e-08 63.2 125 40.0
CARHR070420 Cardamine hirsuta HOM05D006114 ORTHO05D007609 3.1e-08 62.8 122 40.2
SpUn0346_0010 Schrenkiella parvula HOM05D006114 ORTHO05D007609 4.1e-08 62.4 123 39.8
Aqoxy5G02132 Aquilegia oxysepala HOM05D006114 ORTHO05D007609 7.0e-08 61.6 164 36.0
Thhalv10019824m.g Eutrema salsugineum HOM05D006114 ORTHO05D007609 1.2e-07 60.8 123 39.8
Hund26709 Selenicereus undatus HOM05D006114 ORTHO05D000105 1.2e-07 60.8 152 34.9
THA.LOC104812044 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 1.2e-07 60.8 146 38.4
Carub.0002s2378 Capsella rubella HOM05D006114 ORTHO05D007609 2.0e-07 60.1 127 38.6
Rhsim05G0182400 Rhododendron simsii HOM05D006114 ORTHO05D007609 2.0e-07 60.1 148 35.1
Actinidia15143 Actinidia chinensis HOM05D006114 ORTHO05D007609 7.7e-07 58.2 156 35.3
EL10Ac7g15790 Beta vulgaris HOM05D006114 ORTHO05D007609 1.3e-06 57.4 148 36.5
TAR625G1556 Trochodendron aralioides HOM05D006114 ORTHO05D007609 1.7e-06 57.0 118 41.5
Ca_27292_v3 Cicer arietinum L. HOM05D006114 ORTHO05D007609 2.2e-06 56.6 143 35.0
MBI17_g34067_MAGBIO Magnolia biondii HOM05D006114 ORTHO05D007609 5.0e-06 55.5 156 34.0
FvH4_6g34681 Fragaria vesca HOM05D006114 ORTHO05D007609 8.5e-06 54.7 57 49.1
Phvul.004G097500 Phaseolus vulgaris HOM05D006114 ORTHO05D007609 8.5e-06 54.7 126 37.3


User provided reference genes

Program Settings