Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold17G07915 Striga asiatica HOM05D008624 ORTHO05D011001 8.9e-142 507.3 329 100.0
SGA_v2.0_scaffold17G07912 Striga asiatica HOM05D008624 ORTHO05D011001 2.0e-77 293.5 275 60.0
SGA_v2.0_scaffold51G18794 Striga asiatica HOM05D008624 ORTHO05D011001 4.2e-67 259.2 325 49.8
SGA_v2.0_scaffold51G18799 Striga asiatica HOM05D008624 ORTHO05D011001 3.8e-60 236.1 267 53.2
SGA_v2.0_scaffold778G53583 Striga asiatica HOM05D008624 ORTHO05D011001 4.2e-59 232.6 294 49.0
SGA_v2.0_scaffold51G18798 Striga asiatica HOM05D008624 ORTHO05D011001 4.1e-54 216.1 310 45.5
FAN07G0473 Fragaria x ananassa HOM05D008624 ORTHO05D011001 2.3e-17 94.0 114 40.4
FvH4_4g24132 Fragaria vesca HOM05D008624 ORTHO05D011001 4.0e-17 93.2 114 39.5
SGA_v2.0_scaffold418G51272 Striga asiatica HOM05D031175 ORTHO05D030682 8.9e-17 92.0 128 43.0
SGA_v2.0_scaffold475G52112 Striga asiatica HOM05D031175 ORTHO05D030682 8.9e-17 92.0 128 43.0
SGA_v2.0_scaffold475G52115 Striga asiatica HOM05D031175 ORTHO05D030682 8.9e-17 92.0 128 43.0
RcHm_v2.0_Chr5g0058501 Rosa chinensis HOM05D008624 ORTHO05D011001 2.6e-16 90.5 113 42.5
FAN12G3911 Fragaria x ananassa HOM05D008624 ORTHO05D011001 7.5e-16 89.0 115 39.1
FAN15G2936 Fragaria x ananassa HOM05D008624 ORTHO05D011001 2.9e-15 87.0 110 42.7
FAN15G3684 Fragaria x ananassa HOM05D008624 ORTHO05D011001 2.9e-15 87.0 110 42.7
FvH4_2g07000 Fragaria vesca HOM05D008624 ORTHO05D011001 3.7e-15 86.7 110 41.8
FAN15G1633 Fragaria x ananassa HOM05D008624 ORTHO05D011001 3.7e-15 86.7 110 41.8
FAN15G3060 Fragaria x ananassa HOM05D008624 ORTHO05D011001 6.4e-15 85.9 118 41.5
FvH4_4g36141 Fragaria vesca HOM05D008624 ORTHO05D011001 3.2e-14 83.6 113 38.9
FAN12G1209 Fragaria x ananassa HOM05D008624 ORTHO05D011001 3.2e-14 83.6 113 38.9
FAN07G0895 Fragaria x ananassa HOM05D008624 ORTHO05D011001 4.1e-14 83.2 118 38.1
FAN17G0739 Fragaria x ananassa HOM05D008624 ORTHO05D011001 9.2e-14 82.0 114 36.0
FAN22G0543 Fragaria x ananassa HOM05D008624 ORTHO05D011001 3.5e-13 80.1 118 37.3
FvH4_4g36220 Fragaria vesca HOM05D008624 ORTHO05D011001 1.3e-12 78.2 177 29.4
FAN06G0988 Fragaria x ananassa HOM05D008624 ORTHO05D011001 1.3e-12 78.2 104 42.3
FvH4_4g12110 Fragaria vesca HOM05D008624 ORTHO05D011001 8.6e-12 75.5 112 40.2
FAN12G4261 Fragaria x ananassa HOM05D008624 ORTHO05D011001 8.6e-12 75.5 112 40.2
FAN06G4950 Fragaria x ananassa HOM05D008624 ORTHO05D011001 1.9e-11 74.3 109 40.4
FAN12G1756 Fragaria x ananassa HOM05D008624 ORTHO05D011001 3.3e-11 73.6 167 29.9
FAN12G1889 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.3e-11 72.4 86 39.5
FAN07G2663 Fragaria x ananassa HOM05D008624 ORTHO05D011001 1.6e-10 71.2 131 32.8
FAN24G0156 Fragaria x ananassa HOM05D008624 ORTHO05D011001 2.0e-08 64.3 117 36.8
SGA_v2.0_scaffold350G49626 Striga asiatica HOM05D031175 ORTHO05D030682 2.9e-07 60.5 297 26.6


User provided reference genes

Program Settings