Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold17G07909 Striga asiatica HOM05D005586 ORTHO05D007044 0.0e+00 1451.8 736 100.0
MSTRG.6212 Avicennia marina HOM05D005586 ORTHO05D007044 1.8e-288 995.7 631 81.8
Oeu025223.1 Olea europaea HOM05D005586 ORTHO05D007044 2.2e-281 972.2 636 78.3
Migut.J01477 Erythranthe guttata HOM05D005586 ORTHO05D007044 2.7e-279 965.3 632 78.2
Oeu009835.1 Olea europaea HOM05D005586 ORTHO05D007044 8.6e-270 933.7 636 75.9
Peaxi162Scf00231g00064 Petunia axillaris HOM05D005586 ORTHO05D007044 1.9e-261 906.0 639 74.8
Nitab4.5_0000730g0080 Nicotiana tabacum HOM05D005586 ORTHO05D007044 8.9e-259 897.1 639 74.2
Lj9P685T24 Lonicera japonica HOM05D005586 ORTHO05D007044 9.8e-258 893.6 631 72.9
Dinv41251 Davidia involucrata HOM05D005586 ORTHO05D007044 2.9e-257 892.1 633 73.5
Solyc10g078790.1 Solanum lycopersicum HOM05D005586 ORTHO05D007044 4.9e-257 891.3 637 73.6
PGSC0003DMG400011415 Solanum tuberosum HOM05D005586 ORTHO05D007044 6.4e-257 891.0 637 73.8
Sopen10g029410 Solanum pennellii HOM05D005586 ORTHO05D007044 1.4e-256 889.8 637 73.5
Nitab4.5_0004134g0010 Nicotiana tabacum HOM05D005586 ORTHO05D007044 2.4e-256 889.0 644 73.4
Nitab4.5_0000455g0040 Nicotiana tabacum HOM05D005586 ORTHO05D007044 3.2e-256 888.6 638 74.0
Cc06_g13260 Coffea canephora HOM05D005586 ORTHO05D007044 7.8e-255 884.0 634 73.7
CAN.G1161.32 Capsicum annuum HOM05D005586 ORTHO05D007044 6.6e-254 880.9 645 73.0
Dinv25464 Davidia involucrata HOM05D005586 ORTHO05D007044 2.1e-252 875.9 651 70.8
CSS0030464 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 1.8e-251 872.8 637 71.0
Rhsim07G0149700 Rhododendron simsii HOM05D005586 ORTHO05D007044 1.7e-249 866.3 646 70.4
DCAR_017968 Daucus carota HOM05D005586 ORTHO05D007044 1.1e-248 863.6 630 72.2
CSS0000496 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 9.6e-245 850.5 637 69.9
TWI60G0698 Tripterygium wilfordii HOM05D005586 ORTHO05D007044 6.2e-244 847.8 646 69.7
ClCG06G013320 Citrullus lanatus HOM05D005586 ORTHO05D007044 4.0e-243 845.1 640 70.2
Atru.chr7.639 Acer truncatum HOM05D005586 ORTHO05D007044 5.2e-243 844.7 639 69.5
Sed0005590 Sechium edule HOM05D005586 ORTHO05D007044 9.9e-242 840.5 640 69.4
ECA234G4574 Erigeron canadensis HOM05D005586 ORTHO05D007044 1.7e-241 839.7 633 71.2
Duzib168G0896 Durio zibethinus HOM05D005586 ORTHO05D007044 4.9e-241 838.2 639 69.2
SalBow1G5715 Salvia bowleyana HOM05D005586 ORTHO05D007044 6.4e-241 837.8 632 72.2
MELO3C017465.2 Cucumis melo HOM05D005586 ORTHO05D007044 1.1e-240 837.0 640 69.2
Lj7P472T26 Lonicera japonica HOM05D005586 ORTHO05D007044 1.6e-239 833.2 633 69.4
CsaV3_1G031580 Cucumis sativus L. HOM05D005586 ORTHO05D007044 4.6e-239 831.6 641 69.0
Lsat_1_v5_gn_5_84680 Lactuca sativa HOM05D005586 ORTHO05D007044 7.8e-239 830.9 635 70.9
SalBow6G0691 Salvia bowleyana HOM05D005586 ORTHO05D007044 7.8e-239 830.9 629 70.6
Lj4g0013239 Lotus japonicus HOM05D005586 ORTHO05D007044 1.0e-238 830.5 634 68.5
Prupe.2G007900 Prunus persica HOM05D005586 ORTHO05D007044 3.0e-238 828.9 648 67.6
Potri.006G168200 Populus trichocarpa HOM05D005586 ORTHO05D007044 7.3e-237 824.3 652 67.3
TAR383G0761 Trochodendron aralioides HOM05D005586 ORTHO05D007044 4.8e-236 821.6 638 68.8
CANSAT11G2700 Cannabis sativa HOM05D005586 ORTHO05D007044 6.2e-236 821.2 638 68.0
Gohir.A08G084500 Gossypium hirsutum HOM05D005586 ORTHO05D007044 8.1e-236 820.8 643 67.0
COL.COLO4_33680 Corchorus olitorius HOM05D005586 ORTHO05D007044 2.4e-235 819.3 638 67.4
FAN18G4074 Fragaria x ananassa HOM05D005586 ORTHO05D007044 3.1e-235 818.9 641 68.2
Glyma.17G063500 Glycine max HOM05D005586 ORTHO05D007044 3.1e-235 818.9 634 67.5
Hma1.2p1_1025F.1_g249260 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 3.1e-235 818.9 592 72.5
Gorai.004G099900 Gossypium raimondii HOM05D005586 ORTHO05D007044 4.0e-235 818.5 646 67.2
CiPaw.07G192200 Carya illinoinensis HOM05D005586 ORTHO05D007044 6.9e-235 817.8 641 67.7
FvH4_5g27790 Fragaria vesca HOM05D005586 ORTHO05D007044 6.9e-235 817.8 641 68.0
Cpa.g.sc95.50 Carica papaya HOM05D005586 ORTHO05D007044 9.0e-235 817.4 633 68.7
Ciclev10007551m.g Citrus clementina HOM05D005586 ORTHO05D007044 9.0e-235 817.4 641 67.4
Ca_21173_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 1.2e-234 817.0 634 67.2
Ca_21222_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 1.2e-234 817.0 634 67.2
FAN08G2362 Fragaria x ananassa HOM05D005586 ORTHO05D007044 1.2e-234 817.0 639 68.2
RcHm_v2.0_Chr4g0402481 Rosa chinensis HOM05D005586 ORTHO05D007044 2.6e-234 815.8 640 67.5
Medtr4g128210 Medicago truncatula HOM05D005586 ORTHO05D007044 3.4e-234 815.5 632 67.1
Sabra06G0129800 Salix brachista HOM05D005586 ORTHO05D007044 3.4e-234 815.5 652 67.0
Sed0016049 Sechium edule HOM05D005586 ORTHO05D007044 3.4e-234 815.5 641 68.0
Lalb_Chr12g0199381 Lupinus albus HOM05D005586 ORTHO05D007044 1.7e-233 813.1 636 67.1
Thecc.09G173100 Theobroma cacao HOM05D005586 ORTHO05D007044 1.7e-233 813.1 632 68.2
Glyma.20G083600 Glycine max HOM05D005586 ORTHO05D007044 6.4e-233 811.2 633 67.5
TAR626G0800 Trochodendron aralioides HOM05D005586 ORTHO05D007044 8.4e-233 810.8 633 67.3
Aqoxy7G02326 Aquilegia oxysepala HOM05D005586 ORTHO05D007044 1.1e-232 810.4 634 67.4
Aa31LG3G13340 Aethionema arabicum HOM05D005586 ORTHO05D007044 3.2e-232 808.9 642 67.3
arahy.Tifrunner.gnm1.ann1.F5X18S Arachis hypogaea HOM05D005586 ORTHO05D007044 5.4e-232 808.1 637 67.0
VMungo1215G0758 Vigna mungo HOM05D005586 ORTHO05D007044 9.3e-232 807.4 628 67.5
PSO170G6484 Papaver somniferum HOM05D005586 ORTHO05D007044 2.7e-231 805.8 634 67.2
Psat0s509g0200 Pisum sativum HOM05D005586 ORTHO05D007044 1.3e-230 803.5 629 66.3
Haze_22099 Corylus avellana HOM05D005586 ORTHO05D007044 1.7e-230 803.1 639 67.0
Ah.14g083790 Amaranthus hybridus HOM05D005586 ORTHO05D007044 2.3e-230 802.7 639 66.7
Cfa013507 Carpinus fangiana HOM05D005586 ORTHO05D007044 2.3e-230 802.7 641 66.8
QL02p097708 Quercus lobata HOM05D005586 ORTHO05D007044 3.0e-230 802.4 642 66.5
Phvul.003G146100 Phaseolus vulgaris HOM05D005586 ORTHO05D007044 3.9e-230 802.0 632 66.6
Manes.14G153700 Manihot esculenta HOM05D005586 ORTHO05D007044 8.7e-230 800.8 649 65.3
Nn4g25000 Nelumbo nucifera HOM05D005586 ORTHO05D007044 8.7e-230 800.8 623 68.2
Eucgr.C02307 Eucalyptus grandis HOM05D005586 ORTHO05D007044 1.9e-229 799.7 643 65.9
PGR102G3328 Punica granatum HOM05D005586 ORTHO05D007044 3.3e-229 798.9 633 67.6
BcaB01g04458 Brassica carinata HOM05D005586 ORTHO05D007044 7.3e-229 797.7 644 66.6
PSO063G4043 Papaver somniferum HOM05D005586 ORTHO05D007044 7.3e-229 797.7 634 66.6
BcaB08g36100 Brassica carinata HOM05D005586 ORTHO05D007044 2.8e-228 795.8 644 67.5
THA.LOC104811789 Tarenaya hassleriana HOM05D005586 ORTHO05D007044 8.1e-228 794.3 643 65.8
A03p12820 Brassica napus HOM05D005586 ORTHO05D007044 6.9e-227 791.2 645 66.0
C03p14980 Brassica napus HOM05D005586 ORTHO05D007044 9.0e-227 790.8 647 66.0
BolC3t13940H Brassica oleracea HOM05D005586 ORTHO05D007044 1.2e-226 790.4 646 65.9
BraA03t10590Z Brassica rapa HOM05D005586 ORTHO05D007044 1.2e-226 790.4 644 66.0
BraA10t43568Z Brassica rapa HOM05D005586 ORTHO05D007044 2.0e-226 789.6 641 67.7
CARHR271250 Cardamine hirsuta HOM05D005586 ORTHO05D007044 2.0e-226 789.6 653 65.4
Sp6g19170 Schrenkiella parvula HOM05D005586 ORTHO05D007044 3.4e-226 788.9 644 66.3
BcaC01g06487 Brassica carinata HOM05D005586 ORTHO05D007044 4.5e-226 788.5 644 66.1
C09p49310 Brassica napus HOM05D005586 ORTHO05D007044 1.7e-225 786.6 647 66.2
MD13G1254800 Malus domestica HOM05D005586 ORTHO05D007044 2.9e-225 785.8 640 65.6
AL8G33420 Arabidopsis lyrata HOM05D005586 ORTHO05D007044 4.9e-225 785.0 646 66.3
BcaC04g19966 Brassica carinata HOM05D005586 ORTHO05D007044 6.4e-225 784.6 649 65.8
AT5G57460 Arabidopsis thaliana HOM05D005586 ORTHO05D007044 1.4e-224 783.5 650 65.4
Sc08g0005320 Simmondsia chinensis HOM05D005586 ORTHO05D007044 1.4e-224 783.5 632 66.0
Carub.0008s1797 Capsella rubella HOM05D005586 ORTHO05D007044 5.5e-224 781.6 648 65.4
MBI03_g13495_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 1.2e-223 780.4 634 65.0
EL10Ac8g18286 Beta vulgaris HOM05D005586 ORTHO05D007044 1.6e-223 780.0 648 64.7
A10p14890 Brassica napus HOM05D005586 ORTHO05D007044 3.5e-223 778.9 644 66.1
Aa31LG3G220 Aethionema arabicum HOM05D005586 ORTHO05D007044 1.8e-222 776.5 639 65.9
Thhalv10015707m.g Eutrema salsugineum HOM05D005586 ORTHO05D007044 2.3e-222 776.2 645 64.8
GSVIVG01029208001 Vitis vinifera HOM05D005586 ORTHO05D007044 6.9e-219 764.6 632 65.7
BolC9t57782H Brassica oleracea HOM05D005586 ORTHO05D007044 6.5e-217 758.1 647 64.8
TPR.G5407 Trifolium pratense HOM05D005586 ORTHO05D007044 1.5e-213 746.9 584 65.9
SHI41749 Sapria himalayana HOM05D005586 ORTHO05D007044 1.9e-213 746.5 644 62.1
Gohir.D08G094100 Gossypium hirsutum HOM05D005586 ORTHO05D007044 2.1e-212 743.0 646 62.5
CDE04G2484 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 2.4e-211 739.6 639 62.0
MBI14_g17367_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 1.9e-208 729.9 631 61.6
Actinidia15717 Actinidia chinensis HOM05D005586 ORTHO05D007044 3.5e-207 725.7 622 63.3
PSO541G5977 Papaver somniferum HOM05D005586 ORTHO05D007044 2.8e-204 716.1 643 60.0
AUR62021301 Chenopodium quinoa HOM05D005586 ORTHO05D007044 4.5e-202 708.8 636 60.7
AUR62033219 Chenopodium quinoa HOM05D005586 ORTHO05D007044 1.0e-201 707.6 636 60.4
MD13G1254300 Malus domestica HOM05D005586 ORTHO05D007044 1.1e-197 694.1 646 60.4
ATR0618G120 Amborella trichopoda HOM05D005586 ORTHO05D007044 7.4e-197 691.4 635 59.4
Actinidia14649 Actinidia chinensis HOM05D005586 ORTHO05D007044 3.7e-196 689.1 536 68.3
MBI18_g04576_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 2.4e-187 659.8 634 58.0
Zm00001eb414690 Zea mays HOM05D005586 ORTHO05D007044 9.1e-187 657.9 637 58.7
Hma1.2p1_3184F.1_g333760 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 4.7e-183 645.6 637 58.6
Os08g0243900 Oryza sativa ssp. japonica HOM05D005586 ORTHO05D007044 8.8e-182 641.3 638 56.7
SEGI_38070 Sequoiadendron giganteum HOM05D005586 ORTHO05D007044 5.3e-179 632.1 634 56.2
BcaC01g06491 Brassica carinata HOM05D005586 ORTHO05D007044 3.7e-164 582.8 624 54.6
MBI16_g35931_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 3.6e-159 566.2 543 58.0
CDE02G2425 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 7.8e-154 548.5 637 51.3
Mapoly0111s0055 Marchantia polymorpha HOM05D005586 ORTHO05D007044 5.8e-141 505.8 666 46.7
BcaC01g06494 Brassica carinata HOM05D005586 ORTHO05D007044 2.1e-138 497.3 620 50.6
unitig_899.g14852 Utricularia gibba HOM05D005586 ORTHO05D007044 1.0e-137 495.0 321 81.3
Pp3c25_4850 Physcomitrium patens HOM05D005586 ORTHO05D007044 6.4e-132 475.7 660 43.6
AagrBONN_evm.TU.Sc2ySwM_368.670 Anthoceros agrestis HOM05D005586 ORTHO05D007044 1.7e-121 441.0 666 41.7
COL.COLO4_04392 Corchorus olitorius HOM05D005586 ORTHO05D007044 5.8e-101 372.9 342 59.1
unitig_899.g14851 Utricularia gibba HOM05D005586 ORTHO05D007044 1.8e-94 351.3 234 73.9
SMO228G0090 Selaginella moellendorffii HOM05D005586 ORTHO05D007044 8.2e-87 325.9 381 49.9
HPP92_000781 Vanilla planifolia HOM05D005586 ORTHO05D007044 4.1e-62 243.8 298 48.0
CBR_g26159 Chara braunii HOM05D005586 ORTHO05D000002 2.0e-40 171.8 542 29.7
QL11p053068 Quercus lobata HOM05D005586 ORTHO05D007044 8.3e-39 166.4 114 75.4
MD16G1258000 Malus domestica HOM05D005586 ORTHO05D007044 2.0e-32 145.2 118 61.0
Oeu013635.1 Olea europaea HOM05D006172 ORTHO05D005515 3.2e-22 111.3 91 61.5
MD16G1258100 Malus domestica HOM05D005586 ORTHO05D007044 3.5e-21 107.8 112 50.0
MBI16_g35933_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009834 2.8e-10 71.6 41 82.9
CBR_g26157 Chara braunii HOM05D005586 ORTHO05D007044 6.2e-10 70.5 104 43.3
SalBow4G0612 Salvia bowleyana HOM05D005586 ORTHO05D360416 8.1e-10 70.1 46 69.6
MBI16_g35934_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 1.1e-06 59.7 51 51.0


User provided reference genes

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