Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 6.4e-103 377.5 198 100.0
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 1.7e-87 326.2 198 85.4
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 4.2e-86 321.6 201 82.1
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 1.9e-83 312.8 175 86.9
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 1.9e-83 312.8 175 86.9
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 3.3e-83 312.0 175 86.3
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 3.6e-82 308.5 199 81.4
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 1.2e-80 303.5 199 80.9
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 1.5e-80 303.1 182 83.5
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 2.0e-80 302.8 203 77.3
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 2.6e-80 302.4 175 85.7
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 2.6e-80 302.4 175 85.7
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 2.6e-80 302.4 175 85.7
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 4.4e-80 301.6 202 76.2
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 1.3e-79 300.1 203 76.8
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 8.4e-79 297.4 177 84.2
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 2.4e-78 295.8 201 75.6
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 3.2e-78 295.4 175 85.1
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 3.2e-78 295.4 203 77.3
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 3.2e-78 295.4 206 74.3
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 4.2e-78 295.0 204 75.0
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 5.4e-78 294.7 176 83.5
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 7.1e-78 294.3 203 77.3
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 1.2e-77 293.5 201 75.1
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 1.2e-77 293.5 199 74.4
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 1.6e-77 293.1 202 76.2
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 2.1e-77 292.7 181 83.4
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 2.7e-77 292.4 167 86.2
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 3.5e-77 292.0 201 77.1
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 3.5e-77 292.0 204 76.5
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 6.0e-77 291.2 204 76.0
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 6.0e-77 291.2 204 76.0
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 6.0e-77 291.2 178 83.7
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 7.9e-77 290.8 202 76.2
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.0e-76 290.4 204 76.0
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.0e-76 290.4 202 75.2
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.0e-76 290.4 202 75.2
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 2.3e-76 289.3 178 83.1
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.3e-76 289.3 204 75.5
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 2.3e-76 289.3 176 82.4
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 3.0e-76 288.9 204 75.5
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 3.0e-76 288.9 201 74.1
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 3.9e-76 288.5 176 82.4
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 3.9e-76 288.5 183 81.4
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 5.1e-76 288.1 202 75.7
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 5.1e-76 288.1 178 80.3
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 6.6e-76 287.7 176 81.2
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 6.6e-76 287.7 207 76.3
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 2.5e-75 285.8 207 73.4
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 3.3e-75 285.4 191 79.1
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 4.3e-75 285.0 201 74.1
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 5.6e-75 284.6 179 80.4
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 9.6e-75 283.9 181 79.0
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 9.6e-75 283.9 179 78.2
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 9.6e-75 283.9 176 80.1
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 1.3e-74 283.5 201 73.1
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 1.6e-74 283.1 176 81.8
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 3.6e-74 282.0 209 72.7
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 4.8e-74 281.6 199 74.4
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 6.2e-74 281.2 179 78.8
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 1.1e-73 280.4 207 72.0
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.8e-73 279.6 174 78.2
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 1.8e-73 279.6 176 79.0
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 1.8e-73 279.6 207 72.0
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 4.0e-73 278.5 176 79.0
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 2.6e-72 275.8 201 71.6
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 2.6e-72 275.8 199 74.4
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 1.3e-71 273.5 175 76.6
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 3.2e-70 268.9 172 77.3
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 1.6e-69 266.5 174 76.4
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 6.0e-69 264.6 215 67.4
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 6.0e-69 264.6 200 69.0
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 3.0e-68 262.3 176 75.0
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 3.0e-68 262.3 187 70.6
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 3.0e-68 262.3 187 70.6
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 6.7e-68 261.2 178 75.8
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 2.5e-67 259.2 172 73.3
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 4.8e-66 255.0 170 77.1
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 3.1e-65 252.3 186 70.4
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 5.3e-65 251.5 172 74.4
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 6.9e-65 251.1 186 69.9
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 6.9e-65 251.1 186 69.9
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 6.9e-65 251.1 186 69.9
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 6.9e-65 251.1 186 69.9
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 1.2e-64 250.4 180 73.3
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 1.5e-64 250.0 176 79.0
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 3.4e-64 248.8 190 68.4
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 5.8e-64 248.1 183 69.9
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 5.8e-64 248.1 183 69.9
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 7.6e-64 247.7 187 68.4
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 7.6e-64 247.7 189 68.3
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 7.6e-64 247.7 189 68.3
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 7.6e-64 247.7 214 62.1
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 1.7e-63 246.5 183 69.9
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 7.1e-62 241.1 176 71.0
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 4.3e-59 231.9 189 65.6
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 2.1e-58 229.6 165 69.7
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 8.2e-58 227.6 150 75.3
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 3.1e-49 199.1 175 57.7
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 1.5e-48 196.8 173 65.3
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 4.2e-46 188.7 105 84.8
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 9.4e-46 187.6 175 54.3
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 1.6e-45 186.8 143 67.1
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 7.9e-45 184.5 105 82.9
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 6.7e-44 181.4 173 53.2
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.5e-40 170.2 192 45.8
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 3.4e-40 169.1 172 55.8
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 5.9e-40 168.3 98 84.7
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 7.7e-32 141.4 170 51.2
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 7.7e-32 141.4 119 59.7
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 2.9e-23 112.8 131 49.6
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 6.8e-20 101.7 68 72.1
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.9e-14 83.6 63 69.8
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 2.2e-10 70.1 46 71.7
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 1.2e-08 64.3 39 84.6
Nn8g39713 Nelumbo nucifera HOM05D006880 ORTHO05D008638 3.3e-06 56.2 33 75.8


User provided reference genes

Program Settings