Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 4.6e-269 930.6 471 100.0
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 1.5e-155 553.5 362 77.9
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 1.7e-149 533.5 367 74.1
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 7.0e-148 528.1 362 75.7
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 1.7e-146 523.5 369 72.9
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 3.9e-143 512.3 371 70.4
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 1.5e-142 510.4 368 71.2
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 3.3e-142 509.2 371 71.2
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 1.3e-141 507.3 375 71.2
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 6.3e-141 505.0 369 69.9
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.8e-140 503.4 372 70.4
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 2.4e-140 503.1 372 70.2
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 1.2e-139 500.7 360 70.6
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 2.0e-139 500.0 285 83.2
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 2.0e-139 500.0 369 69.4
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 4.5e-139 498.8 370 70.5
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 1.0e-138 497.7 306 77.5
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 1.7e-138 496.9 288 81.2
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 2.9e-138 496.1 375 69.9
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 6.5e-138 495.0 358 68.4
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 8.5e-138 494.6 302 79.8
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 8.5e-138 494.6 351 70.9
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 1.5e-137 493.8 357 70.6
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 1.5e-137 493.8 283 83.0
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 1.9e-137 493.4 360 70.0
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 1.9e-137 493.4 369 69.1
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.2e-137 492.7 351 70.7
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.2e-137 492.7 351 70.7
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 4.2e-137 492.3 289 81.3
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 4.2e-137 492.3 299 80.9
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 5.5e-137 491.9 373 68.9
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 5.5e-137 491.9 373 67.6
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 5.5e-137 491.9 366 69.7
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 7.2e-137 491.5 376 68.4
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 9.4e-137 491.1 351 70.4
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 9.4e-137 491.1 305 78.0
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 9.4e-137 491.1 289 81.3
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 1.2e-136 490.7 369 69.1
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.2e-136 490.7 373 67.0
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 1.6e-136 490.3 361 69.3
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 1.6e-136 490.3 373 67.3
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 2.7e-136 489.6 303 78.5
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 4.7e-136 488.8 372 67.7
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 1.0e-135 487.6 340 71.2
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 1.0e-135 487.6 340 71.2
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.0e-135 487.6 360 69.7
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 1.4e-135 487.3 289 80.3
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 1.4e-135 487.3 348 70.7
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 1.4e-135 487.3 348 70.7
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 1.4e-135 487.3 306 77.8
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 1.8e-135 486.9 285 82.8
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 2.3e-135 486.5 316 73.7
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 2.3e-135 486.5 374 68.4
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 3.0e-135 486.1 359 68.5
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 4.0e-135 485.7 368 67.1
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 5.2e-135 485.3 375 66.7
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 6.7e-135 485.0 376 67.6
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 6.7e-135 485.0 289 81.0
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 1.2e-134 484.2 306 78.1
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 2.6e-134 483.0 304 77.3
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 2.6e-134 483.0 421 63.4
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 2.6e-134 483.0 312 77.2
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 3.3e-134 482.6 289 79.2
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 3.3e-134 482.6 292 79.8
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 7.5e-134 481.5 374 67.9
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 9.7e-134 481.1 308 75.3
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 1.7e-133 480.3 363 66.9
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 4.8e-133 478.8 368 67.1
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 4.8e-133 478.8 360 68.3
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 1.1e-132 477.6 375 67.2
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 1.8e-132 476.9 348 69.8
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 4.1e-132 475.7 292 78.8
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 4.1e-132 475.7 284 81.3
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 9.1e-132 474.6 284 81.0
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 9.1e-132 474.6 289 76.8
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 2.7e-131 473.0 286 79.4
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 1.0e-130 471.1 288 77.4
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 1.7e-130 470.3 289 78.2
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 2.2e-130 469.9 286 78.7
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 3.8e-130 469.2 304 76.3
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 5.0e-130 468.8 286 80.1
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 3.2e-129 466.1 308 71.8
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 1.6e-128 463.8 368 65.2
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 4.7e-128 462.2 309 72.2
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 4.7e-128 462.2 356 66.6
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 1.0e-127 461.1 311 72.3
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 1.4e-127 460.7 284 76.8
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 1.8e-127 460.3 284 76.4
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 5.2e-127 458.8 283 75.3
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.2e-126 457.6 337 68.5
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 2.8e-125 453.0 424 59.0
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 3.7e-125 452.6 378 63.8
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 4.1e-124 449.1 280 76.1
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 4.1e-124 449.1 288 75.0
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 1.2e-120 437.6 371 61.7
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 2.8e-120 436.4 360 63.6
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.5e-118 430.6 335 67.5
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.5e-118 430.6 356 61.5
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 9.8e-118 427.9 357 61.3
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.1e-116 424.5 287 69.3
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 3.1e-116 422.9 283 70.0
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 1.5e-113 414.1 283 68.2
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 3.1e-111 406.4 222 87.8
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 1.5e-110 404.1 309 63.4
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.5e-110 404.1 286 67.5
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 9.2e-100 368.2 427 51.3
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 4.3e-89 332.8 297 57.6
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 4.3e-89 332.8 252 66.7
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 1.4e-87 327.8 175 86.9
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 3.9e-82 309.7 269 62.8
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 1.2e-78 298.1 208 66.8
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 1.7e-77 294.3 276 60.9
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 2.2e-77 293.9 259 61.8
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 4.2e-76 289.7 181 78.5
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 1.4e-71 274.6 188 72.3
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 2.5e-65 253.8 284 52.1
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.7e-48 196.8 242 48.3
SGA_v2.0_scaffold220G42613 Striga asiatica HOM05D015252 ORTHO05D002765 5.7e-25 119.8 99 59.6
SGA_v2.0_scaffold10G05133 Striga asiatica HOM05D015252 ORTHO05D002765 8.5e-21 105.9 107 46.7
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 2.5e-20 104.4 94 56.4
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 4.2e-20 103.6 154 46.1
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 2.7e-19 100.9 154 46.8
SGA_v2.0_scaffold106G30719 Striga asiatica HOM05D015252 ORTHO05D002765 3.6e-19 100.5 87 52.9
SGA_v2.0_scaffold16G07749 Striga asiatica HOM05D015252 ORTHO05D002765 6.8e-18 96.3 89 51.7
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.2e-16 91.3 73 65.8
SGA_v2.0_scaffold78G25421 Striga asiatica HOM05D015252 ORTHO05D002765 3.0e-10 70.9 53 50.9
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 5.2e-10 70.1 36 80.6


User provided reference genes

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