Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold177G39437 Striga asiatica HOM05D003565 ORTHO05D003943 1.0e-79 300.1 155 100.0
Migut.N02472 Erythranthe guttata HOM05D003565 ORTHO05D003943 7.3e-38 161.0 155 59.4
Oeu027151.1 Olea europaea HOM05D003565 ORTHO05D003943 9.0e-28 127.5 147 51.7
Oeu027152.1 Olea europaea HOM05D003565 ORTHO05D003943 2.5e-25 119.4 147 49.0
CAN.G261.3 Capsicum annuum HOM05D003565 ORTHO05D003943 1.0e-15 87.4 153 41.2
Potri.010G012400 Populus trichocarpa HOM05D003565 ORTHO05D003943 2.3e-15 86.3 135 39.3
CiPaw.02G059300 Carya illinoinensis HOM05D003565 ORTHO05D003943 5.1e-15 85.1 129 38.0
Oeu064291.1 Olea europaea HOM05D003565 ORTHO05D003943 5.1e-15 85.1 153 35.9
CiPaw.02G059200 Carya illinoinensis HOM05D003565 ORTHO05D003943 1.9e-14 83.2 125 38.4
Cfa015405 Carpinus fangiana HOM05D003565 ORTHO05D003943 3.3e-14 82.4 145 34.5
Hma1.2p1_1807F.1_g303350 Hydrangea macrophylla HOM05D003565 ORTHO05D003943 3.3e-14 82.4 153 37.3
Dinv29764 Davidia involucrata HOM05D003565 ORTHO05D003943 9.7e-14 80.9 147 34.7
Cpa.g.sc16.191 Carica papaya HOM05D003565 ORTHO05D003943 1.6e-13 80.1 149 34.2
PSO210G5566 Papaver somniferum HOM05D003565 ORTHO05D003943 2.8e-13 79.3 147 34.7
PGSC0003DMG400011334 Solanum tuberosum HOM05D003565 ORTHO05D003943 2.8e-13 79.3 146 38.4
Migut.O00777 Erythranthe guttata HOM05D003565 ORTHO05D003943 3.7e-13 79.0 123 39.0
Sabra10G0007900 Salix brachista HOM05D003565 ORTHO05D003943 3.7e-13 79.0 152 34.9
Cfa021269 Carpinus fangiana HOM05D003565 ORTHO05D003943 4.8e-13 78.6 146 34.2
Peaxi162Scf00246g01219 Petunia axillaris HOM05D003565 ORTHO05D003943 6.3e-13 78.2 152 39.5
PGR004G2879 Punica granatum HOM05D003565 ORTHO05D003943 6.3e-13 78.2 152 34.9
SalBow2G0621 Salvia bowleyana HOM05D003565 ORTHO05D003943 6.3e-13 78.2 123 38.2
Actinidia28386 Actinidia chinensis HOM05D003565 ORTHO05D003943 8.2e-13 77.8 155 37.4
PGR004G0277 Punica granatum HOM05D003565 ORTHO05D003943 8.2e-13 77.8 152 37.5
PGR004G2171 Punica granatum HOM05D003565 ORTHO05D003943 8.2e-13 77.8 152 37.5
CiPaw.02G081300 Carya illinoinensis HOM05D003565 ORTHO05D003943 1.1e-12 77.4 128 37.5
PSO832G2395 Papaver somniferum HOM05D003565 ORTHO05D003943 1.4e-12 77.0 147 34.0
CARHR091930 Cardamine hirsuta HOM05D003565 ORTHO05D003943 1.8e-12 76.6 145 37.9
CARHR150160 Cardamine hirsuta HOM05D003565 ORTHO05D003943 1.8e-12 76.6 145 37.9
HanXRQChr13g0420001 Helianthus annuus HOM05D003565 ORTHO05D003943 1.8e-12 76.6 140 37.1
PGR004G2038 Punica granatum HOM05D003565 ORTHO05D003943 1.8e-12 76.6 124 41.1
CANSAT78G1552 Cannabis sativa HOM05D003565 ORTHO05D003943 2.4e-12 76.3 153 34.6
vmacro15222 Vaccinium macrocarpon HOM05D003565 ORTHO05D003943 2.4e-12 76.3 139 35.3
Prupe.1G133700 Prunus persica HOM05D003565 ORTHO05D003943 3.1e-12 75.9 135 34.8
CiPaw.02G058900 Carya illinoinensis HOM05D003565 ORTHO05D003943 4.1e-12 75.5 126 37.3
Lsat_1_v5_gn_6_95321 Lactuca sativa HOM05D003565 ORTHO05D003943 4.1e-12 75.5 150 36.0
Rhsim02G0008000 Rhododendron simsii HOM05D003565 ORTHO05D003943 4.1e-12 75.5 139 33.8
SalBow2G2654 Salvia bowleyana HOM05D003565 ORTHO05D003943 4.1e-12 75.5 154 36.4
SGA_v2.0_scaffold18G08345 Striga asiatica HOM05D003565 ORTHO05D003943 4.1e-12 75.5 139 36.7
Cfa015408 Carpinus fangiana HOM05D003565 ORTHO05D003943 2.0e-11 73.2 144 32.6
Gorai.011G191400 Gossypium raimondii HOM05D003565 ORTHO05D003943 2.6e-11 72.8 125 35.2
MBI18_g24867_MAGBIO Magnolia biondii HOM05D003565 ORTHO05D003943 2.6e-11 72.8 104 41.3
RcHm_v2.0_Chr4g0422991 Rosa chinensis HOM05D003565 ORTHO05D003943 2.6e-11 72.8 156 31.4
GSVIVG01035140001 Vitis vinifera HOM05D003565 ORTHO05D003943 2.6e-11 72.8 151 33.8
ClCG05G006170 Citrullus lanatus HOM05D003565 ORTHO05D003943 4.5e-11 72.0 152 33.6
MELO3C035189.2 Cucumis melo HOM05D003565 ORTHO05D003943 4.5e-11 72.0 152 33.6
Gohir.A10G165200 Gossypium hirsutum HOM05D003565 ORTHO05D003943 4.5e-11 72.0 125 34.4
Prupe.1G133600 Prunus persica HOM05D003565 ORTHO05D003943 4.5e-11 72.0 153 34.6
Nitab4.5_0000513g0180 Nicotiana tabacum HOM05D003565 ORTHO05D003943 5.9e-11 71.6 154 36.4
DCAR_027062 Daucus carota HOM05D003565 ORTHO05D003943 7.7e-11 71.2 154 32.5
DCAR_027064 Daucus carota HOM05D003565 ORTHO05D003943 7.7e-11 71.2 154 32.5
FAN12G0358 Fragaria x ananassa HOM05D003565 ORTHO05D003943 7.7e-11 71.2 152 33.6
ECA240G0767 Erigeron canadensis HOM05D003565 ORTHO05D003943 1.0e-10 70.9 134 37.3
FvH4_4g18480 Fragaria vesca HOM05D003565 ORTHO05D003943 1.0e-10 70.9 151 32.5
FAN12G1574 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.0e-10 70.9 151 32.5
Haze_01182 Corylus avellana HOM05D003565 ORTHO05D003943 1.3e-10 70.5 144 35.4
MELO3C006673.2 Cucumis melo HOM05D003565 ORTHO05D003943 1.3e-10 70.5 159 31.4
CsaV3_3G014750 Cucumis sativus L. HOM05D003565 ORTHO05D003943 1.3e-10 70.5 130 36.9
HanXRQChr01g0002181 Helianthus annuus HOM05D003565 ORTHO05D003943 1.3e-10 70.5 132 35.6
CsaV3_UNG044240 Cucumis sativus L. HOM05D003565 ORTHO05D003943 1.7e-10 70.1 117 37.6
HanXRQChr03g0088801 Helianthus annuus HOM05D003565 ORTHO05D003943 1.7e-10 70.1 129 38.0
THA.LOC104820292 Tarenaya hassleriana HOM05D003565 ORTHO05D003943 1.7e-10 70.1 130 34.6
CsaV3_6G023960 Cucumis sativus L. HOM05D000549 ORTHO05D001527 2.2e-10 69.7 117 36.8
Actinidia14291 Actinidia chinensis HOM05D003565 ORTHO05D003943 2.9e-10 69.3 135 34.8
Ciclev10006885m.g Citrus clementina HOM05D003565 ORTHO05D003943 2.9e-10 69.3 116 35.3
MD00G1127800 Malus domestica HOM05D003565 ORTHO05D003943 2.9e-10 69.3 129 35.7
COL.COLO4_13836 Corchorus olitorius HOM05D003565 ORTHO05D003943 3.8e-10 68.9 157 31.8
Solyc01g066680.3 Solanum lycopersicum HOM05D003565 ORTHO05D003943 3.8e-10 68.9 134 35.1
CsaV3_6G024110 Cucumis sativus L. HOM05D000549 ORTHO05D003943 5.0e-10 68.6 117 35.9
HanXRQChr08g0214541 Helianthus annuus HOM05D003565 ORTHO05D003943 5.0e-10 68.6 128 38.3
Sed0004032 Sechium edule HOM05D003565 ORTHO05D003943 5.0e-10 68.6 135 36.3
Os07g0674500 Oryza sativa ssp. japonica HOM05D003565 ORTHO05D003943 6.5e-10 68.2 144 32.6
Sopen01g028300 Solanum pennellii HOM05D003565 ORTHO05D003943 6.5e-10 68.2 152 32.9
Gohir.D10G171300 Gossypium hirsutum HOM05D003565 ORTHO05D003943 8.5e-10 67.8 125 33.6
Duzib151G1023 Durio zibethinus HOM05D003565 ORTHO05D003943 1.1e-09 67.4 103 37.9
Thecc.04G287000 Theobroma cacao HOM05D003565 ORTHO05D003943 1.1e-09 67.4 156 32.1
Aa31LG8G3780 Aethionema arabicum HOM05D003565 ORTHO05D003943 1.4e-09 67.0 118 33.9
FAN17G2113 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.4e-09 67.0 150 31.3
HanXRQChr03g0088811 Helianthus annuus HOM05D003565 ORTHO05D003943 1.4e-09 67.0 129 35.7
HanXRQChr05g0130321 Helianthus annuus HOM05D003565 ORTHO05D003943 1.4e-09 67.0 130 33.1
Nitab4.5_0000194g0060 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.4e-09 67.0 136 38.2
HPP92_006917 Vanilla planifolia HOM05D003565 ORTHO05D003943 1.9e-09 66.6 147 30.6
CSS0008161 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 2.5e-09 66.2 148 33.1
BcaC09g48620 Brassica carinata HOM05D003565 ORTHO05D003943 4.2e-09 65.5 95 41.1
HanXRQChr03g0089401 Helianthus annuus HOM05D003565 ORTHO05D003943 4.2e-09 65.5 138 37.0
Nitab4.5_0005362g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 5.5e-09 65.1 151 35.8
HanXRQChr08g0214531 Helianthus annuus HOM05D003565 ORTHO05D003943 7.2e-09 64.7 142 36.6
HanXRQChr03g0089391 Helianthus annuus HOM05D003565 ORTHO05D003943 1.2e-08 63.9 118 34.7
Lj6g0014140 Lotus japonicus HOM05D003565 ORTHO05D003943 1.2e-08 63.9 127 33.1
HanXRQChr03g0089351 Helianthus annuus HOM05D003565 ORTHO05D003943 1.6e-08 63.5 149 33.6
ATR0796G036 Amborella trichopoda HOM05D003565 ORTHO05D003943 2.1e-08 63.2 148 30.4
Medtr2g436350 Medicago truncatula HOM05D003565 ORTHO05D003943 2.1e-08 63.2 134 32.1
Sed0026730 Sechium edule HOM05D003565 ORTHO05D003943 2.1e-08 63.2 122 32.0
AL3G29580 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 3.6e-08 62.4 125 36.0
Oeu026321.1 Olea europaea HOM05D003565 ORTHO05D003943 4.6e-08 62.0 121 36.4
Psat1g155160 Pisum sativum HOM05D003565 ORTHO05D003943 4.6e-08 62.0 133 32.3
VMungo1309G1767 Vigna mungo HOM05D003565 ORTHO05D003943 4.6e-08 62.0 123 34.1
CiPaw.02G081400 Carya illinoinensis HOM05D003565 ORTHO05D003943 6.1e-08 61.6 126 32.5
CiPaw.02G081500 Carya illinoinensis HOM05D003565 ORTHO05D003943 6.1e-08 61.6 126 32.5
TPR.G31280 Trifolium pratense HOM05D003565 ORTHO05D003943 6.1e-08 61.6 101 36.6
Carub.0003s1639 Capsella rubella HOM05D003565 ORTHO05D003943 1.0e-07 60.8 121 34.7
Ciclev10006409m.g Citrus clementina HOM05D003565 ORTHO05D003943 1.4e-07 60.5 148 33.1
MSTRG.10106 Avicennia marina HOM05D003565 ORTHO05D003943 2.3e-07 59.7 140 34.3
AT3G16670 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 3.0e-07 59.3 150 28.7
Cc03_g01690 Coffea canephora HOM05D003565 ORTHO05D003943 3.0e-07 59.3 149 37.6
TWI09G1223 Tripterygium wilfordii HOM05D003565 ORTHO05D003943 3.0e-07 59.3 130 34.6
TAR362G0267 Trochodendron aralioides HOM05D003565 ORTHO05D003943 3.9e-07 58.9 155 27.7
A01p37210 Brassica napus HOM05D003565 ORTHO05D003943 5.1e-07 58.5 99 35.4
CARHR091920 Cardamine hirsuta HOM05D003565 ORTHO05D003943 5.1e-07 58.5 157 31.8
AT3G16660 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 6.7e-07 58.2 120 33.3
CARHR150150 Cardamine hirsuta HOM05D003565 ORTHO05D003943 6.7e-07 58.2 157 31.8
FvH4_4g18430 Fragaria vesca HOM05D003565 ORTHO05D003943 6.7e-07 58.2 152 33.6
FAN12G0988 Fragaria x ananassa HOM05D003565 ORTHO05D003943 8.8e-07 57.8 138 32.6
FAN17G0998 Fragaria x ananassa HOM05D003565 ORTHO05D003943 8.8e-07 57.8 161 33.5
FAN12G2280 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.1e-06 57.4 140 32.9
CiPaw.02G059100 Carya illinoinensis HOM05D003565 ORTHO05D003943 1.5e-06 57.0 100 34.0
ECA247G1649 Erigeron canadensis HOM05D023078 ORTHO05D003943 1.5e-06 57.0 137 29.2
Glyma.09G043500 Glycine max HOM05D003565 ORTHO05D003943 1.5e-06 57.0 152 30.3
Nitab4.5_0003949g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.5e-06 57.0 131 35.9
Nitab4.5_0003949g0040 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.5e-06 57.0 131 35.1
AL3G29590 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 2.0e-06 56.6 160 32.5
BcaB04g20866 Brassica carinata HOM05D003565 ORTHO05D003943 2.0e-06 56.6 127 30.7
A01p37230 Brassica napus HOM05D003565 ORTHO05D003943 2.0e-06 56.6 99 34.3
Carub.0002s1293 Capsella rubella HOM05D003565 ORTHO05D003943 2.0e-06 56.6 158 32.9
CARHR091910 Cardamine hirsuta HOM05D003565 ORTHO05D003943 2.0e-06 56.6 124 34.7
Phvul.009G249400 Phaseolus vulgaris HOM05D003565 ORTHO05D003943 2.0e-06 56.6 150 29.3
Nitab4.5_0000194g0050 Nicotiana tabacum HOM05D003565 ORTHO05D003943 5.7e-06 55.1 98 34.7


User provided reference genes

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