Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 3.1e-169 599.0 453 100.0
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 9.6e-54 215.3 461 57.9
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 9.6e-46 188.7 480 46.7
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 4.2e-41 173.3 517 53.2
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 7.9e-40 169.1 472 52.1
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.5e-38 164.9 520 41.7
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 1.5e-38 164.9 495 52.9
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 1.9e-38 164.5 512 39.8
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 2.8e-37 160.6 515 48.2
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 2.8e-37 160.6 494 50.0
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 2.8e-37 160.6 473 51.0
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 9.0e-36 155.6 530 45.8
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 1.5e-35 154.8 530 45.7
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 2.0e-35 154.5 476 48.7
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 2.2e-34 151.0 477 50.9
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 3.8e-34 150.2 478 41.4
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 1.1e-33 148.7 506 48.0
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 1.1e-33 148.7 524 45.6
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 1.9e-33 147.9 464 53.7
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 3.2e-33 147.1 490 46.3
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 1.2e-32 145.2 488 47.7
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 3.0e-31 140.6 501 48.1
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 3.9e-31 140.2 476 46.4
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 6.7e-31 139.4 387 33.6
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 8.7e-31 139.0 471 48.4
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.3e-30 137.1 495 43.6
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 4.3e-30 136.7 321 34.6
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 7.4e-30 136.0 486 39.7
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 7.4e-30 136.0 507 45.8
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 2.8e-29 134.0 478 39.5
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 1.4e-28 131.7 486 46.1
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 2.4e-28 131.0 277 37.2
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 2.4e-28 131.0 486 41.2
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 2.4e-28 131.0 487 46.8
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 6.9e-28 129.4 471 42.7
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 9.0e-28 129.0 513 47.4
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 3.4e-27 127.1 650 38.2
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 4.5e-27 126.7 508 41.3
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 1.7e-26 124.8 471 49.9
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 2.2e-26 124.4 510 39.4
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 5.0e-26 123.2 453 41.5
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 5.0e-26 123.2 508 44.5
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.1e-25 122.1 255 59.6
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 1.1e-25 122.1 498 48.4
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 1.2e-24 118.6 491 47.0
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 2.7e-24 117.5 275 40.4
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 2.7e-24 117.5 491 47.5
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 3.6e-24 117.1 329 35.3
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 6.1e-24 116.3 333 34.2
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 6.1e-24 116.3 313 31.9
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 6.1e-24 116.3 473 42.9
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 6.1e-24 116.3 486 47.1
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 7.9e-24 115.9 491 45.6
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 1.4e-23 115.2 435 46.7
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 2.3e-23 114.4 489 46.6
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 2.3e-23 114.4 455 48.4
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 5.1e-23 113.2 489 42.9
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 8.8e-23 112.5 472 50.8
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 4.3e-22 110.2 460 38.7
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 1.3e-21 108.6 488 48.0
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 3.7e-21 107.1 249 35.3
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 6.3e-21 106.3 445 47.4
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 8.2e-21 105.9 276 35.9
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 1.4e-20 105.1 470 50.2
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 1.4e-20 105.1 497 47.1
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 2.4e-20 104.4 495 39.0
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 3.1e-20 104.0 340 30.9
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 4.1e-20 103.6 520 38.3
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 4.1e-20 103.6 494 45.1
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 6.9e-20 102.8 462 45.9
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 6.9e-20 102.8 306 30.7
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 1.2e-19 102.1 489 39.5
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 1.2e-19 102.1 229 34.1
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 6.5e-18 96.3 283 34.3
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 8.5e-18 95.9 243 35.0
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 1.4e-17 95.1 486 46.3
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 1.4e-17 95.1 491 43.0
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 2.5e-17 94.4 465 42.4
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 5.5e-17 93.2 59 79.7
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 7.2e-17 92.8 259 31.7
Zm00001eb140080 Zea mays HOM05D007535 ORTHO05D008520 1.2e-16 92.0 503 46.3
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 2.1e-16 91.3 489 43.6
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 3.0e-15 87.4 272 32.7
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 6.7e-15 86.3 59 72.9
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 3.3e-14 84.0 291 44.3
MD11G1168900 Malus domestica HOM05D007535 ORTHO05D008520 5.7e-14 83.2 173 51.4
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 4.8e-13 80.1 466 45.7
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 1.8e-12 78.2 221 32.1
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 4.1e-12 77.0 295 35.3
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 7.0e-12 76.3 496 42.7
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 1.2e-11 75.5 287 41.5
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.8e-10 70.5 362 28.2
Aa31LG1G13230 Aethionema arabicum HOM05D012474 ORTHO05D008520 4.2e-09 67.0 248 31.5
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 9.4e-09 65.9 249 28.1
C09p54330 Brassica napus HOM05D012474 ORTHO05D008520 8.0e-08 62.8 58 53.4
BcaC04g19565 Brassica carinata HOM05D012474 ORTHO05D008520 2.3e-07 61.2 58 53.4
CARHR191220 Cardamine hirsuta HOM05D012474 ORTHO05D008520 5.2e-07 60.1 248 29.4
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.1e-06 58.9 319 55.5
Sp6g22920 Schrenkiella parvula HOM05D012474 ORTHO05D008520 3.3e-06 57.4 254 28.3
BcaB08g36440 Brassica carinata HOM05D012474 ORTHO05D008520 7.4e-06 56.2 250 30.0


User provided reference genes

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