Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold177G39426 Striga asiatica HOM05D008413 ORTHO05D000401 3.7e-141 505.0 279 100.0
SGA_v2.0_scaffold61G21156 Striga asiatica HOM05D008413 ORTHO05D000401 1.7e-117 426.4 270 86.3
SGA_v2.0_scaffold119G32741 Striga asiatica HOM05D008413 ORTHO05D000401 1.5e-113 413.3 277 84.8
SGA_v2.0_scaffold368G50078 Striga asiatica HOM05D008413 ORTHO05D000401 1.4e-111 406.8 277 84.1
SGA_v2.0_scaffold90G27840 Striga asiatica HOM05D008413 ORTHO05D000401 4.5e-110 401.7 277 79.8
SGA_v2.0_scaffold218G42484 Striga asiatica HOM05D008413 ORTHO05D000401 1.9e-81 306.6 276 58.0
SGA_v2.0_scaffold323G48638 Striga asiatica HOM05D008413 ORTHO05D000401 4.5e-78 295.4 193 79.8
SGA_v2.0_scaffold169G38717 Striga asiatica HOM05D008413 ORTHO05D000401 1.7e-64 250.4 274 51.8
SGA_v2.0_scaffold12G05983 Striga asiatica HOM05D008413 ORTHO05D000401 6.3e-64 248.4 198 64.1
SGA_v2.0_scaffold85G26643 Striga asiatica HOM05D008413 ORTHO05D000401 7.2e-52 208.4 268 44.4
SGA_v2.0_scaffold208G41998 Striga asiatica HOM05D008413 ORTHO05D000401 3.1e-47 193.0 290 39.3
Atru.chr1.2141 Acer truncatum HOM05D008413 ORTHO05D000401 5.9e-46 188.7 282 48.6
Atru.chr1.1934 Acer truncatum HOM05D008413 ORTHO05D000401 1.3e-45 187.6 288 47.2
SGA_v2.0_scaffold4G02509 Striga asiatica HOM05D008413 ORTHO05D000401 1.7e-45 187.2 227 49.8
SGA_v2.0_scaffold17G08026 Striga asiatica HOM05D008413 ORTHO05D000401 4.2e-44 182.6 284 44.7
SGA_v2.0_scaffold234G43617 Striga asiatica HOM05D008413 ORTHO05D000401 9.5e-44 181.4 269 40.5
SGA_v2.0_scaffold28G12014 Striga asiatica HOM05D008413 ORTHO05D000401 5.2e-42 175.6 315 36.5
SGA_v2.0_scaffold50G18468 Striga asiatica HOM05D008413 ORTHO05D000401 7.0e-39 165.2 215 44.2
PSO478G0274 Papaver somniferum HOM05D008413 ORTHO05D000401 6.6e-37 158.7 275 34.9
PSO541G5389 Papaver somniferum HOM05D008413 ORTHO05D000401 1.1e-36 157.9 275 35.3
SGA_v2.0_scaffold90G27895 Striga asiatica HOM05D008413 ORTHO05D000401 4.4e-33 146.0 132 59.8
PSO591G0033 Papaver somniferum HOM05D008413 ORTHO05D000401 1.1e-31 141.4 288 33.7
PSO063G5428 Papaver somniferum HOM05D008413 ORTHO05D000401 2.3e-29 133.7 274 33.6
SGA_v2.0_scaffold22G09929 Striga asiatica HOM05D008413 ORTHO05D000401 5.0e-29 132.5 259 34.7
PSO017G6541 Papaver somniferum HOM05D008413 ORTHO05D000401 6.6e-29 132.1 186 39.8
PSO063G1996 Papaver somniferum HOM05D008413 ORTHO05D000401 6.6e-29 132.1 274 33.6
PSO675G5967 Papaver somniferum HOM05D008413 ORTHO05D000401 1.5e-28 131.0 246 33.7
SGA_v2.0_scaffold176G39371 Striga asiatica HOM05D008413 ORTHO05D000401 3.6e-27 126.3 202 38.1
PSO384G2190 Papaver somniferum HOM05D008413 ORTHO05D000401 8.0e-27 125.2 276 32.2
PSO782G4524 Papaver somniferum HOM05D008413 ORTHO05D000401 1.8e-26 124.0 190 38.9
SGA_v2.0_scaffold86G26910 Striga asiatica HOM05D008413 ORTHO05D000401 4.0e-26 122.9 74 75.7
PSO541G0947 Papaver somniferum HOM05D008413 ORTHO05D000401 6.8e-26 122.1 172 38.4
SGA_v2.0_scaffold55G19853 Striga asiatica HOM05D008413 ORTHO05D000401 9.2e-23 111.7 160 43.1
SGA_v2.0_scaffold84G26501 Striga asiatica HOM05D008413 ORTHO05D000401 3.5e-22 109.8 193 38.9
SGA_v2.0_scaffold284G47013 Striga asiatica HOM05D008413 ORTHO05D000401 2.5e-20 103.6 288 29.9
SGA_v2.0_scaffold74G24716 Striga asiatica HOM05D008413 ORTHO05D000401 3.3e-20 103.2 267 30.7
SGA_v2.0_scaffold221G42721 Striga asiatica HOM05D008413 ORTHO05D000401 1.2e-19 101.3 247 31.2
PSO339G5332 Papaver somniferum HOM05D008413 ORTHO05D000401 3.4e-17 93.2 256 29.7
Atru.chr11.187 Acer truncatum HOM05D008413 ORTHO05D000401 1.3e-16 91.3 72 58.3
SGA_v2.0_scaffold18G08316 Striga asiatica HOM05D008413 ORTHO05D000401 2.9e-16 90.1 171 49.7
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.9e-15 87.4 268 26.1
SGA_v2.0_scaffold323G48637 Striga asiatica HOM05D008413 ORTHO05D000401 4.1e-15 86.3 56 71.4
SGA_v2.0_scaffold38G15030 Striga asiatica HOM05D008413 ORTHO05D000401 3.5e-14 83.2 257 30.7
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 3.9e-13 79.7 260 27.7
Ciclev10018206m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.1e-12 78.2 161 32.3
SGA_v2.0_scaffold19G08596 Striga asiatica HOM05D008413 ORTHO05D000401 3.3e-12 76.6 100 46.0
SGA_v2.0_scaffold11G05878 Striga asiatica HOM05D001576 ORTHO05D000401 4.3e-12 76.3 259 27.4
SGA_v2.0_scaffold239G43990 Striga asiatica HOM05D001576 ORTHO05D000401 4.3e-12 76.3 259 27.4
Zm00001eb138070 Zea mays HOM05D001576 ORTHO05D000401 7.3e-12 75.5 245 25.3
PSO170G1591 Papaver somniferum HOM05D008413 ORTHO05D000401 1.2e-11 74.7 75 48.0
Ciclev10017471m.g Citrus clementina HOM05D001576 ORTHO05D000401 3.6e-11 73.2 162 32.7
ECA246G1137 Erigeron canadensis HOM05D000464 ORTHO05D000408 3.6e-11 73.2 93 34.4
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-10 71.6 201 30.3
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-10 71.6 201 30.3
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.1e-10 71.6 288 25.7
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.4e-10 71.2 136 29.4
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.4e-10 71.2 136 29.4
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.4e-10 70.5 201 30.3
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.4e-10 70.5 201 30.3
CSS0004495 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.4e-10 70.5 190 29.5
CSS0004943 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.4e-10 70.5 99 34.3
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.4e-10 70.5 201 30.3
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.4e-10 70.5 201 30.3
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.4e-10 70.5 201 30.3
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.4e-10 70.5 257 24.9
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.1e-10 70.1 201 30.3
CSS0042927 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.1e-10 70.1 199 31.2
Aqoxy1G02949 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 5.2e-10 69.3 133 26.3
AL5G28650 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 5.2e-10 69.3 129 30.2
CSS0031528 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.2e-10 69.3 99 33.3
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 5.2e-10 69.3 257 24.9
SGA_v2.0_scaffold241G44187 Striga asiatica HOM05D008413 ORTHO05D000401 6.8e-10 68.9 161 36.6
CSS0014176 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D010219 8.9e-10 68.6 99 33.3
ECA247G3187 Erigeron canadensis HOM05D008106 ORTHO05D010314 8.9e-10 68.6 97 32.0
Aqoxy3G02110 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 1.2e-09 68.2 133 26.3
Hma1.2p1_1313F.1_g274940 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 2.0e-09 67.4 165 29.1
Aqoxy6G02363 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 3.4e-09 66.6 133 25.6
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.4e-09 66.6 159 29.6
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.4e-09 66.6 159 29.6
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.4e-09 66.6 159 29.6
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.4e-09 66.6 159 29.6
CSS0047725 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.4e-09 66.6 98 34.7
CSS0006547 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.6e-09 65.5 99 33.3
Haze_12994 Corylus avellana HOM05D001576 ORTHO05D000401 7.6e-09 65.5 99 35.4
CSS0035632 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.9e-09 65.1 93 33.3
Os07g0554400 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 9.9e-09 65.1 102 34.3
HanXRQChr08g0232381 Helianthus annuus HOM05D001576 ORTHO05D000401 1.3e-08 64.7 104 32.7
SGA_v2.0_scaffold231G43417 Striga asiatica HOM05D008413 ORTHO05D000401 1.7e-08 64.3 69 44.9
HanXRQChr17g0568671 Helianthus annuus HOM05D032522 ORTHO05D008061 8.4e-08 62.0 100 28.0
RhsimUnG0137500 Rhododendron simsii HOM05D001576 ORTHO05D000401 8.4e-08 62.0 173 27.2
PSO832G0249 Papaver somniferum HOM05D008413 ORTHO05D000401 1.1e-07 61.6 69 44.9
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.1e-07 61.6 282 25.5
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 1.4e-07 61.2 259 24.3
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 1.4e-07 61.2 259 24.3
CiPaw.01G033500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.4e-07 60.5 154 27.3
Os05g0227800 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 2.4e-07 60.5 122 29.5
ECA233G2970 Erigeron canadensis HOM05D006295 ORTHO05D008061 4.1e-07 59.7 108 29.6
CiPaw.10G028800 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.4e-07 59.3 154 27.3
CiPaw.10G139700 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.4e-07 59.3 160 30.0
PSO017G1655 Papaver somniferum HOM05D008413 ORTHO05D000401 7.1e-07 58.9 70 40.0
Rhsim03G0135600 Rhododendron simsii HOM05D001576 ORTHO05D010219 7.1e-07 58.9 267 26.6
CiPaw.07G178300 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.2e-07 58.5 154 27.3
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 9.2e-07 58.5 232 25.9
CiPaw.05G236500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-06 58.2 154 27.3
CiPaw.09G014300 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-06 58.2 154 27.3
CiPaw.14G134600 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-06 58.2 154 27.3
FvH4_3g31921 Fragaria vesca HOM05D001576 ORTHO05D000401 1.6e-06 57.8 252 25.0
Hma1.2p1_1287F.1_g273260 Hydrangea macrophylla HOM05D009738 ORTHO05D011821 1.6e-06 57.8 100 35.0
Rhsim08G0115200 Rhododendron simsii HOM05D007743 ORTHO05D004645 2.1e-06 57.4 258 22.9
Dinv41014 Davidia involucrata HOM05D001668 ORTHO05D001693 2.7e-06 57.0 92 34.8
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.7e-06 57.0 295 23.4
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.7e-06 57.0 295 23.4
Aqoxy5G02988 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 3.5e-06 56.6 276 24.3
Rhsim13G0212700 Rhododendron simsii HOM05D002367 ORTHO05D011821 3.5e-06 56.6 156 29.5
CiPaw.07G099700 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.0e-06 55.8 198 30.8
CiPaw.07G147000 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.0e-06 55.8 154 27.3
TWI23G0314 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 7.8e-06 55.5 154 26.0


User provided reference genes

Program Settings