Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold177G39425 Striga asiatica HOM05D006357 ORTHO05D007925 6.5e-97 357.5 187 100.0
Migut.N02483 Erythranthe guttata HOM05D006357 ORTHO05D007925 6.7e-78 294.3 187 77.5
SalBow3G2384 Salvia bowleyana HOM05D006357 ORTHO05D007925 1.5e-77 293.1 186 74.7
MSTRG.12374 Avicennia marina HOM05D006357 ORTHO05D007925 1.7e-76 289.7 187 75.9
unitig_699.g19178 Utricularia gibba HOM05D006357 ORTHO05D007925 9.4e-72 273.9 185 73.5
Glyma.11G182400 Glycine max HOM05D006357 ORTHO05D007925 6.7e-70 267.7 183 71.0
VMungo1127G1055 Vigna mungo HOM05D006357 ORTHO05D007925 1.1e-69 266.9 183 73.2
Phvul.011G095000 Phaseolus vulgaris HOM05D006357 ORTHO05D007925 2.0e-69 266.2 183 72.7
Solyc11g068550.1 Solanum lycopersicum HOM05D006357 ORTHO05D007925 5.7e-69 264.6 179 70.4
Sopen11g027270 Solanum pennellii HOM05D006357 ORTHO05D007925 5.7e-69 264.6 179 70.4
arahy.Tifrunner.gnm1.ann1.5186VC Arachis hypogaea HOM05D006357 ORTHO05D007925 1.8e-67 259.6 178 71.9
Dinv22833 Davidia involucrata HOM05D006357 ORTHO05D007925 2.4e-67 259.2 178 67.4
Nitab4.5_0005641g0010 Nicotiana tabacum HOM05D006357 ORTHO05D007925 2.4e-67 259.2 176 69.9
Nitab4.5_0006120g0030 Nicotiana tabacum HOM05D006357 ORTHO05D007925 2.4e-67 259.2 176 69.3
ClCG02G022220 Citrullus lanatus HOM05D006357 ORTHO05D007925 5.3e-67 258.1 184 68.5
PGR119G0351 Punica granatum HOM05D006357 ORTHO05D007925 5.3e-67 258.1 179 70.9
arahy.Tifrunner.gnm1.ann1.JXBE2X Arachis hypogaea HOM05D006357 ORTHO05D007925 7.0e-67 257.7 178 71.3
Prupe.6G132700 Prunus persica HOM05D006357 ORTHO05D007925 7.0e-67 257.7 184 66.8
Gohir.D08G016000 Gossypium hirsutum HOM05D006357 ORTHO05D007925 1.2e-66 256.9 187 67.4
Gorai.004G010300 Gossypium raimondii HOM05D006357 ORTHO05D007925 1.2e-66 256.9 187 67.4
THA.LOC104814785 Tarenaya hassleriana HOM05D006357 ORTHO05D007925 1.2e-66 256.9 187 67.9
MELO3C014499.2 Cucumis melo HOM05D006357 ORTHO05D007925 2.0e-66 256.1 184 67.9
CiPaw.13G134700 Carya illinoinensis HOM05D006357 ORTHO05D007925 2.6e-66 255.8 183 68.3
Gohir.A08G005700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 2.6e-66 255.8 184 67.9
Thecc.09G281200 Theobroma cacao HOM05D006357 ORTHO05D007925 3.5e-66 255.4 184 65.8
CsaV3_6G038350 Cucumis sativus L. HOM05D006357 ORTHO05D007925 5.9e-66 254.6 184 67.4
Atru.chr3.3206 Acer truncatum HOM05D006357 ORTHO05D007925 7.7e-66 254.2 184 67.4
Atru.chr3.3208 Acer truncatum HOM05D006357 ORTHO05D007925 7.7e-66 254.2 184 66.8
Cfa010003 Carpinus fangiana HOM05D006357 ORTHO05D007925 2.9e-65 252.3 184 65.8
Duzib150G0376 Durio zibethinus HOM05D006357 ORTHO05D007925 2.9e-65 252.3 183 67.2
CSS0003287 Camellia sinensis var. sinensis HOM05D006357 ORTHO05D007925 3.8e-65 251.9 175 68.0
Cc01_g08980 Coffea canephora HOM05D006357 ORTHO05D007925 3.8e-65 251.9 180 67.8
MD03G1147800 Malus domestica HOM05D006357 ORTHO05D007925 3.8e-65 251.9 184 66.3
Rhsim01G0204700 Rhododendron simsii HOM05D006357 ORTHO05D007925 3.8e-65 251.9 175 67.4
RcHm_v2.0_Chr5g0046241 Rosa chinensis HOM05D006357 ORTHO05D007925 3.8e-65 251.9 184 63.6
Lsat_1_v5_gn_1_59200 Lactuca sativa HOM05D006357 ORTHO05D007925 1.5e-64 250.0 175 66.9
FvH4_3g25140 Fragaria vesca HOM05D006357 ORTHO05D007925 1.9e-64 249.6 184 63.6
FAN21G3578 Fragaria x ananassa HOM05D006357 ORTHO05D007925 1.9e-64 249.6 184 64.1
Lalb_Chr01g0004891 Lupinus albus HOM05D006357 ORTHO05D007925 1.9e-64 249.6 184 63.0
Lj2P966T16 Lonicera japonica HOM05D006357 ORTHO05D007925 2.5e-64 249.2 184 64.7
Ca_19414_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 3.2e-64 248.8 183 65.0
Lj3g0017887 Lotus japonicus HOM05D006357 ORTHO05D007925 3.2e-64 248.8 183 65.0
Medtr4g052840 Medicago truncatula HOM05D006357 ORTHO05D007925 4.2e-64 248.4 181 65.2
GSVIVG01036107001 Vitis vinifera HOM05D006357 ORTHO05D007925 4.2e-64 248.4 185 67.0
Actinidia37077 Actinidia chinensis HOM05D006357 ORTHO05D007925 5.5e-64 248.1 186 66.7
Ciclev10029363m.g Citrus clementina HOM05D006357 ORTHO05D007925 7.2e-64 247.7 184 64.7
Eucgr.J00502 Eucalyptus grandis HOM05D006357 ORTHO05D007925 9.4e-64 247.3 182 66.5
HanXRQChr01g0024501 Helianthus annuus HOM05D006357 ORTHO05D007925 1.2e-63 246.9 175 67.4
Sp5g16810 Schrenkiella parvula HOM05D006357 ORTHO05D007925 2.1e-63 246.1 181 65.2
Psat7g187640 Pisum sativum HOM05D006357 ORTHO05D007925 2.7e-63 245.7 181 66.3
TPR.G17225 Trifolium pratense HOM05D006357 ORTHO05D007925 2.7e-63 245.7 177 67.2
A06p22010 Brassica napus HOM05D006357 ORTHO05D007925 6.1e-63 244.6 181 63.5
BraA06t25289Z Brassica rapa HOM05D006357 ORTHO05D007925 6.1e-63 244.6 181 63.5
Gorai.001G122700 Gossypium raimondii HOM05D006357 ORTHO05D007925 6.1e-63 244.6 178 65.2
Ca_26666_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 8.0e-63 244.2 183 63.9
Gohir.D07G114400 Gossypium hirsutum HOM05D006357 ORTHO05D007925 8.0e-63 244.2 178 65.2
Hma1.2p1_0587F.1_g184180 Hydrangea macrophylla HOM05D006357 ORTHO05D007925 1.0e-62 243.8 187 63.1
Manes.11G162800 Manihot esculenta HOM05D006357 ORTHO05D007925 1.0e-62 243.8 184 63.6
QL01p012073 Quercus lobata HOM05D006357 ORTHO05D007925 1.4e-62 243.4 184 65.2
TWI75G1708 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 1.4e-62 243.4 178 67.4
BcaB01g01165 Brassica carinata HOM05D006357 ORTHO05D007925 1.8e-62 243.0 181 63.5
CARHR104480 Cardamine hirsuta HOM05D006357 ORTHO05D007925 1.8e-62 243.0 181 63.5
CANSAT54G2809 Cannabis sativa HOM05D006357 ORTHO05D007925 2.3e-62 242.7 183 63.4
Prupe.6G132600 Prunus persica HOM05D006357 ORTHO05D007925 2.3e-62 242.7 175 66.3
Carub.0005s1011 Capsella rubella HOM05D006357 ORTHO05D007925 5.2e-62 241.5 183 63.9
TAR633G1946 Trochodendron aralioides HOM05D006357 ORTHO05D007925 5.2e-62 241.5 184 64.1
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 6.7e-62 241.1 180 65.0
QL01p012091 Quercus lobata HOM05D006357 ORTHO05D007925 6.7e-62 241.1 184 64.7
MBI01_g14623_MAGBIO Magnolia biondii HOM05D006357 ORTHO05D007925 8.8e-62 240.7 183 63.4
Aqoxy2G01095 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 1.1e-61 240.4 178 65.2
Gohir.A07G110700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 1.1e-61 240.4 178 64.0
AT3G44380 Arabidopsis thaliana HOM05D006357 ORTHO05D007925 1.5e-61 240.0 183 63.4
Thhalv10010749m.g Eutrema salsugineum HOM05D006357 ORTHO05D007925 1.5e-61 240.0 175 65.7
BcaC01g02047 Brassica carinata HOM05D006357 ORTHO05D007925 2.0e-61 239.6 181 62.4
C03p69190 Brassica napus HOM05D006357 ORTHO05D007925 2.0e-61 239.6 181 62.4
BolC3t19173H Brassica oleracea HOM05D006357 ORTHO05D007925 2.0e-61 239.6 181 62.4
Ah.08g215640 Amaranthus hybridus HOM05D006357 ORTHO05D007925 4.4e-61 238.4 180 63.9
MD11G1166600 Malus domestica HOM05D006357 ORTHO05D007925 4.4e-61 238.4 178 64.6
TWI79G0514 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 9.7e-61 237.3 178 64.0
AL5G22540 Arabidopsis lyrata HOM05D006357 ORTHO05D007925 2.8e-60 235.7 183 62.8
EL10Ac7g15835 Beta vulgaris HOM05D006357 ORTHO05D007925 2.8e-60 235.7 180 61.7
Haze_23361 Corylus avellana HOM05D006357 ORTHO05D007925 6.3e-60 234.6 164 68.9
Nn6g34850 Nelumbo nucifera HOM05D006357 ORTHO05D007925 1.8e-59 233.0 175 62.3
Potri.001G218400 Populus trichocarpa HOM05D006357 ORTHO05D007925 3.1e-59 232.3 185 60.0
Sed0020794 Sechium edule HOM05D006357 ORTHO05D007925 3.1e-59 232.3 181 63.5
Sabra16G0125700 Salix brachista HOM05D006357 ORTHO05D007925 4.1e-59 231.9 185 61.1
PGR102G0344 Punica granatum HOM05D006357 ORTHO05D007925 2.6e-58 229.2 182 62.6
PSO339G3266 Papaver somniferum HOM05D006357 ORTHO05D007925 4.5e-58 228.4 179 59.8
PSO801G0234 Papaver somniferum HOM05D006357 ORTHO05D007925 7.7e-58 227.6 179 59.2
Sc06g0008780 Simmondsia chinensis HOM05D006357 ORTHO05D007925 1.3e-57 226.9 178 55.6
FvH4_3g25160 Fragaria vesca HOM05D006357 ORTHO05D007925 3.8e-57 225.3 184 56.5
FAN25G2095 Fragaria x ananassa HOM05D006357 ORTHO05D007925 5.0e-57 224.9 184 56.5
FAN11G2870 Fragaria x ananassa HOM05D006357 ORTHO05D007925 2.1e-55 219.5 179 57.0
Lalb_Chr03g0028161 Lupinus albus HOM05D006357 ORTHO05D007925 2.7e-55 219.2 184 58.7
Dinv42541 Davidia involucrata HOM05D006357 ORTHO05D007925 8.0e-55 217.6 170 62.4
Aqoxy4G02740 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 3.7e-52 208.8 184 56.0
DCAR_006168 Daucus carota HOM05D006357 ORTHO05D007925 5.4e-51 204.9 177 54.8
Sc21g0007020 Simmondsia chinensis HOM05D006357 ORTHO05D007925 1.2e-50 203.8 193 54.4
Nn6g34849 Nelumbo nucifera HOM05D006357 ORTHO05D007925 1.3e-49 200.3 183 53.6
PSO339G1489 Papaver somniferum HOM05D006357 ORTHO05D007925 7.2e-48 194.5 155 63.2
Ah.15g095880 Amaranthus hybridus HOM05D006357 ORTHO05D007925 9.4e-48 194.1 197 51.8
PSO384G0917 Papaver somniferum HOM05D006357 ORTHO05D007925 2.7e-47 192.6 155 61.9
ECA248G3754 Erigeron canadensis HOM05D006357 ORTHO05D007925 4.0e-46 188.7 133 65.4
AUR62009745 Chenopodium quinoa HOM05D006357 ORTHO05D007925 8.8e-46 187.6 204 47.1
AUR62036201 Chenopodium quinoa HOM05D006357 ORTHO05D007925 3.4e-45 185.7 143 63.6
AUR62036192 Chenopodium quinoa HOM05D006357 ORTHO05D007925 1.7e-44 183.3 205 47.3
Os08g0558300 Oryza sativa ssp. japonica HOM05D006357 ORTHO05D007925 8.3e-44 181.0 174 51.7
PGSC0003DMG400026335 Solanum tuberosum HOM05D006357 ORTHO05D007925 2.9e-41 172.6 108 75.0
Mapoly0079s0020 Marchantia polymorpha HOM05D006357 ORTHO05D007925 2.6e-37 159.5 179 45.3
RcHm_v2.0_Chr5g0046191 Rosa chinensis HOM05D006357 ORTHO05D007925 2.6e-37 159.5 119 63.9
AagrBONN_evm.TU.Sc2ySwM_117.3687 Anthoceros agrestis HOM05D006357 ORTHO05D007925 1.3e-36 157.1 157 47.8
SMO347G0335 Selaginella moellendorffii HOM05D006357 ORTHO05D007925 8.3e-36 154.5 153 49.7
Pp3c2_16750 Physcomitrium patens HOM05D006357 ORTHO05D007925 1.8e-35 153.3 188 44.1
SEGI_40876 Sequoiadendron giganteum HOM05D006357 ORTHO05D007925 4.1e-35 152.1 161 46.6
ATR0820G064 Amborella trichopoda HOM05D006357 ORTHO05D007925 6.6e-33 144.8 185 43.8
Pp3c21_10640 Physcomitrium patens HOM05D006357 ORTHO05D007925 1.1e-32 144.1 161 42.9
Cpa.g.sc195.8 Carica papaya HOM05D006357 ORTHO05D007925 1.2e-31 140.6 108 63.9
Actinidia35469 Actinidia chinensis HOM05D006357 ORTHO05D007925 6.8e-30 134.8 93 68.8
AUR62036200 Chenopodium quinoa HOM05D006357 ORTHO05D007925 1.7e-25 120.2 96 59.4
ATR0820G202 Amborella trichopoda HOM05D006357 ORTHO05D007925 3.9e-25 119.0 132 47.7
Pp3c9_9450 Physcomitrium patens HOM05D006357 ORTHO05D007925 1.9e-24 116.7 160 39.4
AUR62044742 Chenopodium quinoa HOM05D006357 ORTHO05D007925 1.7e-20 103.6 72 68.1
ATR0820G128 Amborella trichopoda HOM05D006357 ORTHO05D007925 3.0e-17 92.8 84 54.8
Glyma.12G090400 Glycine max HOM05D006357 ORTHO05D007925 5.1e-09 65.5 46 67.4
Os12g0119800 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D000273 1.4e-06 57.4 162 28.4


User provided reference genes

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