Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold176G39378 Striga asiatica HOM05D004541 ORTHO05D006163 1.7e-128 462.6 227 100.0
SGA_v2.0_scaffold17G08177 Striga asiatica HOM05D004541 ORTHO05D006163 2.7e-89 332.4 168 94.0
Migut.J01157 Erythranthe guttata HOM05D004541 ORTHO05D006163 1.5e-84 316.6 220 73.6
Actinidia07413 Actinidia chinensis HOM05D004541 ORTHO05D006163 1.2e-73 280.4 214 66.4
unitig_8.g3279 Utricularia gibba HOM05D004541 ORTHO05D006163 1.2e-73 280.4 217 62.7
CANSAT56G4378 Cannabis sativa HOM05D004541 ORTHO05D006163 8.7e-72 274.2 215 62.8
CANSAT56G2738 Cannabis sativa HOM05D004541 ORTHO05D006163 3.3e-71 272.3 215 62.3
Eucgr.C03820 Eucalyptus grandis HOM05D004541 ORTHO05D006163 1.3e-70 270.4 214 63.6
GSVIVG01015382001 Vitis vinifera HOM05D004541 ORTHO05D006163 1.3e-70 270.4 214 64.0
FAN23G1653 Fragaria x ananassa HOM05D004541 ORTHO05D006163 2.1e-70 269.6 221 61.1
Dinv41612 Davidia involucrata HOM05D004541 ORTHO05D006163 6.2e-70 268.1 203 68.5
Ciclev10007326m.g Citrus clementina HOM05D004541 ORTHO05D006163 8.2e-70 267.7 216 63.9
FvH4_1g04670 Fragaria vesca HOM05D004541 ORTHO05D006163 8.2e-70 267.7 221 59.7
Lj7A652G69 Lonicera japonica HOM05D004541 ORTHO05D006163 1.4e-69 266.9 211 64.5
Manes.16G115100 Manihot esculenta HOM05D004541 ORTHO05D006163 1.4e-69 266.9 214 63.6
Thecc.09G109100 Theobroma cacao HOM05D004541 ORTHO05D006163 1.8e-69 266.5 211 63.5
vmacro06222 Vaccinium macrocarpon HOM05D004541 ORTHO05D006163 6.9e-69 264.6 214 63.6
CSS0034093 Camellia sinensis var. sinensis HOM05D004541 ORTHO05D006163 1.5e-68 263.5 212 63.7
VMungo0464G1118 Vigna mungo HOM05D004541 ORTHO05D006163 2.0e-68 263.1 214 60.3
Cc06_g09760 Coffea canephora HOM05D004541 ORTHO05D006163 1.7e-67 260.0 220 60.5
ECA234G1988 Erigeron canadensis HOM05D004541 ORTHO05D006163 2.2e-67 259.6 216 59.7
CiPaw.03G231000 Carya illinoinensis HOM05D004541 ORTHO05D006163 2.9e-67 259.2 210 61.4
HanXRQChr10g0318611 Helianthus annuus HOM05D004541 ORTHO05D006163 2.9e-67 259.2 209 59.8
Ca_20226_v3 Cicer arietinum L. HOM05D004541 ORTHO05D006163 5.0e-67 258.5 217 60.4
Lalb_Chr09g0331191 Lupinus albus HOM05D004541 ORTHO05D006163 5.0e-67 258.5 216 59.3
Duzib187G1831 Durio zibethinus HOM05D004541 ORTHO05D006163 6.5e-67 258.1 212 61.3
Peaxi162Scf00005g04811 Petunia axillaris HOM05D004541 ORTHO05D006163 8.4e-67 257.7 199 64.8
Nitab4.5_0007565g0030 Nicotiana tabacum HOM05D004541 ORTHO05D006163 2.5e-66 256.1 215 61.4
TAR383G1084 Trochodendron aralioides HOM05D004541 ORTHO05D006163 3.2e-66 255.8 209 61.7
Glyma.09G191400 Glycine max HOM05D004541 ORTHO05D006163 5.5e-66 255.0 212 61.3
Medtr6g087520 Medicago truncatula HOM05D004541 ORTHO05D006163 5.5e-66 255.0 214 60.3
Phvul.004G164500 Phaseolus vulgaris HOM05D004541 ORTHO05D006163 7.1e-66 254.6 215 60.0
Psat1g043400 Pisum sativum HOM05D004541 ORTHO05D006163 7.1e-66 254.6 213 60.1
Duzib168G0462 Durio zibethinus HOM05D004541 ORTHO05D006163 9.3e-66 254.2 212 61.8
COL.COLO4_34849 Corchorus olitorius HOM05D004541 ORTHO05D006163 1.6e-65 253.4 203 62.1
RcHm_v2.0_Chr2g0090281 Rosa chinensis HOM05D004541 ORTHO05D006163 2.1e-65 253.1 221 58.4
Prupe.7G232300 Prunus persica HOM05D004541 ORTHO05D006163 2.7e-65 252.7 207 59.4
Atru.chr7.1362 Acer truncatum HOM05D004541 ORTHO05D006163 3.5e-65 252.3 218 63.8
Aqoxy7G01635 Aquilegia oxysepala HOM05D004541 ORTHO05D006163 3.5e-65 252.3 220 57.7
Gohir.A05G023600 Gossypium hirsutum HOM05D004541 ORTHO05D006163 3.5e-65 252.3 211 57.3
Oeu018244.1 Olea europaea HOM05D004541 ORTHO05D006163 4.6e-65 251.9 211 62.6
CAN.G608.21 Capsicum annuum HOM05D004541 ORTHO05D006163 1.8e-64 250.0 194 62.9
Cpa.g.sc23.98 Carica papaya HOM05D004541 ORTHO05D006163 3.9e-64 248.8 195 63.1
QL02p040000 Quercus lobata HOM05D004541 ORTHO05D006163 3.9e-64 248.8 203 62.1
Potri.018G081400 Populus trichocarpa HOM05D004541 ORTHO05D006163 5.1e-64 248.4 202 62.4
Glyma.07G085500 Glycine max HOM05D004541 ORTHO05D006163 6.7e-64 248.1 216 59.7
CSS0021602 Camellia sinensis var. sinensis HOM05D004541 ORTHO05D006163 1.9e-63 246.5 202 62.4
BraA03t10274Z Brassica rapa HOM05D004541 ORTHO05D006163 2.5e-63 246.1 213 57.3
CSS0043571 Camellia sinensis var. sinensis HOM05D004541 ORTHO05D006163 3.3e-63 245.7 214 60.7
Sed0019002 Sechium edule HOM05D004541 ORTHO05D006163 4.3e-63 245.4 214 57.9
TPR.G10041 Trifolium pratense HOM05D004541 ORTHO05D006163 4.3e-63 245.4 203 61.1
BolC3t13584H Brassica oleracea HOM05D004541 ORTHO05D006163 5.7e-63 245.0 213 56.3
ClCG06G008600 Citrullus lanatus HOM05D004541 ORTHO05D006163 5.7e-63 245.0 219 57.1
Solyc09g007300.3 Solanum lycopersicum HOM05D004541 ORTHO05D006163 5.7e-63 245.0 212 60.4
Sopen00g009260 Solanum pennellii HOM05D004541 ORTHO05D006163 5.7e-63 245.0 212 60.4
A03p09570 Brassica napus HOM05D004541 ORTHO05D006163 7.4e-63 244.6 213 56.3
C03p11140 Brassica napus HOM05D004541 ORTHO05D006163 7.4e-63 244.6 213 56.3
Gohir.D05G025033 Gossypium hirsutum HOM05D004541 ORTHO05D006163 1.3e-62 243.8 203 57.6
Gohir.D05G025100 Gossypium hirsutum HOM05D004541 ORTHO05D006163 1.3e-62 243.8 203 57.6
Gorai.009G025200 Gossypium raimondii HOM05D004541 ORTHO05D006163 1.3e-62 243.8 203 57.6
MD15G1183900 Malus domestica HOM05D004541 ORTHO05D006163 1.3e-62 243.8 203 60.1
Lsat_1_v5_gn_5_103081 Lactuca sativa HOM05D004541 ORTHO05D006163 2.2e-62 243.0 201 58.2
Gorai.004G280300 Gossypium raimondii HOM05D004541 ORTHO05D006163 2.8e-62 242.7 209 58.4
PGR102G1372 Punica granatum HOM05D004541 ORTHO05D006163 2.8e-62 242.7 212 59.4
Rhsim03G0241000 Rhododendron simsii HOM05D004541 ORTHO05D006163 3.7e-62 242.3 188 64.4
Gohir.A08G241500 Gossypium hirsutum HOM05D004541 ORTHO05D006163 4.8e-62 241.9 209 58.4
Sp6g24730 Schrenkiella parvula HOM05D004541 ORTHO05D006163 2.4e-61 239.6 215 56.3
FAN19G1993 Fragaria x ananassa HOM05D004541 ORTHO05D006163 3.1e-61 239.2 194 59.3
Lj2g0016785 Lotus japonicus HOM05D004541 ORTHO05D006163 5.3e-61 238.4 204 58.8
PSO210G2419 Papaver somniferum HOM05D004541 ORTHO05D006163 5.3e-61 238.4 219 55.7
Haze_25754 Corylus avellana HOM05D004541 ORTHO05D006163 6.9e-61 238.0 210 57.6
CsaV3_1G024300 Cucumis sativus L. HOM05D004541 ORTHO05D006163 6.9e-61 238.0 216 56.5
BcaB01g04837 Brassica carinata HOM05D004541 ORTHO05D006163 1.2e-60 237.3 215 54.4
Sabra18G0068500 Salix brachista HOM05D004541 ORTHO05D006163 2.0e-60 236.5 189 62.4
TWI34G1287 Tripterygium wilfordii HOM05D004541 ORTHO05D006163 2.6e-60 236.1 212 56.1
PSO210G5975 Papaver somniferum HOM05D004541 ORTHO05D006163 7.7e-60 234.6 219 54.3
CARHR193250 Cardamine hirsuta HOM05D004541 ORTHO05D006163 1.0e-59 234.2 216 53.7
Aa31LG3G3200 Aethionema arabicum HOM05D004541 ORTHO05D006163 1.3e-59 233.8 202 56.4
MELO3C025349.2 Cucumis melo HOM05D004541 ORTHO05D006163 3.8e-59 232.3 218 56.0
Thhalv10012541m.g Eutrema salsugineum HOM05D004541 ORTHO05D006163 3.8e-59 232.3 199 56.3
Hund26211 Selenicereus undatus HOM05D004541 ORTHO05D006163 5.0e-59 231.9 203 57.6
Carub.0006s1801 Capsella rubella HOM05D004541 ORTHO05D006163 6.5e-59 231.5 213 54.0
MBI01_g28040_MAGBIO Magnolia biondii HOM05D004541 ORTHO05D006163 8.5e-59 231.1 200 60.0
Gohir.D08G262300 Gossypium hirsutum HOM05D004541 ORTHO05D006163 1.9e-58 229.9 204 57.4
Nn8g39153 Nelumbo nucifera HOM05D004541 ORTHO05D006163 1.6e-57 226.9 214 54.7
THA.LOC104804980 Tarenaya hassleriana HOM05D004541 ORTHO05D006163 3.6e-57 225.7 202 57.4
AT5G19660 Arabidopsis thaliana HOM05D004541 ORTHO05D006163 4.6e-57 225.3 213 53.5
AUR62010981 Chenopodium quinoa HOM05D004541 ORTHO05D006163 7.9e-57 224.6 187 61.0
EL10Ac8g18481 Beta vulgaris HOM05D004541 ORTHO05D006163 5.1e-56 221.9 185 60.0
Nitab4.5_0000754g0130 Nicotiana tabacum HOM05D004541 ORTHO05D006163 5.1e-56 221.9 184 59.8
AL6G31170 Arabidopsis lyrata HOM05D004541 ORTHO05D006163 1.1e-55 220.7 213 53.5
Nitab4.5_0001142g0040 Nicotiana tabacum HOM05D004541 ORTHO05D006163 2.0e-55 219.9 168 64.9
DCAR_024689 Daucus carota HOM05D004541 ORTHO05D006163 2.5e-55 219.5 188 58.0
CAN.G933.11 Capsicum annuum HOM05D004541 ORTHO05D006163 5.7e-55 218.4 215 54.0
Ah.14g082120 Amaranthus hybridus HOM05D004541 ORTHO05D006163 2.4e-53 213.0 213 52.1
Medtr6g086780 Medicago truncatula HOM05D004541 ORTHO05D006163 1.2e-52 210.7 188 56.9
SHI02736 Sapria himalayana HOM05D004541 ORTHO05D006163 1.3e-51 207.2 213 50.7
Sc18g0001290 Simmondsia chinensis HOM05D004541 ORTHO05D006163 1.4e-50 203.8 169 58.6
MD02G1045500 Malus domestica HOM05D004541 ORTHO05D006163 5.1e-48 195.3 134 66.4
VMungo0464G1847 Vigna mungo HOM05D004541 ORTHO05D006163 1.1e-47 194.1 212 50.5
Os06g0163500 Oryza sativa ssp. japonica HOM05D004541 ORTHO05D006163 2.0e-47 193.4 226 46.0
AUR62021490 Chenopodium quinoa HOM05D004541 ORTHO05D006163 7.4e-47 191.4 214 49.5
FAN26G2455 Fragaria x ananassa HOM05D004541 ORTHO05D006163 1.7e-46 190.3 159 57.2
Lsat_1_v5_gn_8_105101 Lactuca sativa HOM05D004541 ORTHO05D006163 2.2e-46 189.9 177 50.8
Zm00001eb375700 Zea mays HOM05D004541 ORTHO05D006163 6.3e-46 188.3 218 46.8
Nitab4.5_0006929g0020 Nicotiana tabacum HOM05D004541 ORTHO05D006163 1.2e-44 184.1 127 67.7
HPP92_003938 Vanilla planifolia HOM05D004541 ORTHO05D006163 3.5e-44 182.6 153 55.6
ATR0315G070 Amborella trichopoda HOM05D004541 ORTHO05D006163 3.8e-43 179.1 218 45.0
CDE05G1732 Ceratophyllum demersum HOM05D004541 ORTHO05D006163 1.9e-42 176.8 219 44.7
Nitab4.5_0000754g0080 Nicotiana tabacum HOM05D004541 ORTHO05D006163 4.7e-41 172.2 108 72.2
SEGI_28317 Sequoiadendron giganteum HOM05D004541 ORTHO05D006163 1.3e-35 154.1 124 58.9
Mapoly0155s0018 Marchantia polymorpha HOM05D004541 ORTHO05D006163 3.6e-33 146.0 299 34.4
Dinv36641 Davidia involucrata HOM05D004541 ORTHO05D006163 2.6e-31 139.8 169 49.7
SEGI_08862 Sequoiadendron giganteum HOM05D004541 ORTHO05D006163 1.1e-29 134.4 235 37.4
BcaC04g19361 Brassica carinata HOM05D002433 ORTHO05D003234 9.1e-29 131.3 102 61.8
C09p56520 Brassica napus HOM05D004541 ORTHO05D006163 9.1e-29 131.3 102 61.8
BolC9t58517H Brassica oleracea HOM05D004541 ORTHO05D006163 2.0e-28 130.2 105 60.0
SMO347G0168 Selaginella moellendorffii HOM05D004541 ORTHO05D006163 2.2e-27 126.7 122 50.8
CBR_g30889 Chara braunii HOM05D001523 ORTHO05D000184 1.4e-24 117.5 93 59.1
Pp3c3_30280 Physcomitrium patens HOM05D004541 ORTHO05D006163 1.9e-10 70.5 211 28.9
Actinidia32680 Actinidia chinensis HOM05D004541 ORTHO05D006163 5.2e-08 62.4 55 60.0
MCO08G100 Micromonas commoda HOM05D004541 ORTHO05D006163 6.8e-08 62.0 101 33.7
PRCOL_00005929 Prasinoderma coloniale HOM05D004541 ORTHO05D006163 1.7e-06 57.4 96 33.3


User provided reference genes

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