Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 1.8e-67 259.2 142 100.0
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 1.1e-53 213.4 127 92.9
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 6.1e-39 164.5 141 66.0
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 7.7e-34 147.5 141 60.3
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 5.5e-32 141.4 135 60.7
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 3.0e-30 135.6 141 58.2
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 5.2e-30 134.8 141 56.7
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 8.8e-30 134.0 145 57.9
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 1.5e-29 133.3 143 54.5
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 1.5e-29 133.3 141 54.6
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 5.7e-29 131.3 141 58.2
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 7.5e-29 131.0 142 58.5
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 1.3e-28 130.2 141 53.2
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 3.7e-28 128.6 141 56.7
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 8.2e-28 127.5 141 52.5
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 1.1e-27 127.1 141 52.5
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 1.4e-27 126.7 147 55.1
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 1.8e-27 126.3 143 55.9
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 7.0e-27 124.4 141 52.5
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 7.0e-27 124.4 142 53.5
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 3.5e-26 122.1 141 51.1
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 3.5e-26 122.1 141 55.3
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 3.5e-26 122.1 141 53.9
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 5.9e-26 121.3 142 54.9
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 1.0e-25 120.6 154 51.3
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 5.0e-25 118.2 144 52.8
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 5.0e-25 118.2 144 52.8
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 8.5e-25 117.5 136 54.4
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 8.5e-25 117.5 137 52.6
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 1.1e-24 117.1 147 52.4
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 1.9e-24 116.3 142 56.3
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 3.2e-24 115.5 142 52.1
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 5.5e-24 114.8 135 51.9
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 7.2e-24 114.4 141 49.6
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 9.4e-24 114.0 143 53.1
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 1.2e-23 113.6 141 52.5
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 1.6e-23 113.2 144 52.8
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 2.1e-23 112.8 141 51.8
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 2.7e-23 112.5 143 50.3
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 3.6e-23 112.1 145 51.7
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 3.6e-23 112.1 145 51.0
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 3.6e-23 112.1 141 50.4
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 1.0e-22 110.5 137 51.1
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 1.4e-22 110.2 141 50.4
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 6.8e-22 107.8 140 50.7
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 6.8e-22 107.8 141 51.1
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 8.8e-22 107.5 145 51.0
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 2.6e-21 105.9 145 47.6
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 3.4e-21 105.5 141 48.2
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 5.7e-21 104.8 144 49.3
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 1.7e-20 103.2 149 47.7
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 1.7e-20 103.2 141 50.4
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 2.2e-20 102.8 103 59.2
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 2.2e-20 102.8 142 50.0
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 2.2e-20 102.8 142 48.6
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 2.8e-20 102.4 146 48.6
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 3.7e-20 102.1 141 48.9
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 4.8e-20 101.7 141 48.2
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 8.3e-20 100.9 102 59.8
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 5.4e-19 98.2 133 48.9
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 1.2e-18 97.1 103 57.3
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 1.6e-18 96.7 141 45.4
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 3.5e-18 95.5 145 45.5
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 4.5e-18 95.1 141 44.7
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 5.9e-18 94.7 141 48.9
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 5.9e-18 94.7 140 45.7
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 7.7e-18 94.4 209 36.8
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 7.7e-18 94.4 108 53.7
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 7.7e-18 94.4 103 55.3
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 1.0e-17 94.0 133 45.1
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 1.7e-17 93.2 105 51.4
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 5.0e-17 91.7 148 45.3
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 4.2e-16 88.6 100 52.0
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 9.5e-16 87.4 140 42.1
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 4.7e-15 85.1 143 42.7
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 8.0e-15 84.3 103 50.5
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 2.3e-14 82.8 142 40.1
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 4.0e-14 82.0 143 44.1
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 4.0e-14 82.0 143 44.1
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 6.8e-14 81.3 136 40.4
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 8.9e-14 80.9 145 40.0
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 1.5e-13 80.1 143 42.7
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 3.4e-13 79.0 237 31.6
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 4.4e-13 78.6 140 40.0
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 4.4e-13 78.6 147 41.5
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 5.7e-13 78.2 147 37.4
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 5.7e-13 78.2 140 40.7
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 5.7e-13 78.2 126 42.1
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 7.5e-13 77.8 140 40.0
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 7.5e-13 77.8 140 40.0
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 9.8e-13 77.4 150 38.7
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 8.3e-12 74.3 57 70.2
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 1.8e-11 73.2 142 40.8
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 3.1e-11 72.4 110 49.1
Haze_15170 Corylus avellana HOM05D006676 ORTHO05D008394 3.1e-11 72.4 190 35.3
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 3.1e-11 72.4 177 34.5
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 7.0e-11 71.2 142 39.4
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 1.0e-09 67.4 57 61.4
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 1.3e-09 67.0 140 37.9
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 1.3e-09 67.0 140 37.9
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 1.3e-09 67.0 141 38.3
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 1.3e-09 67.0 119 40.3
arahy.Tifrunner.gnm1.ann1.9JJG5X Arachis hypogaea HOM05D006676 ORTHO05D008394 2.9e-09 65.9 128 41.4
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 6.6e-09 64.7 140 37.9
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 6.1e-07 58.2 141 36.9
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 8.0e-07 57.8 57 54.4
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 3.0e-06 55.8 103 42.7


User provided reference genes

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