Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 1.2e-100 369.8 175 100.0
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 4.5e-68 261.5 181 70.7
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 8.8e-64 247.3 186 65.1
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 4.4e-63 245.0 179 67.6
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 4.4e-63 245.0 179 67.6
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 7.4e-63 244.2 182 65.9
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 1.7e-62 243.0 178 68.0
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 3.7e-62 241.9 180 66.1
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 2.4e-61 239.2 183 65.6
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 3.1e-61 238.8 176 64.2
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 3.1e-61 238.8 139 77.7
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 1.2e-60 236.9 149 75.2
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 2.0e-60 236.1 139 77.7
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 2.0e-60 236.1 177 62.1
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 2.0e-60 236.1 139 78.4
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 1.7e-59 233.0 182 63.7
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 2.2e-59 232.6 178 62.9
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 5.0e-59 231.5 134 79.1
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 8.5e-59 230.7 160 66.2
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 8.5e-59 230.7 130 80.0
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 4.2e-58 228.4 139 74.8
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 4.2e-58 228.4 175 62.3
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 4.2e-58 228.4 138 76.8
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 4.2e-58 228.4 132 77.3
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 1.2e-57 226.9 137 74.5
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 2.1e-57 226.1 140 72.1
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 2.7e-57 225.7 150 68.7
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 2.7e-57 225.7 150 68.0
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 4.7e-57 224.9 150 68.0
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 4.7e-57 224.9 180 61.7
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 6.1e-57 224.6 150 67.3
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 6.1e-57 224.6 178 61.8
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 8.0e-57 224.2 170 64.1
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 8.0e-57 224.2 167 66.5
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 1.0e-56 223.8 138 75.4
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 2.3e-56 222.6 139 70.5
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 2.3e-56 222.6 173 63.0
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 3.0e-56 222.2 136 73.5
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 4.0e-56 221.9 171 63.7
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 4.0e-56 221.9 140 75.7
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 5.2e-56 221.5 176 60.2
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 5.2e-56 221.5 150 67.3
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 5.2e-56 221.5 173 64.2
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 6.8e-56 221.1 176 60.2
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 1.2e-55 220.3 181 59.1
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 1.2e-55 220.3 138 72.5
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 2.0e-55 219.5 210 55.7
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 2.6e-55 219.2 150 66.7
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 3.4e-55 218.8 150 67.3
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 5.7e-55 218.0 131 76.3
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 5.7e-55 218.0 151 66.9
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 9.8e-55 217.2 136 70.6
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 1.3e-54 216.9 132 75.8
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 2.2e-54 216.1 143 69.9
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 2.2e-54 216.1 143 69.9
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 3.7e-54 215.3 154 64.9
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 4.8e-54 214.9 136 69.9
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 8.3e-54 214.2 170 61.8
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 1.1e-53 213.8 175 57.7
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 1.4e-53 213.4 166 61.4
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 2.4e-53 212.6 138 70.3
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 4.1e-53 211.8 160 65.0
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 5.4e-53 211.5 143 69.9
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 7.0e-53 211.1 212 52.4
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 2.0e-52 209.5 160 61.2
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 2.0e-52 209.5 131 74.0
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 2.0e-52 209.5 112 83.0
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 4.5e-52 208.4 131 72.5
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 5.9e-52 208.0 139 67.6
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 5.9e-52 208.0 156 64.1
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 1.0e-51 207.2 188 57.4
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 2.2e-51 206.1 130 70.0
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 2.9e-51 205.7 127 77.2
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 8.5e-51 204.1 106 84.9
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 3.2e-50 202.2 126 74.6
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 7.2e-50 201.1 133 70.7
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 1.6e-49 199.9 117 76.9
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 2.1e-49 199.5 136 68.4
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 2.1e-49 199.5 134 67.9
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 3.6e-49 198.7 140 67.9
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 3.4e-47 192.2 170 55.3
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 2.2e-46 189.5 108 75.9
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 4.9e-46 188.3 126 68.3
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 8.3e-46 187.6 107 75.7
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 7.0e-45 184.5 107 74.8
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 8.6e-43 177.6 193 48.7
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 2.5e-42 176.0 102 73.5
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 4.7e-41 171.8 114 69.3
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 8.9e-40 167.5 120 64.2
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 5.4e-37 158.3 121 62.8
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 2.7e-36 156.0 95 70.5
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 3.5e-36 155.6 90 73.3
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 7.3e-34 147.9 122 54.1
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 4.7e-33 145.2 97 69.1
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 8.0e-33 144.4 113 56.6
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 1.0e-32 144.1 136 52.2
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 1.1e-29 134.0 138 51.4
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 3.9e-27 125.6 104 57.7
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 1.6e-25 120.2 115 47.0
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 1.6e-25 120.2 132 48.5
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 2.1e-25 119.8 173 36.4
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 6.2e-25 118.2 79 69.6
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 1.4e-24 117.1 68 75.0
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 2.6e-23 112.8 59 83.1
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 5.6e-18 95.1 95 47.4
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 4.1e-13 79.0 76 50.0
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 2.6e-07 59.7 42 57.1


User provided reference genes

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