Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 7.0e-165 583.9 307 100.0
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 7.6e-95 351.3 200 89.5
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 1.3e-94 350.5 208 85.1
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 3.8e-94 349.0 215 83.3
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 4.9e-94 348.6 215 81.4
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 6.4e-94 348.2 215 83.3
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 1.1e-93 347.4 202 87.1
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 1.1e-93 347.4 214 83.6
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 2.4e-93 346.3 203 86.7
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 4.2e-93 345.5 214 83.2
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 9.3e-93 344.4 263 70.0
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 1.2e-92 344.0 209 83.3
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 2.1e-92 343.2 203 83.7
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 2.1e-92 343.2 202 84.2
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 6.0e-92 341.7 212 80.7
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 7.9e-92 341.3 211 82.0
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 1.0e-91 340.9 212 81.1
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 1.0e-91 340.9 216 78.2
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 1.0e-91 340.9 205 83.9
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 1.3e-91 340.5 212 82.5
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 3.0e-91 339.3 214 79.9
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 3.9e-91 339.0 214 79.9
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 3.9e-91 339.0 214 79.9
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 5.1e-91 338.6 214 80.8
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 5.1e-91 338.6 212 79.7
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 8.7e-91 337.8 208 80.8
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 8.7e-91 337.8 202 84.2
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 1.1e-90 337.4 212 81.6
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 5.6e-90 335.1 201 85.6
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 9.6e-90 334.3 215 79.5
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 9.6e-90 334.3 212 78.8
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.3e-89 334.0 220 78.6
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 2.1e-89 333.2 194 87.1
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 2.1e-89 333.2 201 82.6
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 2.8e-89 332.8 206 82.0
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 4.8e-89 332.0 194 85.6
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 6.2e-89 331.6 208 81.2
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 1.4e-88 330.5 213 78.9
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 1.4e-88 330.5 191 88.5
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 1.4e-88 330.5 196 86.7
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 1.8e-88 330.1 217 77.9
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.8e-88 330.1 208 80.8
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 3.1e-88 329.3 205 81.0
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 3.1e-88 329.3 205 81.0
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 3.1e-88 329.3 217 77.9
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 3.1e-88 329.3 213 78.4
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 4.0e-88 328.9 210 81.0
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 5.3e-88 328.6 185 88.6
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 6.9e-88 328.2 196 83.2
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 6.9e-88 328.2 202 81.7
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 6.9e-88 328.2 188 87.8
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 6.9e-88 328.2 219 76.3
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 6.9e-88 328.2 211 80.6
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 9.0e-88 327.8 212 79.2
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.2e-87 327.4 202 80.7
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 1.2e-87 327.4 220 78.2
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 1.5e-87 327.0 201 81.1
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 2.0e-87 326.6 202 80.2
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 2.6e-87 326.2 214 78.0
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 2.6e-87 326.2 203 81.3
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 3.4e-87 325.9 212 78.8
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 3.4e-87 325.9 217 77.9
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 4.5e-87 325.5 200 85.5
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 7.6e-87 324.7 220 77.3
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 9.9e-87 324.3 219 76.3
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 1.3e-86 323.9 215 77.7
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 1.7e-86 323.6 198 83.3
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 4.9e-86 322.0 215 76.7
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 8.4e-86 321.2 190 86.8
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 8.4e-86 321.2 212 78.3
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 1.4e-85 320.5 219 76.7
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 1.9e-85 320.1 217 74.7
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 1.9e-85 320.1 191 86.9
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 2.4e-85 319.7 219 76.3
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 3.2e-85 319.3 218 74.3
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 1.2e-84 317.4 218 73.4
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 2.7e-84 316.2 218 73.4
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 2.7e-84 316.2 215 74.0
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 2.7e-84 316.2 218 73.9
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 4.6e-84 315.5 218 72.9
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 4.6e-84 315.5 218 72.9
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 6.0e-84 315.1 216 74.5
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 7.9e-84 314.7 213 76.1
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 1.0e-83 314.3 186 82.3
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 3.0e-83 312.8 216 73.6
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 3.0e-83 312.8 194 79.9
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 3.0e-83 312.8 194 80.4
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.1e-82 310.8 202 81.2
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 1.5e-82 310.5 215 72.6
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 2.5e-82 309.7 215 72.6
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 1.6e-81 307.0 215 71.6
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 1.6e-81 307.0 230 71.7
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 2.1e-81 306.6 202 79.2
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 8.1e-81 304.7 191 80.1
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 3.1e-80 302.8 263 69.2
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 2.6e-79 299.7 184 82.1
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.0e-78 297.7 211 73.9
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 1.1e-77 294.3 185 78.4
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 1.1e-77 294.3 191 75.4
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 3.9e-75 285.8 213 71.8
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 1.9e-74 283.5 203 71.4
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 1.0e-70 271.2 190 68.9
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.3e-70 270.8 202 72.8
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 3.3e-66 256.1 179 73.2
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 6.3e-65 251.9 188 63.3
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 5.3e-64 248.8 200 61.0
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 2.6e-63 246.5 221 56.1
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 5.1e-59 232.3 146 82.9
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 3.1e-56 223.0 207 61.4
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 1.0e-54 218.0 155 73.5
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 8.8e-51 204.9 136 77.9
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 4.1e-48 196.1 110 85.5
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 1.7e-46 190.7 226 44.7
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 2.1e-44 183.7 199 48.2
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 6.7e-43 178.7 194 52.6
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 2.6e-42 176.8 110 75.5
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 6.8e-35 152.1 188 43.1
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 3.5e-31 139.8 107 71.0
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 7.0e-24 115.5 83 72.3
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 8.3e-17 92.0 109 53.2
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 6.6e-14 82.4 93 55.9
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 6.6e-14 82.4 49 81.6
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 2.6e-10 70.5 44 75.0
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 1.7e-09 67.8 44 68.2
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 5.4e-08 62.8 65 56.9


User provided reference genes

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