Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold174G39270 Striga asiatica HOM05D000125 ORTHO05D000120 5.2e-192 674.1 314 100.0
SGA_v2.0_scaffold25G11205 Striga asiatica HOM05D000125 ORTHO05D000120 4.2e-56 222.6 98 96.9
SGA_v2.0_scaffold25G11203 Striga asiatica HOM05D000125 ORTHO05D000120 1.0e-46 191.4 98 81.6
SGA_v2.0_scaffold9G04972 Striga asiatica HOM05D000125 ORTHO05D000120 7.4e-45 185.3 87 94.3
SGA_v2.0_scaffold25G11039 Striga asiatica HOM05D000125 ORTHO05D000120 1.9e-29 134.0 96 58.3
SGA_v2.0_scaffold25G11043 Striga asiatica HOM05D000125 ORTHO05D000120 6.3e-28 129.0 90 60.0
SGA_v2.0_scaffold25G11052 Striga asiatica HOM05D000125 ORTHO05D000120 1.4e-27 127.9 92 57.6
SGA_v2.0_scaffold550G52868 Striga asiatica HOM05D000125 ORTHO05D000120 5.3e-27 125.9 84 64.3
SGA_v2.0_scaffold158G37506 Striga asiatica HOM05D000125 ORTHO05D000120 1.4e-24 117.9 86 61.6
SalBow6G6574 Salvia bowleyana HOM05D000125 ORTHO05D000120 6.7e-22 109.0 169 34.9
MSTRG.21294 Avicennia marina HOM05D000125 ORTHO05D000120 2.6e-18 97.1 155 34.8
SalBow6G4272 Salvia bowleyana HOM05D000125 ORTHO05D000120 1.2e-15 88.2 88 45.5
SalBow8G2251 Salvia bowleyana HOM05D000125 ORTHO05D000120 2.1e-15 87.4 95 43.2
SalBow8G5208 Salvia bowleyana HOM05D000125 ORTHO05D000120 2.1e-15 87.4 95 43.2
SalBow8G2214 Salvia bowleyana HOM05D000125 ORTHO05D000120 4.4e-13 79.7 135 31.1
SalBow8G1235 Salvia bowleyana HOM05D000125 ORTHO05D000120 1.3e-12 78.2 84 39.3
SalBow8G3592 Salvia bowleyana HOM05D000125 ORTHO05D000120 1.3e-12 78.2 89 38.2
Lj2A866T15 Lonicera japonica HOM05D000125 ORTHO05D000120 2.4e-11 73.9 130 32.3
SalBow8G1041 Salvia bowleyana HOM05D000125 ORTHO05D000120 3.1e-11 73.6 173 31.2
Actinidia39190 Actinidia chinensis HOM05D000125 ORTHO05D000120 9.1e-11 72.0 132 29.5
MSTRG.21292 Avicennia marina HOM05D000125 ORTHO05D000120 5.9e-10 69.3 57 49.1
Lj2A850T4 Lonicera japonica HOM05D000125 ORTHO05D000120 1.7e-09 67.8 130 28.5
Lj2A865T14 Lonicera japonica HOM05D000125 ORTHO05D000120 1.7e-09 67.8 124 30.6
Dinv39597 Davidia involucrata HOM05D000125 ORTHO05D000120 5.0e-09 66.2 89 34.8
Lj2C357T13 Lonicera japonica HOM05D000125 ORTHO05D000120 1.1e-08 65.1 125 29.6
Dinv18125 Davidia involucrata HOM05D000125 ORTHO05D000120 7.2e-08 62.4 75 40.0
Cc08_g04890 Coffea canephora HOM05D000125 ORTHO05D000120 2.7e-07 60.5 91 35.2
Actinidia39188 Actinidia chinensis HOM05D000125 ORTHO05D000120 1.0e-06 58.5 68 33.8
Cc02_g33580 Coffea canephora HOM05D000125 ORTHO05D000120 1.0e-06 58.5 151 25.8
Cc08_g04990 Coffea canephora HOM05D000125 ORTHO05D000120 1.0e-06 58.5 100 33.0
Cc08_g04790 Coffea canephora HOM05D000125 ORTHO05D000120 2.3e-06 57.4 91 33.0
Gohir.D10G222900 Gossypium hirsutum HOM05D000125 ORTHO05D000120 4.0e-06 56.6 89 32.6
Gorai.011G253600 Gossypium raimondii HOM05D000125 ORTHO05D000120 8.8e-06 55.5 92 31.5
HanXRQChr05g0144911 Helianthus annuus HOM05D000125 ORTHO05D000120 8.8e-06 55.5 116 27.6


User provided reference genes

Program Settings