Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold173G39161 Striga asiatica HOM05D000932 ORTHO05D000729 9.8e-86 320.1 161 100.0
MSTRG.11970 Avicennia marina HOM05D000932 ORTHO05D000729 9.7e-25 117.5 162 48.1
Dinv38920 Davidia involucrata HOM05D000932 ORTHO05D000729 3.6e-19 99.0 184 40.8
Migut.A00747 Erythranthe guttata HOM05D000932 ORTHO05D000729 7.9e-19 97.8 184 45.7
Hma1.2p1_1123F.1_g259400 Hydrangea macrophylla HOM05D000932 ORTHO05D000729 2.3e-18 96.3 194 41.2
Oeu059560.1 Olea europaea HOM05D000932 ORTHO05D000729 3.3e-17 92.4 186 40.3
Oeu061387.1 Olea europaea HOM05D000932 ORTHO05D000729 4.4e-17 92.0 173 39.3
Cc08_g15020 Coffea canephora HOM05D000932 ORTHO05D000729 1.7e-16 90.1 205 37.1
Nitab4.5_0004114g0060 Nicotiana tabacum HOM05D000932 ORTHO05D000729 1.1e-15 87.4 189 39.7
Actinidia33741 Actinidia chinensis HOM05D000932 ORTHO05D000729 2.4e-15 86.3 177 38.4
Peaxi162Scf00074g02025 Petunia axillaris HOM05D000932 ORTHO05D000729 3.1e-15 85.9 187 38.0
Nitab4.5_0001522g0030 Nicotiana tabacum HOM05D000932 ORTHO05D000729 9.1e-15 84.3 185 39.5
CAN.G532.9 Capsicum annuum HOM05D000932 ORTHO05D000729 3.8e-13 79.0 182 37.4
Hma1.2p1_0377F.1_g139450 Hydrangea macrophylla HOM05D000932 ORTHO05D000729 3.8e-13 79.0 174 36.2
Rhsim07G0088500 Rhododendron simsii HOM05D000932 ORTHO05D000729 8.5e-13 77.8 180 39.4
Lj8A218T21 Lonicera japonica HOM05D000932 ORTHO05D000729 1.4e-12 77.0 159 39.0
Ciclev10021189m.g Citrus clementina HOM05D000932 ORTHO05D000729 1.9e-12 76.6 195 37.9
QL12p032366 Quercus lobata HOM05D000932 ORTHO05D000729 5.5e-12 75.1 96 51.0
Sabra01G0076200 Salix brachista HOM05D000932 ORTHO05D000729 2.7e-11 72.8 184 37.5
CiPaw.12G090900 Carya illinoinensis HOM05D000932 ORTHO05D000729 3.6e-11 72.4 205 31.2
Potri.001G101200 Populus trichocarpa HOM05D000932 ORTHO05D000729 3.6e-11 72.4 95 50.5
CSS0007952 Camellia sinensis var. sinensis HOM05D000932 ORTHO05D000729 4.7e-11 72.0 192 33.9
Lsat_1_v5_gn_6_85380 Lactuca sativa HOM05D000932 ORTHO05D000729 4.7e-11 72.0 191 30.4
Solyc08g081350.2 Solanum lycopersicum HOM05D000932 ORTHO05D000729 1.8e-10 70.1 201 34.8
PGSC0003DMG400012193 Solanum tuberosum HOM05D000932 ORTHO05D000729 1.8e-10 70.1 200 35.5
Manes.01G060500 Manihot esculenta HOM05D000932 ORTHO05D000729 6.7e-10 68.2 191 35.1
Lsat_1_v5_gn_6_4580 Lactuca sativa HOM05D000932 ORTHO05D000729 4.4e-09 65.5 203 29.1
Potri.003G130500 Populus trichocarpa HOM05D000932 ORTHO05D000729 5.7e-09 65.1 212 33.0
Prupe.5G104100 Prunus persica HOM05D000932 ORTHO05D000729 5.7e-09 65.1 204 32.8
Duzib205G0545 Durio zibethinus HOM05D000932 ORTHO05D000729 9.7e-09 64.3 98 43.9
Oeu014306.1 Olea europaea HOM05D000932 ORTHO05D000729 2.2e-08 63.2 97 42.3
Thecc.03G282900 Theobroma cacao HOM05D000932 ORTHO05D000729 4.8e-08 62.0 98 45.9
Lalb_Chr05g0224621 Lupinus albus HOM05D000932 ORTHO05D000729 6.3e-08 61.6 160 33.8
Gohir.D09G186300 Gossypium hirsutum HOM05D000932 ORTHO05D000729 1.1e-07 60.8 95 42.1
Gorai.006G209000 Gossypium raimondii HOM05D000932 ORTHO05D000729 1.1e-07 60.8 95 42.1
TWI60G0720 Tripterygium wilfordii HOM05D000932 ORTHO05D000729 1.1e-07 60.8 96 44.8
Haze_08815 Corylus avellana HOM05D000932 ORTHO05D000729 1.4e-07 60.5 212 32.5
DCAR_008365 Daucus carota HOM05D000932 ORTHO05D000729 1.4e-07 60.5 184 31.0
PGR042G2581 Punica granatum HOM05D000932 ORTHO05D000729 1.4e-07 60.5 101 41.6
Sopen08g029670 Solanum pennellii HOM05D000932 ORTHO05D000729 1.4e-07 60.5 107 43.0
ECA240G4070 Erigeron canadensis HOM05D000932 ORTHO05D000729 1.8e-07 60.1 94 38.3
HanXRQChr03g0085921 Helianthus annuus HOM05D000932 ORTHO05D000729 2.4e-07 59.7 192 30.7
LjContig00312_ERROPOS870357g0008521 Lotus japonicus HOM05D000932 ORTHO05D000729 2.4e-07 59.7 184 32.6
MD14G1109100 Malus domestica HOM05D000932 ORTHO05D000729 2.4e-07 59.7 172 34.3
Oeu007741.1 Olea europaea HOM05D000932 ORTHO05D000729 2.4e-07 59.7 180 33.3
VMungo1215G1926 Vigna mungo HOM05D000932 ORTHO05D000729 3.1e-07 59.3 92 45.7
RcHm_v2.0_Chr7g0197051 Rosa chinensis HOM05D000932 ORTHO05D000729 4.1e-07 58.9 211 32.2
Cfa012201 Carpinus fangiana HOM05D000932 ORTHO05D000729 7.0e-07 58.2 208 32.7
Hund11451 Selenicereus undatus HOM05D000932 ORTHO05D000729 9.1e-07 57.8 105 42.9
arahy.Tifrunner.gnm1.ann1.AGT1RS Arachis hypogaea HOM05D000932 ORTHO05D000729 1.2e-06 57.4 167 32.3
MD06G1088000 Malus domestica HOM05D000932 ORTHO05D000729 1.2e-06 57.4 200 33.0
Atru.chr9.2152 Acer truncatum HOM05D000932 ORTHO05D000729 2.0e-06 56.6 97 44.3
FAN26G2342 Fragaria x ananassa HOM05D000932 ORTHO05D000729 3.5e-06 55.8 207 30.4
Phvul.002G158500 Phaseolus vulgaris HOM05D000932 ORTHO05D000729 4.5e-06 55.5 96 42.7
TAR629G1819 Trochodendron aralioides HOM05D000932 ORTHO05D000729 5.9e-06 55.1 94 41.5
Gohir.A09G192000 Gossypium hirsutum HOM05D000932 ORTHO05D000729 7.7e-06 54.7 174 31.6


User provided reference genes

Program Settings