Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold173G39139 Striga asiatica HOM05D005438 ORTHO05D006744 2.0e-209 732.3 387 100.0
Migut.J01399 Erythranthe guttata HOM05D005438 ORTHO05D006744 7.0e-130 468.0 402 65.7
Migut.A00720 Erythranthe guttata HOM05D005438 ORTHO05D006744 3.9e-120 435.6 399 61.9
GSVIVG01019417001 Vitis vinifera HOM05D005438 ORTHO05D006744 6.2e-110 401.7 398 58.0
PGSC0003DMG400012320 Solanum tuberosum HOM05D005438 ORTHO05D006744 2.3e-109 399.8 394 57.6
MD14G1111900 Malus domestica HOM05D005438 ORTHO05D006744 5.8e-108 395.2 394 57.9
CAN.G532.38 Capsicum annuum HOM05D005438 ORTHO05D006744 3.7e-107 392.5 394 56.1
RcHm_v2.0_Chr7g0196591 Rosa chinensis HOM05D005438 ORTHO05D006744 2.4e-106 389.8 392 56.9
Nitab4.5_0007906g0070 Nicotiana tabacum HOM05D005438 ORTHO05D006744 3.2e-106 389.4 394 56.1
Solyc08g081580.4 Solanum lycopersicum HOM05D005438 ORTHO05D006744 3.2e-106 389.4 394 56.9
FAN18G2027 Fragaria x ananassa HOM05D005438 ORTHO05D006744 5.4e-106 388.7 391 56.8
Dinv37597 Davidia involucrata HOM05D005438 ORTHO05D006744 7.1e-106 388.3 401 58.4
FvH4_5g03190 Fragaria vesca HOM05D005438 ORTHO05D006744 9.2e-106 387.9 391 56.8
FAN08G1515 Fragaria x ananassa HOM05D005438 ORTHO05D006744 9.2e-106 387.9 396 56.1
FAN13G0364 Fragaria x ananassa HOM05D005438 ORTHO05D006744 2.1e-105 386.7 391 56.3
Sopen08g029890 Solanum pennellii HOM05D005438 ORTHO05D006744 2.7e-105 386.3 394 57.6
Prupe.5G106500 Prunus persica HOM05D005438 ORTHO05D006744 3.5e-105 386.0 394 56.6
Actinidia10609 Actinidia chinensis HOM05D005438 ORTHO05D006744 4.6e-105 385.6 408 55.6
Cc08_g15250 Coffea canephora HOM05D005438 ORTHO05D006744 6.0e-105 385.2 404 54.7
Nitab4.5_0003015g0090 Nicotiana tabacum HOM05D005438 ORTHO05D006744 7.8e-105 384.8 394 55.3
Peaxi162Scf00074g01737 Petunia axillaris HOM05D005438 ORTHO05D006744 2.3e-104 383.3 395 54.4
FAN04G0810 Fragaria x ananassa HOM05D005438 ORTHO05D006744 1.1e-103 380.9 397 55.4
Rhsim02G0235700 Rhododendron simsii HOM05D005438 ORTHO05D006744 1.1e-101 374.4 407 53.6
Hund11433 Selenicereus undatus HOM05D005438 ORTHO05D006744 3.1e-101 372.9 400 54.0
AUR62019752 Chenopodium quinoa HOM05D005438 ORTHO05D006744 4.0e-101 372.5 394 52.8
Duzib084G0802 Durio zibethinus HOM05D005438 ORTHO05D006744 8.9e-101 371.3 400 54.5
Atru.chr9.2115 Acer truncatum HOM05D005438 ORTHO05D006744 1.2e-100 370.9 405 55.8
CiPaw.11G129800 Carya illinoinensis HOM05D005438 ORTHO05D006744 1.5e-100 370.5 400 54.5
Thecc.03G286500 Theobroma cacao HOM05D005438 ORTHO05D006744 1.5e-100 370.5 399 54.9
TAR374G1319 Trochodendron aralioides HOM05D005438 ORTHO05D006744 1.5e-100 370.5 396 55.3
MELO3C005715.2 Cucumis melo HOM05D005438 ORTHO05D006744 9.9e-100 367.9 401 53.9
CsaV3_5G002390 Cucumis sativus L. HOM05D005438 ORTHO05D006744 1.3e-99 367.5 405 53.8
Manes.01G057900 Manihot esculenta HOM05D005438 ORTHO05D006744 1.3e-99 367.5 430 51.6
Sed0027839 Sechium edule HOM05D005438 ORTHO05D006744 1.3e-99 367.5 394 53.3
CSS0046697 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 4.9e-99 365.5 402 55.5
Gohir.D03G078500 Gossypium hirsutum HOM05D005438 ORTHO05D006744 4.9e-99 365.5 409 53.3
ECA233G5263 Erigeron canadensis HOM05D005438 ORTHO05D006744 6.4e-99 365.2 402 54.2
COL.COLO4_08362 Corchorus olitorius HOM05D005438 ORTHO05D006744 1.1e-98 364.4 396 53.3
Gohir.D12G233900 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.1e-98 364.4 401 54.6
Gorai.008G250200 Gossypium raimondii HOM05D005438 ORTHO05D006744 1.4e-98 364.0 401 54.9
QL12p031793 Quercus lobata HOM05D005438 ORTHO05D006744 3.2e-98 362.8 434 50.5
TWI60G1446 Tripterygium wilfordii HOM05D005438 ORTHO05D006744 3.2e-98 362.8 402 54.0
CANSAT21G0041 Cannabis sativa HOM05D005438 ORTHO05D006744 4.2e-98 362.5 399 53.1
Gohir.A02G105300 Gossypium hirsutum HOM05D005438 ORTHO05D006744 4.2e-98 362.5 409 53.1
DCAR_004611 Daucus carota HOM05D005438 ORTHO05D006744 7.1e-98 361.7 402 54.2
Lalb_Chr05g0224491 Lupinus albus HOM05D005438 ORTHO05D006744 1.6e-97 360.5 398 55.5
arahy.Tifrunner.gnm1.ann1.I29YTG Arachis hypogaea HOM05D005438 ORTHO05D006744 6.0e-97 358.6 398 52.5
arahy.Tifrunner.gnm1.ann1.Y7QUAU Arachis hypogaea HOM05D005438 ORTHO05D006744 7.8e-97 358.2 397 52.6
Gorai.003G085600 Gossypium raimondii HOM05D005438 ORTHO05D006744 7.8e-97 358.2 409 52.8
Medtr8g098940 Medicago truncatula HOM05D005438 ORTHO05D006744 1.0e-96 357.8 405 53.8
Phvul.002G293100 Phaseolus vulgaris HOM05D005438 ORTHO05D006744 1.7e-96 357.1 399 51.4
Ciclev10020644m.g Citrus clementina HOM05D005438 ORTHO05D006744 3.9e-96 355.9 404 52.5
Aa31LG2G1070 Aethionema arabicum HOM05D005438 ORTHO05D006744 5.1e-96 355.5 405 53.8
HanXRQChr02g0049721 Helianthus annuus HOM05D005438 ORTHO05D006744 6.6e-96 355.1 399 53.4
Glyma.08G018100 Glycine max HOM05D005438 ORTHO05D006744 1.1e-95 354.4 396 53.3
Ca_10950_v3 Cicer arietinum L. HOM05D005438 ORTHO05D006744 1.5e-95 354.0 400 52.0
AUR62010754 Chenopodium quinoa HOM05D005438 ORTHO05D006744 1.9e-95 353.6 394 51.0
Lsat_1_v5_gn_3_8761 Lactuca sativa HOM05D005438 ORTHO05D006744 7.3e-95 351.7 399 53.4
Atru.BG.199.p Acer truncatum HOM05D005438 ORTHO05D006744 9.6e-95 351.3 397 54.2
Psat7g029680 Pisum sativum HOM05D005438 ORTHO05D006744 1.2e-94 350.9 398 52.3
Nn1g01673 Nelumbo nucifera HOM05D005438 ORTHO05D006744 1.6e-94 350.5 420 50.5
Sabra03G0095000 Salix brachista HOM05D005438 ORTHO05D006744 1.6e-94 350.5 439 48.5
Aqoxy7G00195 Aquilegia oxysepala HOM05D005438 ORTHO05D006744 2.1e-94 350.1 409 51.6
Potri.003G132600 Populus trichocarpa HOM05D005438 ORTHO05D006744 2.1e-94 350.1 438 47.9
Eucgr.L02379 Eucalyptus grandis HOM05D005438 ORTHO05D006744 2.8e-94 349.7 399 53.1
Ah.12g051920 Amaranthus hybridus HOM05D005438 ORTHO05D006744 3.6e-94 349.4 412 51.9
Lj2C178T12 Lonicera japonica HOM05D005438 ORTHO05D006744 3.6e-94 349.4 404 51.0
THA.LOC104817794 Tarenaya hassleriana HOM05D005438 ORTHO05D006744 3.6e-94 349.4 411 53.5
BcaB07g31422 Brassica carinata HOM05D005438 ORTHO05D006744 4.7e-94 349.0 425 49.4
Eucgr.D01812 Eucalyptus grandis HOM05D005438 ORTHO05D006744 4.7e-94 349.0 399 53.1
Lj4g0011941 Lotus japonicus HOM05D005438 ORTHO05D006744 4.7e-94 349.0 405 50.9
Thhalv10023525m.g Eutrema salsugineum HOM05D005438 ORTHO05D006744 1.4e-93 347.4 413 51.1
VMungo0251G0328 Vigna mungo HOM05D005438 ORTHO05D006744 1.8e-93 347.1 399 51.4
PGR031G2565 Punica granatum HOM05D005438 ORTHO05D006744 3.1e-93 346.3 397 51.6
BcaC04g22661 Brassica carinata HOM05D005438 ORTHO05D006744 9.0e-93 344.7 423 49.9
Duzib205G0010 Durio zibethinus HOM05D005438 ORTHO05D006744 1.2e-92 344.4 397 52.1
Carub.0002s0086 Capsella rubella HOM05D005438 ORTHO05D006744 2.6e-92 343.2 416 50.0
A09p14060 Brassica napus HOM05D005438 ORTHO05D006744 9.9e-92 341.3 419 51.6
AL2G11130 Arabidopsis lyrata HOM05D005438 ORTHO05D006744 1.7e-91 340.5 419 50.4
AT1G63980 Arabidopsis thaliana HOM05D005438 ORTHO05D006744 1.7e-91 340.5 422 49.1
Glyma.05G211800 Glycine max HOM05D005438 ORTHO05D006744 1.7e-91 340.5 397 51.1
vmacro11410 Vaccinium macrocarpon HOM05D005438 ORTHO05D006744 2.2e-91 340.1 402 52.7
BcaB07g31532 Brassica carinata HOM05D005438 ORTHO05D006744 3.8e-91 339.3 431 49.0
CARHR047000 Cardamine hirsuta HOM05D005438 ORTHO05D006744 3.8e-91 339.3 410 49.0
unitig_32.g10979 Utricularia gibba HOM05D005438 ORTHO05D006744 1.1e-90 337.8 359 56.0
EL10Ac5g12834 Beta vulgaris HOM05D005438 ORTHO05D006744 1.4e-90 337.4 379 52.8
TPR.G12953 Trifolium pratense HOM05D005438 ORTHO05D006744 4.6e-89 332.4 399 49.9
HanXRQChr17g0533211 Helianthus annuus HOM05D005438 ORTHO05D006744 7.8e-89 331.6 383 54.8
Sp2g00710 Schrenkiella parvula HOM05D005438 ORTHO05D006744 1.0e-88 331.3 433 48.0
A09p15160 Brassica napus HOM05D005438 ORTHO05D006744 1.3e-88 330.9 429 50.3
BraA09t37053Z Brassica rapa HOM05D005438 ORTHO05D006744 2.3e-88 330.1 426 50.7
C09p16950 Brassica napus HOM05D005438 ORTHO05D006744 3.0e-88 329.7 425 49.2
BolC9t54592H Brassica oleracea HOM05D005438 ORTHO05D006744 4.3e-87 325.9 427 48.7
MBI11_g09068_MAGBIO Magnolia biondii HOM05D005438 ORTHO05D006744 7.3e-87 325.1 386 51.0
ClCG01G002320 Citrullus lanatus HOM05D005438 ORTHO05D006744 4.8e-86 322.4 401 48.1
Zm00001eb001860 Zea mays HOM05D005438 ORTHO05D006744 4.8e-86 322.4 417 47.7
C09p18360 Brassica napus HOM05D005438 ORTHO05D006744 6.2e-86 322.0 432 48.4
Gohir.A12G233400 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.1e-85 321.2 390 50.8
BraA09t37158Z Brassica rapa HOM05D005438 ORTHO05D006744 4.0e-85 319.3 435 47.4
PSO478G3903 Papaver somniferum HOM05D005438 ORTHO05D006744 1.5e-84 317.4 421 48.7
MD06G1091000 Malus domestica HOM05D005438 ORTHO05D006744 3.4e-84 316.2 394 48.5
BolC9t54729H Brassica oleracea HOM05D005438 ORTHO05D006744 9.9e-84 314.7 435 47.4
PSO266G0069 Papaver somniferum HOM05D005438 ORTHO05D006744 8.4e-83 311.6 420 48.8
Os03g0125300 Oryza sativa ssp. japonica HOM05D005438 ORTHO05D006744 5.4e-82 308.9 415 48.2
Sc01g0009850 Simmondsia chinensis HOM05D005438 ORTHO05D006744 7.9e-81 305.1 335 51.3
PSO017G3503 Papaver somniferum HOM05D005438 ORTHO05D006744 1.0e-80 304.7 422 48.1
ATR0661G541 Amborella trichopoda HOM05D005438 ORTHO05D006744 6.7e-80 302.0 427 45.7
HPP92_021018 Vanilla planifolia HOM05D005438 ORTHO05D006744 2.0e-76 290.4 405 46.7
CSS0015982 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 9.3e-74 281.6 401 48.1
SEGI_20773 Sequoiadendron giganteum HOM05D005438 ORTHO05D006744 2.8e-70 270.0 460 39.3
CDE04G0809 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 3.7e-70 269.6 405 46.2
Haze_08758 Corylus avellana HOM05D005438 ORTHO05D006744 1.8e-56 224.2 306 46.1
SMO134G0098 Selaginella moellendorffii HOM05D005438 ORTHO05D006744 3.7e-54 216.5 386 37.3
BcaC04g22519 Brassica carinata HOM05D005438 ORTHO05D006744 8.8e-48 195.3 273 46.9
Lsat_1_v5_gn_1_49360 Lactuca sativa HOM05D005438 ORTHO05D006744 1.8e-45 187.6 190 56.8
Lsat_1_v5_gn_5_103140 Lactuca sativa HOM05D005438 ORTHO05D006744 1.8e-45 187.6 190 56.8
Lsat_1_v5_gn_9_38321 Lactuca sativa HOM05D005438 ORTHO05D006744 1.8e-45 187.6 190 56.8
Pp3c2_28530 Physcomitrium patens HOM05D005438 ORTHO05D006744 4.1e-45 186.4 432 33.8
SHI31900 Sapria himalayana HOM05D005438 ORTHO05D006744 2.3e-40 170.6 301 38.9
AagrBONN_evm.TU.Sc2ySwM_344.4712 Anthoceros agrestis HOM05D005438 ORTHO05D006744 1.5e-39 167.9 555 29.0
Mapoly0090s0083 Marchantia polymorpha HOM05D005438 ORTHO05D006744 7.4e-39 165.6 514 33.9
CSS0040427 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 1.8e-32 144.4 172 51.2
Actinidia28345 Actinidia chinensis HOM05D005438 ORTHO05D006744 3.0e-32 143.7 399 34.1
Cpa.g.sc631.4 Carica papaya HOM05D005438 ORTHO05D006744 2.6e-31 140.6 172 49.4
Pp3c7_27020 Physcomitrium patens HOM05D005438 ORTHO05D006744 8.3e-30 135.6 417 28.8
Cpa.g.c39085 Carica papaya HOM05D005438 ORTHO05D006744 1.8e-29 134.4 136 54.4
BcaNung05361 Brassica carinata HOM05D005438 ORTHO05D006744 4.5e-28 129.8 192 45.3
CDE12G0222 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 4.0e-24 116.7 172 45.3
CBR_g35011 Chara braunii HOM05D005438 ORTHO05D006744 7.7e-20 102.4 347 29.4
ATR0661G444 Amborella trichopoda HOM05D005438 ORTHO05D006744 8.6e-19 99.0 194 37.1
ECA246G3112 Erigeron canadensis HOM05D005438 ORTHO05D006744 2.2e-14 84.3 83 54.2
Cre07.g347300 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D021338 5.4e-13 79.7 402 24.9
Cre07.g347400 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 5.4e-13 79.7 402 24.9
ClCG01G002340 Citrullus lanatus HOM05D005438 ORTHO05D006744 5.8e-07 59.7 128 34.4
HanXRQChr16g0521071 Helianthus annuus HOM05D005438 ORTHO05D006744 3.7e-06 57.0 73 45.2
MCO11G547 Micromonas commoda HOM05D005438 ORTHO05D006744 4.9e-06 56.6 314 25.5


User provided reference genes

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