Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 2.0e-144 515.8 259 100.0
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 6.2e-66 255.0 160 78.1
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 6.5e-63 245.0 151 77.5
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 5.5e-62 241.9 160 75.6
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 5.5e-62 241.9 160 76.2
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 7.9e-61 238.0 160 74.4
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 2.3e-60 236.5 160 72.5
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 3.9e-60 235.7 160 72.5
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 8.7e-60 234.6 165 70.3
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 8.7e-60 234.6 157 73.9
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 1.1e-59 234.2 160 71.9
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 1.5e-59 233.8 160 70.6
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 1.9e-59 233.4 157 72.0
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 1.9e-59 233.4 157 72.0
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 2.5e-59 233.0 160 71.2
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 3.3e-59 232.6 160 71.2
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 3.3e-59 232.6 160 71.2
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 4.3e-59 232.3 160 70.6
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 5.7e-59 231.9 160 71.9
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 5.7e-59 231.9 160 71.9
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 5.7e-59 231.9 160 71.9
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 7.4e-59 231.5 157 71.3
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 9.7e-59 231.1 160 72.5
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 1.3e-58 230.7 160 72.5
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 1.6e-58 230.3 160 71.2
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 4.8e-58 228.8 157 72.0
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 8.2e-58 228.0 160 68.1
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 8.2e-58 228.0 160 70.6
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 8.2e-58 228.0 160 71.2
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 8.2e-58 228.0 157 70.7
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 8.2e-58 228.0 153 73.9
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 1.1e-57 227.6 160 70.6
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 1.8e-57 226.9 160 70.0
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 2.4e-57 226.5 160 69.4
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 3.1e-57 226.1 160 70.0
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 3.1e-57 226.1 160 68.1
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 3.1e-57 226.1 150 72.7
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 3.1e-57 226.1 160 71.9
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 3.1e-57 226.1 160 70.0
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 3.1e-57 226.1 160 68.8
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 5.3e-57 225.3 229 55.9
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 6.9e-57 224.9 156 68.6
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 9.0e-57 224.6 157 68.2
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 1.2e-56 224.2 160 68.1
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 1.2e-56 224.2 150 72.0
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 1.2e-56 224.2 160 70.6
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 1.5e-56 223.8 157 71.3
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 1.5e-56 223.8 162 71.0
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 2.0e-56 223.4 157 67.5
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 2.0e-56 223.4 157 70.7
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 2.0e-56 223.4 150 72.0
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 2.0e-56 223.4 158 67.7
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 3.4e-56 222.6 160 70.0
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 4.5e-56 222.2 160 68.1
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 5.9e-56 221.9 154 74.7
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 5.9e-56 221.9 160 67.5
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 7.7e-56 221.5 157 70.1
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 1.0e-55 221.1 161 70.8
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 2.2e-55 219.9 150 71.3
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 2.9e-55 219.5 153 69.9
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 2.9e-55 219.5 166 68.1
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 3.8e-55 219.2 184 62.0
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 5.0e-55 218.8 157 66.9
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 8.5e-55 218.0 157 67.5
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 1.1e-54 217.6 150 70.0
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 1.1e-54 217.6 157 68.8
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 1.4e-54 217.2 161 65.8
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 1.4e-54 217.2 160 66.9
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 1.4e-54 217.2 160 66.9
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 1.4e-54 217.2 160 66.9
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 1.4e-54 217.2 157 67.5
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 3.2e-54 216.1 160 65.6
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 3.2e-54 216.1 153 71.2
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.6e-53 213.8 161 65.8
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 2.1e-53 213.4 149 69.1
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 3.6e-53 212.6 160 66.9
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 4.6e-53 212.2 158 65.2
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 7.9e-53 211.5 152 69.1
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 1.0e-52 211.1 153 68.6
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 1.8e-52 210.3 160 65.6
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 2.3e-52 209.9 160 64.4
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 3.0e-52 209.5 160 65.6
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 3.0e-52 209.5 152 67.1
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 6.7e-52 208.4 161 64.0
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 4.3e-51 205.7 160 65.6
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 1.3e-50 204.1 131 74.8
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 1.3e-47 194.1 155 63.9
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 1.3e-47 194.1 135 70.4
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 1.3e-47 194.1 196 55.1
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 2.9e-47 193.0 156 63.5
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 8.5e-47 191.4 155 63.2
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 2.5e-46 189.9 161 59.6
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 5.5e-46 188.7 157 62.4
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 7.2e-46 188.3 117 76.1
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 1.2e-45 187.6 143 65.0
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 2.7e-45 186.4 168 57.7
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 4.7e-45 185.7 117 75.2
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 3.3e-43 179.5 165 57.6
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.4e-41 174.1 162 58.0
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 1.8e-41 173.7 128 67.2
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 1.3e-39 167.5 128 63.3
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 1.3e-39 167.5 161 57.1
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 8.5e-39 164.9 165 53.3
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 8.0e-37 158.3 153 51.0
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 6.7e-36 155.2 122 65.6
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 5.7e-35 152.1 143 52.4
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 2.4e-33 146.7 114 61.4
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 1.7e-31 140.6 85 78.8
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 1.9e-30 137.1 159 47.8
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 2.2e-26 123.6 154 45.5
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 6.3e-26 122.1 163 46.6
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 3.5e-24 116.3 84 65.5
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 3.5e-24 116.3 137 49.6
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 9.8e-19 98.2 70 65.7
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 2.3e-15 87.0 51 78.4
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 2.3e-15 87.0 66 62.1
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 3.3e-14 83.2 69 62.3
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 8.3e-10 68.6 101 40.6
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 4.3e-06 56.2 145 29.0


User provided reference genes

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