Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold173G39083 Striga asiatica HOM05D005006 ORTHO05D005903 1.9e-62 242.3 117 100.0
Sc22g0005120 Simmondsia chinensis HOM05D005006 ORTHO05D005903 1.1e-12 77.0 110 42.7
TWI81G0332 Tripterygium wilfordii HOM05D005006 ORTHO05D005903 5.2e-12 74.7 102 42.2
CiPaw.11G123200 Carya illinoinensis HOM05D005006 ORTHO05D005903 1.2e-11 73.6 129 38.8
FAN13G1208 Fragaria x ananassa HOM05D005006 ORTHO05D005903 2.0e-11 72.8 114 39.5
FAN18G0263 Fragaria x ananassa HOM05D005006 ORTHO05D005903 2.0e-11 72.8 114 39.5
FAN18G2980 Fragaria x ananassa HOM05D005006 ORTHO05D005903 2.0e-11 72.8 115 40.0
FvH4_5g04150 Fragaria vesca HOM05D005006 ORTHO05D005903 2.6e-11 72.4 114 39.5
Oeu061095.1 Olea europaea HOM05D005006 ORTHO05D005903 2.6e-11 72.4 101 41.6
Cc08_g15850 Coffea canephora HOM05D005006 ORTHO05D005903 3.4e-11 72.0 73 56.2
DCAR_027715 Daucus carota HOM05D005006 ORTHO05D005903 3.4e-11 72.0 116 42.2
FAN04G1712 Fragaria x ananassa HOM05D005006 ORTHO05D005903 4.4e-11 71.6 114 42.1
FAN04G3134 Fragaria x ananassa HOM05D005006 ORTHO05D005903 4.4e-11 71.6 114 42.1
PGSC0003DMG400012296 Solanum tuberosum HOM05D005006 ORTHO05D005903 4.4e-11 71.6 108 43.5
TWI15G0537 Tripterygium wilfordii HOM05D005006 ORTHO05D005903 5.8e-11 71.2 117 39.3
Potri.001G093500 Populus trichocarpa HOM05D005006 ORTHO05D005903 7.5e-11 70.9 113 39.8
Solyc08g082090.1 Solanum lycopersicum HOM05D005006 ORTHO05D005903 9.9e-11 70.5 108 41.7
Sopen08g030380 Solanum pennellii HOM05D005006 ORTHO05D005903 9.9e-11 70.5 108 41.7
Lsat_1_v5_gn_6_11781 Lactuca sativa HOM05D005006 ORTHO05D005903 1.7e-10 69.7 117 38.5
Manes.02G011900 Manihot esculenta HOM05D005006 ORTHO05D005903 1.7e-10 69.7 112 41.1
Rhsim07G0083400 Rhododendron simsii HOM05D005006 ORTHO05D005903 2.2e-10 69.3 107 39.3
Sed0013874 Sechium edule HOM05D005006 ORTHO05D005903 2.2e-10 69.3 54 61.1
ClCG01G001990 Citrullus lanatus HOM05D005006 ORTHO05D005903 2.9e-10 68.9 51 66.7
Dinv37546 Davidia involucrata HOM05D005006 ORTHO05D005903 2.9e-10 68.9 49 69.4
Duzib068G0822 Durio zibethinus HOM05D005006 ORTHO05D005903 2.9e-10 68.9 113 38.9
RcHm_v2.0_Chr7g0195351 Rosa chinensis HOM05D005006 ORTHO05D005903 3.7e-10 68.6 117 41.9
SGA_v2.0_scaffold111G31421 Striga asiatica HOM05D005006 ORTHO05D005903 8.3e-10 67.4 52 61.5
MELO3C005742.2 Cucumis melo HOM05D005006 ORTHO05D005903 1.1e-09 67.0 49 65.3
Nitab4.5_0007099g0020 Nicotiana tabacum HOM05D005006 ORTHO05D005903 1.1e-09 67.0 39 82.1
HanXRQChr07g0191041 Helianthus annuus HOM05D005006 ORTHO05D005903 1.4e-09 66.6 55 56.4
TAR629G3139 Trochodendron aralioides HOM05D005006 ORTHO05D005903 1.4e-09 66.6 86 48.8
MSTRG.13880 Avicennia marina HOM05D005006 ORTHO05D005903 2.4e-09 65.9 109 39.4
CsaV3_5G002120 Cucumis sativus L. HOM05D005006 ORTHO05D005903 2.4e-09 65.9 47 66.0
Duzib084G0720 Durio zibethinus HOM05D005006 ORTHO05D005903 2.4e-09 65.9 115 40.9
Peaxi162Scf00117g00128 Petunia axillaris HOM05D005006 ORTHO05D005903 3.2e-09 65.5 53 64.2
Rhsim02G0241500 Rhododendron simsii HOM05D005006 ORTHO05D005903 3.2e-09 65.5 49 65.3
Thecc.03G294000 Theobroma cacao HOM05D005006 ORTHO05D005903 4.1e-09 65.1 112 35.7
Ciclev10022492m.g Citrus clementina HOM05D005006 ORTHO05D005903 5.4e-09 64.7 52 55.8
Manes.02G012001 Manihot esculenta HOM05D005006 ORTHO05D005903 5.4e-09 64.7 88 37.5
Actinidia01391 Actinidia chinensis HOM05D005006 ORTHO05D005903 9.2e-09 63.9 57 52.6
Nn1g01823 Nelumbo nucifera HOM05D005006 ORTHO05D005903 9.2e-09 63.9 109 39.4
Atru.chr2.764 Acer truncatum HOM05D005006 ORTHO05D005903 1.2e-08 63.5 57 52.6
Atru.chr9.2028 Acer truncatum HOM05D005006 ORTHO05D005903 1.2e-08 63.5 60 55.0
Atru.chr9.2036 Acer truncatum HOM05D005006 ORTHO05D005903 1.2e-08 63.5 60 55.0
Dinv38852 Davidia involucrata HOM05D005006 ORTHO05D005903 1.2e-08 63.5 46 69.6
HanXRQChr03g0085171 Helianthus annuus HOM05D005006 ORTHO05D005903 1.6e-08 63.2 52 51.9
Cfa012825 Carpinus fangiana HOM05D005006 ORTHO05D005903 2.1e-08 62.8 39 71.8
Gohir.D08G132000 Gossypium hirsutum HOM05D005006 ORTHO05D005903 2.1e-08 62.8 117 33.3
Gorai.004G134900 Gossypium raimondii HOM05D005006 ORTHO05D005903 2.1e-08 62.8 117 33.3
Lsat_1_v5_gn_6_85661 Lactuca sativa HOM05D005006 ORTHO05D005903 2.1e-08 62.8 53 52.8
Manes.01G045300 Manihot esculenta HOM05D005006 ORTHO05D005903 2.1e-08 62.8 56 58.9
Peaxi162Scf00074g01119 Petunia axillaris HOM05D005006 ORTHO05D005903 2.1e-08 62.8 39 76.9
Sed0017945 Sechium edule HOM05D005006 ORTHO05D005903 2.1e-08 62.8 49 67.3
ClCG07G014930 Citrullus lanatus HOM05D005006 ORTHO05D005903 2.7e-08 62.4 41 68.3
ClCG10G009270 Citrullus lanatus HOM05D005006 ORTHO05D005903 2.7e-08 62.4 41 68.3
Sabra01G0069400 Salix brachista HOM05D000089 ORTHO05D003403 2.7e-08 62.4 47 61.7
COL.COLO4_21708 Corchorus olitorius HOM05D005006 ORTHO05D005903 3.5e-08 62.0 46 65.2
CSS0022093 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 4.6e-08 61.6 71 47.9
CANSAT21G0143 Cannabis sativa HOM05D005006 ORTHO05D005903 4.6e-08 61.6 58 55.2
Glyma.11G018400 Glycine max HOM05D005006 ORTHO05D005903 4.6e-08 61.6 74 50.0
Hma1.2p1_0359F.1_g135340 Hydrangea macrophylla HOM05D005006 ORTHO05D005903 4.6e-08 61.6 39 74.4
AL2G10550 Arabidopsis lyrata HOM05D005006 ORTHO05D005903 6.0e-08 61.2 124 32.3
ECA233G6185 Erigeron canadensis HOM05D005006 ORTHO05D005903 6.0e-08 61.2 50 54.0
Glyma.01G224600 Glycine max HOM05D005006 ORTHO05D005903 6.0e-08 61.2 71 50.7
ATR0589G111 Amborella trichopoda HOM05D005006 ORTHO05D005903 7.8e-08 60.8 60 53.3
CARHR212760 Cardamine hirsuta HOM05D005006 ORTHO05D005903 7.8e-08 60.8 58 51.7
Eucgr.D01714 Eucalyptus grandis HOM05D005006 ORTHO05D005903 7.8e-08 60.8 47 63.8
Gohir.A08G085100 Gossypium hirsutum HOM05D005006 ORTHO05D005903 7.8e-08 60.8 72 45.8
Sed0010968 Sechium edule HOM05D005006 ORTHO05D005903 7.8e-08 60.8 65 53.8
AL7G47430 Arabidopsis lyrata HOM05D005006 ORTHO05D005903 1.0e-07 60.5 58 51.7
AT5G41810 Arabidopsis thaliana HOM05D005006 ORTHO05D005903 1.0e-07 60.5 58 51.7
MELO3C016304.2 Cucumis melo HOM05D005006 ORTHO05D005903 1.0e-07 60.5 40 70.0
MD06G1103200 Malus domestica HOM05D005006 ORTHO05D005903 1.0e-07 60.5 39 69.2
MD14G1122100 Malus domestica HOM05D005006 ORTHO05D005903 1.0e-07 60.5 39 69.2
THA.LOC104809339 Tarenaya hassleriana HOM05D005006 ORTHO05D005903 1.3e-07 60.1 50 56.0
CSS0014692 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 1.7e-07 59.7 36 75.0
CSS0044305 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 1.7e-07 59.7 36 75.0
Prupe.5G116000 Prunus persica HOM05D005006 ORTHO05D005903 1.7e-07 59.7 62 50.0
PGR031G0908 Punica granatum HOM05D005006 ORTHO05D005903 2.3e-07 59.3 35 71.4
Sp7g00270 Schrenkiella parvula HOM05D005006 ORTHO05D005903 2.3e-07 59.3 48 60.4
BcaC08g44558 Brassica carinata HOM05D005006 ORTHO05D005903 3.0e-07 58.9 52 55.8
C06p20240 Brassica napus HOM05D005006 ORTHO05D005903 3.0e-07 58.9 52 55.8
BolC6t37205H Brassica oleracea HOM05D005006 ORTHO05D005903 3.0e-07 58.9 52 55.8
MBI06_g32753_MAGBIO Magnolia biondii HOM05D005006 ORTHO05D005903 3.0e-07 58.9 73 41.1
Carub.0007s3356 Capsella rubella HOM05D005006 ORTHO05D005903 3.9e-07 58.5 70 51.4
Haze_08651 Corylus avellana HOM05D005006 ORTHO05D005903 3.9e-07 58.5 39 66.7
Haze_08652 Corylus avellana HOM05D005006 ORTHO05D005903 3.9e-07 58.5 39 66.7
CsaV3_4G006460 Cucumis sativus L. HOM05D005006 ORTHO05D005903 3.9e-07 58.5 39 69.2
Cpa.g.sc775.1 Carica papaya HOM05D005006 ORTHO05D005903 5.1e-07 58.2 110 38.2
MBI07_g24340_MAGBIO Magnolia biondii HOM05D005006 ORTHO05D005903 5.1e-07 58.2 69 52.2
BcaB02g07876 Brassica carinata HOM05D005006 ORTHO05D005903 6.6e-07 57.8 48 58.3
BcaC04g22629 Brassica carinata HOM05D005006 ORTHO05D005903 6.6e-07 57.8 121 29.8
A07p20950 Brassica napus HOM05D005006 ORTHO05D005903 6.6e-07 57.8 48 58.3
BraA07t29781Z Brassica rapa HOM05D005006 ORTHO05D005903 6.6e-07 57.8 48 58.3
Thhalv10023644m.g Eutrema salsugineum HOM05D005006 ORTHO05D005903 6.6e-07 57.8 118 30.5
Aqoxy5G04131 Aquilegia oxysepala HOM05D005006 ORTHO05D005903 8.6e-07 57.4 68 50.0
VMungo1215G3249 Vigna mungo HOM05D005266 ORTHO05D006416 8.6e-07 57.4 74 48.6
PGR042G1559 Punica granatum HOM05D005006 ORTHO05D005903 1.1e-06 57.0 35 71.4
A09p14260 Brassica napus HOM05D005006 ORTHO05D005903 1.5e-06 56.6 119 29.4
BraA09t37075Z Brassica rapa HOM05D005006 ORTHO05D005903 1.5e-06 56.6 119 29.4
AT1G64340 Arabidopsis thaliana HOM05D005006 ORTHO05D005903 3.3e-06 55.5 49 53.1
C09p17190 Brassica napus HOM05D005006 ORTHO05D005903 3.3e-06 55.5 117 29.9
BolC9t54617H Brassica oleracea HOM05D005006 ORTHO05D005903 3.3e-06 55.5 117 29.9
ECA240G3705 Erigeron canadensis HOM05D005006 ORTHO05D005903 4.3e-06 55.1 39 64.1
QL02p031286 Quercus lobata HOM05D005006 ORTHO05D005903 4.3e-06 55.1 36 63.9
Sp2g00420 Schrenkiella parvula HOM05D005006 ORTHO05D005903 4.3e-06 55.1 47 53.2
Prupe.2G184300 Prunus persica HOM05D007041 ORTHO05D008036 5.6e-06 54.7 110 30.9
LjContig00312_ERROPOS870357g0014674 Lotus japonicus HOM05D005006 ORTHO05D005903 7.3e-06 54.3 88 44.3
Psat0s4474g0040 Pisum sativum HOM05D005006 ORTHO05D005903 7.3e-06 54.3 48 56.2
Rhsim02G0241700 Rhododendron simsii HOM05D000089 ORTHO05D003403 7.3e-06 54.3 49 57.1
Carub.0002s0046 Capsella rubella HOM05D005006 ORTHO05D005903 9.5e-06 53.9 38 68.4
Gohir.A11G024100 Gossypium hirsutum HOM05D005006 ORTHO05D005903 9.5e-06 53.9 75 42.7


User provided reference genes

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