Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 9.7e-95 350.1 176 100.0
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 1.9e-50 203.0 175 61.7
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.7e-46 189.9 176 60.2
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 2.4e-45 186.0 174 62.1
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 5.4e-45 184.9 173 56.6
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 4.6e-44 181.8 180 52.2
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 1.5e-42 176.8 184 57.1
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 2.5e-42 176.0 175 53.1
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 4.3e-42 175.3 173 56.1
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 4.3e-42 175.3 117 71.8
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 6.2e-41 171.4 176 54.0
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.4e-40 170.2 126 67.5
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.4e-40 170.2 126 67.5
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 2.3e-40 169.5 111 73.0
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 3.1e-40 169.1 114 71.1
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 4.0e-40 168.7 125 65.6
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 4.0e-40 168.7 118 66.1
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 4.0e-40 168.7 118 66.1
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 6.8e-40 167.9 176 52.8
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 6.8e-40 167.9 125 64.8
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 1.2e-39 167.2 118 65.3
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 1.2e-39 167.2 108 68.5
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 1.2e-39 167.2 104 76.0
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 2.0e-39 166.4 118 66.1
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 2.0e-39 166.4 118 70.3
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 2.0e-39 166.4 118 70.3
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 2.6e-39 166.0 109 70.6
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 2.6e-39 166.0 107 73.8
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 2.6e-39 166.0 179 50.8
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 2.6e-39 166.0 107 73.8
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 3.4e-39 165.6 122 67.2
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 4.4e-39 165.2 118 65.3
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 4.4e-39 165.2 153 56.2
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 5.8e-39 164.9 117 68.4
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 5.8e-39 164.9 117 68.4
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 7.5e-39 164.5 177 54.8
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 7.5e-39 164.5 116 69.8
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 7.5e-39 164.5 179 50.3
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 9.9e-39 164.1 130 63.1
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 1.3e-38 163.7 118 65.3
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 1.3e-38 163.7 101 77.2
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 1.7e-38 163.3 117 66.7
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 2.2e-38 162.9 125 62.4
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 2.9e-38 162.5 181 53.0
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 4.9e-38 161.8 113 71.7
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 4.9e-38 161.8 130 62.3
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 4.9e-38 161.8 113 65.5
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 6.4e-38 161.4 134 61.9
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 6.4e-38 161.4 169 52.1
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 8.3e-38 161.0 128 63.3
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 1.1e-37 160.6 180 52.2
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 1.1e-37 160.6 107 68.2
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 1.1e-37 160.6 115 68.7
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 1.1e-37 160.6 154 54.5
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 1.1e-37 160.6 113 64.6
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 1.1e-37 160.6 107 72.0
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 1.4e-37 160.2 152 58.6
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 1.9e-37 159.8 104 71.2
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 2.4e-37 159.5 113 65.5
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 2.4e-37 159.5 113 65.5
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 4.1e-37 158.7 107 69.2
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 5.4e-37 158.3 103 74.8
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 7.1e-37 157.9 113 67.3
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 9.2e-37 157.5 154 54.5
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 1.2e-36 157.1 106 71.7
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 1.6e-36 156.8 114 67.5
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 1.6e-36 156.8 113 66.4
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.6e-36 156.8 106 70.8
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.6e-36 156.8 106 70.8
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 2.1e-36 156.4 132 61.4
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 2.1e-36 156.4 125 63.2
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 2.7e-36 156.0 124 62.9
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 2.7e-36 156.0 114 66.7
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 2.7e-36 156.0 106 68.9
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 4.6e-36 155.2 182 51.6
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 4.6e-36 155.2 113 66.4
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 6.0e-36 154.8 106 67.9
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 1.3e-35 153.7 107 66.4
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 1.3e-35 153.7 113 62.8
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 1.7e-35 153.3 113 67.3
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 1.7e-35 153.3 98 73.5
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 5.1e-35 151.8 107 69.2
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 5.1e-35 151.8 128 64.1
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 6.6e-35 151.4 125 63.2
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 1.9e-34 149.8 98 73.5
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 2.5e-34 149.4 106 69.8
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 2.5e-34 149.4 179 51.4
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 3.3e-34 149.1 85 81.2
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 3.3e-34 149.1 101 71.3
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 3.3e-34 149.1 101 72.3
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 1.2e-33 147.1 104 67.3
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 6.2e-33 144.8 182 48.4
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 6.2e-33 144.8 182 48.4
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 6.2e-33 144.8 182 48.4
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 1.1e-32 144.1 85 81.2
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 3.1e-32 142.5 106 62.3
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 8.9e-32 141.0 84 78.6
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 1.5e-31 140.2 87 75.9
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 2.0e-31 139.8 103 64.1
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.7e-27 126.7 123 52.0
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.7e-27 126.7 123 52.0
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 2.3e-27 126.3 114 53.5
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 4.3e-26 122.1 120 49.2
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 2.0e-23 113.2 86 60.5
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 3.3e-10 69.3 37 75.7


User provided reference genes

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