Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold172G39038 Striga asiatica HOM05D005701 ORTHO05D007058 2.7e-146 521.9 253 100.0
Migut.N02175 Erythranthe guttata HOM05D005701 ORTHO05D007058 1.6e-66 256.9 164 75.0
Migut.N02139 Erythranthe guttata HOM05D005701 ORTHO05D007058 2.7e-66 256.1 164 75.6
SalBow6G2366 Salvia bowleyana HOM05D005701 ORTHO05D007058 1.5e-64 250.4 164 73.2
MSTRG.17433 Avicennia marina HOM05D005701 ORTHO05D007058 2.8e-63 246.1 160 73.8
Oeu006228.1 Olea europaea HOM05D005701 ORTHO05D007058 1.1e-62 244.2 160 75.0
unitig_8.g3319 Utricularia gibba HOM05D005701 ORTHO05D007058 1.4e-62 243.8 164 68.3
Actinidia24310 Actinidia chinensis HOM05D005701 ORTHO05D007058 5.3e-62 241.9 155 75.5
PGR119G1915 Punica granatum HOM05D005701 ORTHO05D007058 5.3e-62 241.9 159 72.3
Cfa006081 Carpinus fangiana HOM05D005701 ORTHO05D007058 2.0e-61 240.0 157 72.6
GSVIVG01011062001 Vitis vinifera HOM05D005701 ORTHO05D007058 4.5e-61 238.8 157 71.3
TWI59G0853 Tripterygium wilfordii HOM05D005701 ORTHO05D007058 1.0e-60 237.7 164 67.7
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 2.2e-60 236.5 162 71.6
Potri.002G212400 Populus trichocarpa HOM05D005701 ORTHO05D007058 3.8e-60 235.7 159 71.1
CSS0017429 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 5.0e-60 235.3 155 72.9
CiPaw.08G102100 Carya illinoinensis HOM05D005701 ORTHO05D007058 5.0e-60 235.3 161 70.8
Psat6g169920 Pisum sativum HOM05D005701 ORTHO05D007058 5.0e-60 235.3 157 68.8
vmacro02538 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 6.5e-60 235.0 155 71.6
Glyma.02G150100 Glycine max HOM05D005701 ORTHO05D007058 1.1e-59 234.2 126 81.7
TPR.G26671 Trifolium pratense HOM05D005701 ORTHO05D007058 1.1e-59 234.2 156 69.9
Ca_10397_v3 Cicer arietinum L. HOM05D005701 ORTHO05D007058 1.5e-59 233.8 132 77.3
Lalb_Chr06g0163181 Lupinus albus HOM05D005701 ORTHO05D007058 2.5e-59 233.0 155 71.6
Haze_04768 Corylus avellana HOM05D005701 ORTHO05D007058 5.5e-59 231.9 179 65.9
QL02p002445 Quercus lobata HOM05D005701 ORTHO05D007058 5.5e-59 231.9 153 71.2
Nitab4.5_0002093g0100 Nicotiana tabacum HOM05D005701 ORTHO05D007058 7.2e-59 231.5 163 68.7
Cc01_g05150 Coffea canephora HOM05D005701 ORTHO05D007058 9.4e-59 231.1 126 80.2
Dinv11265 Davidia involucrata HOM05D005701 ORTHO05D007058 1.2e-58 230.7 164 67.1
Ciclev10022400m.g Citrus clementina HOM05D005701 ORTHO05D007058 2.1e-58 229.9 162 68.5
Medtr1g089810 Medicago truncatula HOM05D005701 ORTHO05D007058 2.1e-58 229.9 150 70.0
Lj5g0014836 Lotus japonicus HOM05D005701 ORTHO05D007058 2.7e-58 229.6 159 68.6
Manes.01G211300 Manihot esculenta HOM05D005701 ORTHO05D007058 2.7e-58 229.6 157 70.1
Nn1g02106 Nelumbo nucifera HOM05D005701 ORTHO05D007058 2.7e-58 229.6 158 66.5
VMungo0720G2830 Vigna mungo HOM05D005701 ORTHO05D007058 2.7e-58 229.6 162 67.9
PGSC0003DMG401020044 Solanum tuberosum HOM05D005701 ORTHO05D007058 3.6e-58 229.2 156 69.2
Peaxi162Scf00783g00418 Petunia axillaris HOM05D005701 ORTHO05D007058 6.1e-58 228.4 126 79.4
CAN.G1682.11 Capsicum annuum HOM05D005701 ORTHO05D007058 8.0e-58 228.0 126 79.4
PSO302G0130 Papaver somniferum HOM05D005701 ORTHO05D007058 1.0e-57 227.6 158 65.8
Phvul.007G168600 Phaseolus vulgaris HOM05D005701 ORTHO05D007058 1.0e-57 227.6 161 68.3
Eucgr.H01544 Eucalyptus grandis HOM05D005701 ORTHO05D007058 1.4e-57 227.3 147 72.1
HanXRQChr14g0430981 Helianthus annuus HOM05D005701 ORTHO05D007058 1.4e-57 227.3 126 79.4
Lsat_1_v5_gn_5_187740 Lactuca sativa HOM05D005701 ORTHO05D007058 2.3e-57 226.5 156 67.3
Sed0003723 Sechium edule HOM05D005701 ORTHO05D007058 6.8e-57 224.9 159 68.6
THA.LOC104826003 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 6.8e-57 224.9 126 77.8
Gorai.008G006100 Gossypium raimondii HOM05D005701 ORTHO05D007058 1.2e-56 224.2 168 65.5
THA.LOC104801212 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 1.2e-56 224.2 126 77.8
TAR365G0921 Trochodendron aralioides HOM05D005701 ORTHO05D007058 1.2e-56 224.2 126 77.0
PSO170G3928 Papaver somniferum HOM05D005701 ORTHO05D007058 2.0e-56 223.4 158 64.6
Solyc06g084390.3 Solanum lycopersicum HOM05D005701 ORTHO05D007058 2.0e-56 223.4 156 66.7
Sopen06g035780 Solanum pennellii HOM05D005701 ORTHO05D007058 2.0e-56 223.4 156 66.7
MELO3C015871.2 Cucumis melo HOM05D005701 ORTHO05D007058 3.4e-56 222.6 159 67.9
Duzib138G1703 Durio zibethinus HOM05D005701 ORTHO05D007058 3.4e-56 222.6 160 66.9
Manes.05G072000 Manihot esculenta HOM05D005701 ORTHO05D007058 4.4e-56 222.2 157 68.2
ClCG09G006770 Citrullus lanatus HOM05D005701 ORTHO05D007058 5.7e-56 221.9 159 66.0
CsaV3_7G028500 Cucumis sativus L. HOM05D005701 ORTHO05D007058 5.7e-56 221.9 159 68.6
Atru.chr5.1332 Acer truncatum HOM05D005701 ORTHO05D007058 9.8e-56 221.1 161 65.8
SGA_v2.0_scaffold1G00437 Striga asiatica HOM05D005701 ORTHO05D007058 9.8e-56 221.1 162 65.4
Nitab4.5_0010603g0020 Nicotiana tabacum HOM05D005701 ORTHO05D007058 1.3e-55 220.7 126 77.0
Thecc.01G285600 Theobroma cacao HOM05D005701 ORTHO05D007058 1.3e-55 220.7 157 67.5
Prupe.8G247700 Prunus persica HOM05D005701 ORTHO05D007058 1.7e-55 220.3 157 69.4
Migut.D00251 Erythranthe guttata HOM05D005701 ORTHO05D007058 2.2e-55 219.9 163 64.4
Gohir.A12G006700 Gossypium hirsutum HOM05D005701 ORTHO05D007058 2.2e-55 219.9 160 66.9
MD03G1271500 Malus domestica HOM05D005701 ORTHO05D007058 3.7e-55 219.2 157 68.2
CANSAT25G0672 Cannabis sativa HOM05D005701 ORTHO05D007058 4.8e-55 218.8 163 65.6
MD11G1292100 Malus domestica HOM05D005701 ORTHO05D007058 8.3e-55 218.0 157 68.8
Sc24g0004070 Simmondsia chinensis HOM05D005701 ORTHO05D007058 1.4e-54 217.2 163 65.0
FAN20G1753 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.8e-54 216.9 158 67.7
FAN27G2557 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.8e-54 216.9 158 67.7
FAN15G1986 Fragaria x ananassa HOM05D005701 ORTHO05D007058 2.4e-54 216.5 156 67.3
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla HOM05D005701 ORTHO05D007058 4.1e-54 215.7 126 77.8
Aqoxy2G03192 Aquilegia oxysepala HOM05D005701 ORTHO05D007058 5.4e-54 215.3 158 63.9
RcHm_v2.0_Chr6g0291961 Rosa chinensis HOM05D005701 ORTHO05D007058 5.4e-54 215.3 157 66.9
ECA248G0764 Erigeron canadensis HOM05D005701 ORTHO05D007058 9.1e-54 214.5 129 72.1
AT4G02980 Arabidopsis thaliana HOM05D005701 ORTHO05D007058 2.0e-53 213.4 157 66.2
Carub.0006s3407 Capsella rubella HOM05D005701 ORTHO05D007058 5.9e-53 211.8 166 62.7
Thhalv10028980m.g Eutrema salsugineum HOM05D005701 ORTHO05D007058 1.3e-52 210.7 166 62.0
FAN24G1361 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.7e-52 210.3 158 65.8
A09p02300 Brassica napus HOM05D005701 ORTHO05D007058 2.3e-52 209.9 157 65.6
BraA09t35879Z Brassica rapa HOM05D005701 ORTHO05D007058 2.3e-52 209.9 157 65.6
AL6G49950 Arabidopsis lyrata HOM05D005701 ORTHO05D007058 2.9e-52 209.5 157 65.0
Aa31LG5G2530 Aethionema arabicum HOM05D005701 ORTHO05D007058 6.5e-52 208.4 126 72.2
Sp6g03020 Schrenkiella parvula HOM05D005701 ORTHO05D007058 8.6e-52 208.0 157 66.2
EL10Ac7g17192 Beta vulgaris HOM05D005701 ORTHO05D007058 1.1e-51 207.6 164 60.4
CARHR251350 Cardamine hirsuta HOM05D005701 ORTHO05D007058 3.3e-51 206.1 126 74.6
BcaB01g02494 Brassica carinata HOM05D005701 ORTHO05D007058 5.5e-51 205.3 157 63.1
HPP92_010620 Vanilla planifolia HOM05D005701 ORTHO05D007058 5.5e-51 205.3 124 75.0
Lj2A1180T63 Lonicera japonica HOM05D005701 ORTHO05D007058 7.2e-51 204.9 126 75.4
BraA03t12248Z Brassica rapa HOM05D005701 ORTHO05D007058 1.6e-50 203.8 157 63.1
A03p30690 Brassica napus HOM05D005701 ORTHO05D007058 2.8e-50 203.0 157 63.1
BolC3t16031H Brassica oleracea HOM05D005701 ORTHO05D007058 2.8e-50 203.0 157 63.1
C03p37390 Brassica napus HOM05D005701 ORTHO05D007058 3.6e-50 202.6 157 63.1
BcaC01g06714 Brassica carinata HOM05D005701 ORTHO05D007058 4.7e-50 202.2 157 63.1
SalBow3G3506 Salvia bowleyana HOM05D005701 ORTHO05D007058 4.7e-50 202.2 126 72.2
Ah.08g212880 Amaranthus hybridus HOM05D005701 ORTHO05D007058 6.1e-50 201.8 165 62.4
CDE08G1024 Ceratophyllum demersum HOM05D005701 ORTHO05D007058 6.1e-50 201.8 124 73.4
ECA248G1579 Erigeron canadensis HOM05D005701 ORTHO05D007058 6.1e-50 201.8 173 56.6
Zm00001eb410800 Zea mays HOM05D005701 ORTHO05D007058 6.1e-50 201.8 153 64.1
Zm00001eb410760 Zea mays HOM05D005701 ORTHO05D007058 1.0e-49 201.1 153 64.1
Os12g0529400 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 1.8e-49 200.3 124 71.8
C09p02410 Brassica napus HOM05D005701 ORTHO05D007058 3.0e-49 199.5 158 62.7
Hund06566 Selenicereus undatus HOM05D005701 ORTHO05D007058 4.0e-49 199.1 156 61.5
BolC9t53172H Brassica oleracea HOM05D005701 ORTHO05D007058 5.2e-49 198.7 158 62.7
Cc01_g03720 Coffea canephora HOM05D005701 ORTHO05D007058 1.5e-48 197.2 104 82.7
Thecc.01G285700 Theobroma cacao HOM05D005701 ORTHO05D007058 5.7e-48 195.3 125 68.8
Oeu047892.2 Olea europaea HOM05D005701 ORTHO05D007058 2.8e-47 193.0 243 45.3
MSTRG.12575 Avicennia marina HOM05D005701 ORTHO05D007058 1.1e-46 191.0 167 54.5
Zm00001eb137840 Zea mays HOM05D005701 ORTHO05D007058 1.8e-46 190.3 155 58.7
TPR.G13316 Trifolium pratense HOM05D005701 ORTHO05D007058 3.1e-46 189.5 152 59.2
Zm00001eb440220 Zea mays HOM05D005701 ORTHO05D007058 2.9e-44 183.0 142 62.7
AUR62036778 Chenopodium quinoa HOM05D005701 ORTHO05D007058 1.5e-43 180.6 226 46.5
vmacro02539 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 1.5e-43 180.6 104 77.9
BcaB01g01993 Brassica carinata HOM05D005701 ORTHO05D007058 3.3e-43 179.5 108 76.9
Cpa.g.sc9.126 Carica papaya HOM05D005701 ORTHO05D007058 3.3e-43 179.5 138 60.1
FvH4_2g24150 Fragaria vesca HOM05D005701 ORTHO05D007058 5.6e-43 178.7 136 64.7
Pp3c4_12660 Physcomitrium patens HOM05D005701 ORTHO05D007058 1.2e-42 177.6 123 62.6
Pp3c4_12750 Physcomitrium patens HOM05D005701 ORTHO05D007058 1.2e-42 177.6 123 62.6
CAN.G996.16 Capsicum annuum HOM05D005701 ORTHO05D007058 8.0e-42 174.9 139 58.3
MBI19_g33449_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 8.0e-42 174.9 104 73.1
MBI19_g39288_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 2.3e-41 173.3 103 72.8
QL02p081958 Quercus lobata HOM05D005701 ORTHO05D007058 1.7e-39 167.2 109 71.6
SMO164G0245 Selaginella moellendorffii HOM05D005701 ORTHO05D007058 7.0e-38 161.8 129 59.7
ATR0626G241 Amborella trichopoda HOM05D005701 ORTHO05D007058 1.6e-37 160.6 105 67.6
Rhsim13G0021400 Rhododendron simsii HOM05D005701 ORTHO05D007058 3.5e-37 159.5 115 66.1
Zm00001eb410780 Zea mays HOM05D005701 ORTHO05D007058 3.5e-37 159.5 146 56.2
Gohir.D12G006100 Gossypium hirsutum HOM05D005701 ORTHO05D007058 1.5e-35 154.1 124 63.7
AUR62033690 Chenopodium quinoa HOM05D005701 ORTHO05D007058 4.3e-35 152.5 91 73.6
Cc00_g05320 Coffea canephora HOM05D005701 ORTHO05D007058 2.3e-33 146.7 107 61.7
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis HOM05D005701 ORTHO05D007058 9.8e-32 141.4 162 46.3
CBR_g38020 Chara braunii HOM05D005701 ORTHO05D007058 1.2e-24 117.9 93 57.0
Rhsim13G0021300 Rhododendron simsii HOM05D005701 ORTHO05D007058 4.6e-21 105.9 188 35.6
Lsat_1_v5_gn_4_17561 Lactuca sativa HOM05D005701 ORTHO05D007058 1.3e-20 104.4 96 55.2
Os12g0529300 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 1.7e-15 87.4 48 75.0
Ah.04g164000 Amaranthus hybridus HOM05D005701 ORTHO05D007058 3.5e-13 79.7 55 60.0
Rhsim11G0018300 Rhododendron simsii HOM05D003327 ORTHO05D004535 1.3e-12 77.8 44 79.5
CSS0004068 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 3.4e-08 63.2 64 53.1
C09p02610 Brassica napus HOM05D005701 ORTHO05D007058 2.2e-07 60.5 48 62.5


User provided reference genes

Program Settings