Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold172G39028 Striga asiatica HOM05D007520 ORTHO05D009417 4.1e-128 461.5 239 100.0
Migut.L00619 Erythranthe guttata HOM05D007520 ORTHO05D009417 1.5e-90 336.7 231 74.9
Duzib268G1867 Durio zibethinus HOM05D007520 ORTHO05D009417 3.2e-64 249.2 225 58.7
Psat6g100600 Pisum sativum HOM05D007520 ORTHO05D009417 4.1e-64 248.8 223 57.8
Sed0012329 Sechium edule HOM05D007520 ORTHO05D009417 9.2e-64 247.7 232 55.2
TPR.G35527 Trifolium pratense HOM05D007520 ORTHO05D009417 9.2e-64 247.7 223 57.0
TWI53G0076 Tripterygium wilfordii HOM05D007520 ORTHO05D009417 2.0e-63 246.5 223 58.7
Hma1.2p1_0095F.1_g047520 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 2.7e-63 246.1 199 64.8
Sopen04g032100 Solanum pennellii HOM05D007520 ORTHO05D009417 3.5e-63 245.7 232 55.2
CAN.G1812.4 Capsicum annuum HOM05D007520 ORTHO05D009417 4.6e-63 245.4 232 57.3
Prupe.1G338000 Prunus persica HOM05D007520 ORTHO05D009417 4.6e-63 245.4 226 58.8
CANSAT78G2519 Cannabis sativa HOM05D007520 ORTHO05D009417 1.3e-62 243.8 226 56.2
ECA246G0416 Erigeron canadensis HOM05D007520 ORTHO05D009417 2.3e-62 243.0 221 55.2
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 2.3e-62 243.0 232 55.2
Medtr1g038820 Medicago truncatula HOM05D007520 ORTHO05D009417 3.9e-62 242.3 223 55.2
Manes.17G089333 Manihot esculenta HOM05D007520 ORTHO05D009417 5.0e-62 241.9 226 56.6
MELO3C020056.2 Cucumis melo HOM05D007520 ORTHO05D009417 6.6e-62 241.5 236 53.4
Gorai.008G169800 Gossypium raimondii HOM05D007520 ORTHO05D009417 6.6e-62 241.5 225 57.3
CsaV3_5G012990 Cucumis sativus L. HOM05D007520 ORTHO05D009417 1.1e-61 240.7 236 52.5
Nitab4.5_0004339g0060 Nicotiana tabacum HOM05D007520 ORTHO05D009417 5.6e-61 238.4 231 56.3
Lj2g0009613 Lotus japonicus HOM05D007520 ORTHO05D009417 7.3e-61 238.0 223 57.0
MD13G1015700 Malus domestica HOM05D007520 ORTHO05D009417 7.3e-61 238.0 226 58.0
TAR374G0082 Trochodendron aralioides HOM05D000504 ORTHO05D000403 1.6e-60 236.9 213 59.6
Actinidia11793 Actinidia chinensis HOM05D007520 ORTHO05D009417 2.1e-60 236.5 199 63.8
Solyc04g078500.1 Solanum lycopersicum HOM05D007520 ORTHO05D009417 2.8e-60 236.1 232 54.3
PGR042G3173 Punica granatum HOM05D007520 ORTHO05D009417 8.1e-60 234.6 222 53.6
Nn4g24547 Nelumbo nucifera HOM05D007520 ORTHO05D009417 2.3e-59 233.0 228 55.3
Nitab4.5_0010118g0020 Nicotiana tabacum HOM05D007520 ORTHO05D009417 2.3e-59 233.0 235 54.9
Ciclev10016556m.g Citrus clementina HOM05D007520 ORTHO05D009417 6.8e-59 231.5 214 57.0
COL.COLO4_27582 Corchorus olitorius HOM05D007520 ORTHO05D009417 3.4e-58 229.2 201 61.2
QL03p039135 Quercus lobata HOM05D007520 ORTHO05D009417 3.4e-58 229.2 198 62.1
RcHm_v2.0_Chr4g0433681 Rosa chinensis HOM05D007520 ORTHO05D009417 3.4e-58 229.2 224 54.9
FvH4_4g26110 Fragaria vesca HOM05D007520 ORTHO05D009417 3.7e-57 225.7 223 53.8
Thhalv10005705m.g Eutrema salsugineum HOM05D007520 ORTHO05D009417 8.3e-57 224.6 222 54.1
Aqoxy5G01264 Aquilegia oxysepala HOM05D007520 ORTHO05D009417 1.4e-56 223.8 225 52.0
THA.LOC104824117 Tarenaya hassleriana HOM05D007520 ORTHO05D009417 1.4e-56 223.8 222 52.7
PSO017G5472 Papaver somniferum HOM05D007520 ORTHO05D009417 3.2e-56 222.6 230 52.6
CiPaw.06G058600 Carya illinoinensis HOM05D007520 ORTHO05D009417 6.0e-55 218.4 223 53.4
AT2G01905 Arabidopsis thaliana HOM05D007520 ORTHO05D009417 1.3e-54 217.2 222 51.8
PSO478G1043 Papaver somniferum HOM05D007520 ORTHO05D009417 3.9e-54 215.7 235 51.5
Sp2g13330 Schrenkiella parvula HOM05D007520 ORTHO05D009417 3.9e-54 215.7 222 52.3
AL5G11020 Arabidopsis lyrata HOM05D007520 ORTHO05D009417 1.1e-53 214.2 222 51.8
CARHR144480 Cardamine hirsuta HOM05D007520 ORTHO05D009417 1.1e-53 214.2 222 51.4
Phvul.003G001900 Phaseolus vulgaris HOM05D007520 ORTHO05D009417 1.1e-53 214.2 223 50.7
C07p32740 Brassica napus HOM05D007520 ORTHO05D009417 7.3e-53 211.5 222 50.5
BolC7t43791H Brassica oleracea HOM05D007520 ORTHO05D009417 9.5e-53 211.1 224 50.4
HanXRQChr12g0379401 Helianthus annuus HOM05D007520 ORTHO05D009417 2.1e-52 209.9 207 52.2
BraA06t27270Z Brassica rapa HOM05D007520 ORTHO05D009417 1.1e-51 207.6 224 50.4
A06p43940 Brassica napus HOM05D007520 ORTHO05D009417 1.4e-51 207.2 222 50.0
BcaC06g31264 Brassica carinata HOM05D007520 ORTHO05D009417 5.8e-50 201.8 198 54.0
arahy.Tifrunner.gnm1.ann1.RL07R4 Arachis hypogaea HOM05D007520 ORTHO05D009417 9.9e-50 201.1 203 54.2
VMungo0251G1805 Vigna mungo HOM05D007520 ORTHO05D009417 9.9e-50 201.1 224 49.6
Ah.11g041100 Amaranthus hybridus HOM05D007520 ORTHO05D009417 2.9e-49 199.5 232 47.4
Sc15g0004470 Simmondsia chinensis HOM05D007520 ORTHO05D009417 3.8e-49 199.1 226 48.2
Thecc.02G303900 Theobroma cacao HOM05D007520 ORTHO05D009417 1.1e-48 197.6 168 61.3
EL10Ac1g01972 Beta vulgaris HOM05D007520 ORTHO05D009417 1.6e-47 193.7 228 46.5
Atru.chr11.1007 Acer truncatum HOM05D007520 ORTHO05D009417 4.6e-47 192.2 182 57.1
Aa31LG2G8010 Aethionema arabicum HOM05D007520 ORTHO05D009417 1.5e-45 187.2 226 48.2
Lalb_Chr10g0094861 Lupinus albus HOM05D007520 ORTHO05D009417 1.5e-45 187.2 184 54.3
Zm00001eb010100 Zea mays HOM05D007520 ORTHO05D009417 2.8e-44 183.0 215 45.6
Lsat_1_v5_gn_5_170921 Lactuca sativa HOM05D007520 ORTHO05D009417 5.2e-43 178.7 203 49.3
FAN12G3032 Fragaria x ananassa HOM05D007520 ORTHO05D009417 2.0e-42 176.8 180 53.3
FAN12G3090 Fragaria x ananassa HOM05D007520 ORTHO05D009417 2.0e-42 176.8 180 53.3
MSTRG.8107 Avicennia marina HOM05D007520 ORTHO05D009417 9.3e-40 167.9 121 67.8
SalBow4G2630 Salvia bowleyana HOM05D007520 ORTHO05D009417 9.3e-40 167.9 128 66.4
FAN17G2852 Fragaria x ananassa HOM05D007520 ORTHO05D009417 6.0e-39 165.2 207 46.9
Atru.BG.295.p Acer truncatum HOM05D007520 ORTHO05D009417 8.7e-38 161.4 131 65.6
Dinv08902 Davidia involucrata HOM05D007520 ORTHO05D009417 8.7e-38 161.4 131 61.1
SalBow3G0394 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.9e-37 160.2 115 70.4
Glyma.14G224300 Glycine max HOM05D007520 ORTHO05D009417 4.3e-37 159.1 157 54.8
AUR62036879 Chenopodium quinoa HOM05D007520 ORTHO05D009417 4.8e-36 155.6 163 48.5
Cc11_g05730 Coffea canephora HOM05D007520 ORTHO05D009417 1.8e-35 153.7 110 67.3
Gohir.D12G157000 Gossypium hirsutum HOM05D007520 ORTHO05D009417 9.9e-34 147.9 223 39.0
Gohir.A12G153900 Gossypium hirsutum HOM05D007520 ORTHO05D009417 2.2e-33 146.7 223 38.6
FAN22G1570 Fragaria x ananassa HOM05D000296 ORTHO05D000175 6.0e-31 138.7 144 52.8
SalBow6G7185 Salvia bowleyana HOM05D007520 ORTHO05D009417 8.7e-30 134.8 101 67.3
Hma1.2p1_0095F.1_g047530 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 2.5e-29 133.3 228 42.5
GSVIVG01011595001 Vitis vinifera HOM05D007520 ORTHO05D009417 2.5e-29 133.3 112 61.6
GSVIVG01011596001 Vitis vinifera HOM05D007520 ORTHO05D009417 1.3e-28 131.0 106 59.4
CSS0024703 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 2.8e-28 129.8 135 54.8
PGSC0003DMG400013121 Solanum tuberosum HOM05D007520 ORTHO05D009417 3.7e-28 129.4 120 55.8
CSS0021820 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 4.8e-28 129.0 120 55.8
CSS0032687 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 4.8e-28 129.0 120 55.8
Rhsim09G0085600 Rhododendron simsii HOM05D007520 ORTHO05D009417 1.5e-26 124.0 169 48.5
SalBow2G3493 Salvia bowleyana HOM05D007520 ORTHO05D009417 3.8e-25 119.4 87 69.0
Carub.0005s0090 Capsella rubella HOM05D007520 ORTHO05D009417 6.4e-25 118.6 110 56.4
CSS0003025 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 2.1e-23 113.6 135 48.9
DCAR_002655 Daucus carota HOM05D007520 ORTHO05D009417 2.1e-23 113.6 127 52.8
Lj3A859T72 Lonicera japonica HOM05D007520 ORTHO05D009417 3.5e-23 112.8 130 53.1
HPP92_016407 Vanilla planifolia HOM05D007520 ORTHO05D009417 1.3e-22 110.9 118 48.3
ClCG11G001000 Citrullus lanatus HOM05D007520 ORTHO05D009417 8.7e-22 108.2 124 50.0
Carub.0005s0089 Capsella rubella HOM05D007520 ORTHO05D009417 1.5e-21 107.5 106 51.9
Mapoly0059s0009 Marchantia polymorpha HOM05D007520 ORTHO05D009417 4.8e-20 102.4 224 26.3
Haze_10814 Corylus avellana HOM05D007520 ORTHO05D009417 1.2e-18 97.8 73 61.6
Dinv08901 Davidia involucrata HOM05D007520 ORTHO05D009417 7.6e-18 95.1 71 64.8
CDE06G1244 Ceratophyllum demersum HOM05D007520 ORTHO05D009417 3.8e-17 92.8 102 46.1
CSS0008274 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 4.9e-17 92.4 61 70.5
Pp3c10_19450 Physcomitrium patens HOM05D007520 ORTHO05D009417 1.2e-15 87.8 191 29.3
Eucgr.B02652 Eucalyptus grandis HOM05D007520 ORTHO05D009417 5.1e-14 82.4 74 55.4
AUR62026615 Chenopodium quinoa HOM05D007520 ORTHO05D009417 8.7e-14 81.6 101 41.6
HPP92_016406 Vanilla planifolia HOM05D007520 ORTHO05D009417 5.7e-13 79.0 59 64.4
AUR62032185 Chenopodium quinoa HOM05D007520 ORTHO05D009417 4.8e-12 75.9 89 42.7


User provided reference genes

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