Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold172G39021 Striga asiatica HOM05D004562 ORTHO05D005435 0.0e+00 1535.8 795 100.0
Migut.D01318 Erythranthe guttata HOM05D004562 ORTHO05D005435 1.8e-305 1052.4 803 71.0
MSTRG.9309 Avicennia marina HOM05D004562 ORTHO05D005435 7.8e-301 1036.9 817 69.6
SalBow1G2489 Salvia bowleyana HOM05D004562 ORTHO05D005435 4.3e-259 898.3 715 68.1
Oeu026264.3 Olea europaea HOM05D004562 ORTHO05D005435 1.7e-247 859.8 803 60.6
Dinv02642 Davidia involucrata HOM05D004562 ORTHO05D005435 8.7e-244 847.4 799 59.9
vmacro16407 Vaccinium macrocarpon HOM05D004562 ORTHO05D005435 8.2e-234 814.3 814 57.1
Cc04_g06100 Coffea canephora HOM05D004562 ORTHO05D005435 1.5e-227 793.5 798 57.3
Prupe.5G234800 Prunus persica HOM05D004562 ORTHO05D005435 1.7e-226 790.0 806 57.1
QL10p030682 Quercus lobata HOM05D004562 ORTHO05D005435 6.3e-226 788.1 800 55.9
Gorai.008G290800 Gossypium raimondii HOM05D004562 ORTHO05D005435 8.2e-226 787.7 788 57.4
Rhsim12G0137700 Rhododendron simsii HOM05D004562 ORTHO05D005435 1.4e-225 786.9 792 57.2
Gohir.D12G270500 Gossypium hirsutum HOM05D004562 ORTHO05D005435 4.1e-225 785.4 788 57.5
CANSAT80G2549 Cannabis sativa HOM05D004562 ORTHO05D005435 7.0e-225 784.6 811 55.5
Gohir.A12G270000 Gossypium hirsutum HOM05D004562 ORTHO05D005435 2.6e-224 782.7 788 57.5
Peaxi162Scf00314g00332 Petunia axillaris HOM05D004562 ORTHO05D005435 5.9e-224 781.6 791 55.9
COL.COLO4_28896 Corchorus olitorius HOM05D004562 ORTHO05D005435 2.9e-223 779.2 782 57.5
CiPaw.16G096100 Carya illinoinensis HOM05D004562 ORTHO05D005435 4.2e-222 775.4 795 56.1
Cfa019638 Carpinus fangiana HOM05D004562 ORTHO05D005435 1.6e-221 773.5 813 55.4
CSS0019251 Camellia sinensis var. sinensis HOM05D004562 ORTHO05D005435 5.2e-220 768.5 722 60.5
TAR374G0462 Trochodendron aralioides HOM05D004562 ORTHO05D005435 9.7e-219 764.2 690 61.9
MD14G1237500 Malus domestica HOM05D004562 ORTHO05D005435 1.2e-216 757.3 801 54.7
CAN.G843.49 Capsicum annuum HOM05D004562 ORTHO05D005435 1.9e-214 750.0 784 56.6
RcHm_v2.0_Chr7g0178201 Rosa chinensis HOM05D004562 ORTHO05D005435 1.9e-214 750.0 778 56.2
PGSC0003DMG400005676 Solanum tuberosum HOM05D004562 ORTHO05D005435 1.9e-214 750.0 790 55.2
Sopen03g037570 Solanum pennellii HOM05D004562 ORTHO05D005435 4.2e-214 748.8 780 55.3
Ciclev10007290m.g Citrus clementina HOM05D004562 ORTHO05D005435 5.5e-214 748.4 802 54.5
Sed0003970 Sechium edule HOM05D004562 ORTHO05D005435 9.4e-214 747.7 681 60.4
FAN18G3714 Fragaria x ananassa HOM05D004562 ORTHO05D005435 2.1e-213 746.5 776 55.5
FvH4_5g17490 Fragaria vesca HOM05D004562 ORTHO05D005435 3.6e-213 745.7 776 55.5
Solyc03g118620.3 Solanum lycopersicum HOM05D004562 ORTHO05D005435 8.0e-213 744.6 778 55.0
Glyma.08G055400 Glycine max HOM05D004562 ORTHO05D005435 1.4e-212 743.8 782 54.7
CiPaw.15G144500 Carya illinoinensis HOM05D004562 ORTHO05D005435 3.0e-212 742.7 782 55.2
TWI60G0891 Tripterygium wilfordii HOM05D004562 ORTHO05D005435 6.8e-212 741.5 799 54.7
Medtr8g107440 Medicago truncatula HOM05D004562 ORTHO05D005435 1.5e-211 740.3 775 54.5
FAN08G1802 Fragaria x ananassa HOM05D004562 ORTHO05D005435 3.4e-211 739.2 776 55.3
Actinidia35140 Actinidia chinensis HOM05D004562 ORTHO05D005435 5.7e-211 738.4 807 53.3
FAN13G2245 Fragaria x ananassa HOM05D004562 ORTHO05D005435 1.7e-210 736.9 776 55.2
Ca_17180_v3 Cicer arietinum L. HOM05D004562 ORTHO05D005435 3.7e-210 735.7 773 54.7
CsaV3_1G004480 Cucumis sativus L. HOM05D004562 ORTHO05D005435 6.3e-210 734.9 669 60.2
MBI13_g01852_MAGBIO Magnolia biondii HOM05D004562 ORTHO05D005435 8.3e-210 734.6 803 53.4
MELO3C017375.2 Cucumis melo HOM05D004562 ORTHO05D005435 5.4e-209 731.9 663 60.6
FAN04G0449 Fragaria x ananassa HOM05D004562 ORTHO05D005435 7.0e-209 731.5 777 55.3
MD06G1228300 Malus domestica HOM05D004562 ORTHO05D005435 2.7e-208 729.6 788 53.9
Aqoxy3G00029 Aquilegia oxysepala HOM05D004562 ORTHO05D005435 5.9e-208 728.4 796 53.5
Nn4g24285 Nelumbo nucifera HOM05D004562 ORTHO05D005435 5.9e-208 728.4 798 54.3
PGR044G1246 Punica granatum HOM05D004562 ORTHO05D005435 5.9e-208 728.4 799 54.2
Lj4g0011431 Lotus japonicus HOM05D004562 ORTHO05D005435 1.0e-207 727.6 777 55.0
Glyma.05G247000 Glycine max HOM05D004562 ORTHO05D005435 1.3e-207 727.2 794 53.1
Psat7g001240 Pisum sativum HOM05D004562 ORTHO05D005435 6.5e-207 724.9 801 52.7
Phvul.002G331100 Phaseolus vulgaris HOM05D004562 ORTHO05D005435 7.2e-206 721.5 782 53.7
HanXRQChr09g0268071 Helianthus annuus HOM05D004562 ORTHO05D005435 2.2e-202 709.9 790 52.7
Gohir.D02G121900 Gossypium hirsutum HOM05D004562 ORTHO05D005435 2.8e-202 709.5 688 57.6
Eucgr.K02277 Eucalyptus grandis HOM05D004562 ORTHO05D005435 3.7e-202 709.1 778 54.4
arahy.Tifrunner.gnm1.ann1.G227WQ Arachis hypogaea HOM05D004562 ORTHO05D005435 3.1e-201 706.1 779 53.4
Lalb_Chr05g0221581 Lupinus albus HOM05D004562 ORTHO05D005435 3.1e-201 706.1 775 53.0
Sed0022497 Sechium edule HOM05D004562 ORTHO05D005435 4.1e-201 705.7 666 59.0
Gorai.005G132200 Gossypium raimondii HOM05D004562 ORTHO05D005435 5.4e-201 705.3 688 57.3
unitig_46.g18720 Utricularia gibba HOM05D004562 ORTHO05D005435 1.6e-200 703.7 667 59.4
Lalb_Chr09g0330331 Lupinus albus HOM05D004562 ORTHO05D005435 2.0e-200 703.4 774 52.8
GSVIVG01008458001 Vitis vinifera HOM05D004562 ORTHO05D005435 2.7e-200 703.0 758 54.4
Potri.015G036300 Populus trichocarpa HOM05D004562 ORTHO05D005435 4.5e-200 702.2 804 52.2
TPR.G1465 Trifolium pratense HOM05D004562 ORTHO05D005435 1.7e-199 700.3 761 53.6
arahy.Tifrunner.gnm1.ann1.WQ60SD Arachis hypogaea HOM05D004562 ORTHO05D005435 6.6e-199 698.4 779 53.1
Manes.06G004700 Manihot esculenta HOM05D004562 ORTHO05D005435 1.6e-197 693.7 772 53.1
Haze_18884 Corylus avellana HOM05D004562 ORTHO05D005435 8.9e-196 688.0 808 51.9
Sc12g0007950 Simmondsia chinensis HOM05D004562 ORTHO05D005435 1.8e-193 680.2 792 52.4
Sabra15G0029800 Salix brachista HOM05D004562 ORTHO05D005435 2.4e-193 679.9 809 50.4
Nitab4.5_0001264g0030 Nicotiana tabacum HOM05D004562 ORTHO05D005435 3.5e-192 676.0 565 64.2
AUR62029906 Chenopodium quinoa HOM05D004562 ORTHO05D005435 5.0e-191 672.2 804 50.2
PSO478G3379 Papaver somniferum HOM05D004562 ORTHO05D005435 8.6e-191 671.4 817 50.3
THA.LOC104820345 Tarenaya hassleriana HOM05D004562 ORTHO05D005435 8.6e-191 671.4 808 51.2
Lsat_1_v5_gn_2_14940 Lactuca sativa HOM05D004562 ORTHO05D005435 5.6e-190 668.7 770 51.2
Nn3g18314 Nelumbo nucifera HOM05D004562 ORTHO05D005435 5.6e-190 668.7 860 48.1
EL10Ac8g19501 Beta vulgaris HOM05D004562 ORTHO05D005435 3.6e-189 666.0 794 50.5
ClCG06G014190 Citrullus lanatus HOM05D004562 ORTHO05D005435 4.7e-189 665.6 669 56.7
HanXRQChr02g0032401 Helianthus annuus HOM05D004562 ORTHO05D005435 4.7e-189 665.6 778 50.5
AUR62033795 Chenopodium quinoa HOM05D004562 ORTHO05D005435 8.0e-189 664.8 805 50.2
ECA238G1924 Erigeron canadensis HOM05D004562 ORTHO05D005435 1.4e-188 664.1 806 49.3
Potri.012G045300 Populus trichocarpa HOM05D004562 ORTHO05D005435 4.0e-188 662.5 521 67.2
Ah.14g085940 Amaranthus hybridus HOM05D004562 ORTHO05D005435 2.4e-185 653.3 800 50.2
Lj5A159T41 Lonicera japonica HOM05D004562 ORTHO05D005435 9.2e-185 651.4 810 50.6
Hund22308 Selenicereus undatus HOM05D004562 ORTHO05D005435 2.7e-184 649.8 775 50.8
VMungo0251G1597 Vigna mungo HOM05D004562 ORTHO05D005435 3.0e-183 646.4 789 49.3
Nitab4.5_0010397g0020 Nicotiana tabacum HOM05D004562 ORTHO05D005435 4.3e-182 642.5 460 72.0
ATR0753G019 Amborella trichopoda HOM05D004562 ORTHO05D005435 7.3e-182 641.7 788 49.2
DCAR_011617 Daucus carota HOM05D004562 ORTHO05D005435 3.6e-181 639.4 777 49.2
CARHR038150 Cardamine hirsuta HOM05D004562 ORTHO05D005435 4.7e-181 639.0 797 48.1
AL3G31090 Arabidopsis lyrata HOM05D004562 ORTHO05D005435 1.2e-179 634.4 801 48.3
BcaC08g43044 Brassica carinata HOM05D004562 ORTHO05D005435 1.5e-179 634.0 686 52.6
Carub.0003s1765 Capsella rubella HOM05D004562 ORTHO05D005435 1.5e-179 634.0 797 47.9
C06p03060 Brassica napus HOM05D004562 ORTHO05D005435 2.0e-179 633.6 683 52.6
A06p04420 Brassica napus HOM05D004562 ORTHO05D005435 2.6e-179 633.3 782 49.0
BolC6t35426H Brassica oleracea HOM05D004562 ORTHO05D005435 4.4e-179 632.5 683 52.6
PSO017G6436 Papaver somniferum HOM05D004562 ORTHO05D005435 8.3e-178 628.2 818 48.0
Thhalv10019973m.g Eutrema salsugineum HOM05D004562 ORTHO05D005435 2.4e-177 626.7 801 48.1
Sp1g35480 Schrenkiella parvula HOM05D004562 ORTHO05D005435 5.4e-177 625.5 799 47.2
BraA06t23647Z Brassica rapa HOM05D004562 ORTHO05D005435 9.2e-177 624.8 690 52.0
Aa31LG10G5260 Aethionema arabicum HOM05D004562 ORTHO05D005435 1.6e-176 624.0 809 47.3
BcaB07g33749 Brassica carinata HOM05D004562 ORTHO05D005435 2.1e-176 623.6 771 48.5
BraA05t22020Z Brassica rapa HOM05D004562 ORTHO05D005435 2.1e-176 623.6 789 48.4
Sp3g16040 Schrenkiella parvula HOM05D004562 ORTHO05D005435 1.0e-175 621.3 808 47.9
AT1G48540 Arabidopsis thaliana HOM05D004562 ORTHO05D005435 1.7e-175 620.5 798 47.4
A05p31880 Brassica napus HOM05D004562 ORTHO05D005435 5.1e-175 619.0 791 48.3
CARHR093250 Cardamine hirsuta HOM05D004562 ORTHO05D005435 1.1e-174 617.8 792 48.0
AL1G55180 Arabidopsis lyrata HOM05D004562 ORTHO05D005435 2.5e-174 616.7 803 46.2
BcaC05g28736 Brassica carinata HOM05D004562 ORTHO05D005435 3.3e-174 616.3 793 47.8
BolC5t33574H Brassica oleracea HOM05D004562 ORTHO05D005435 3.3e-174 616.3 793 47.8
HPP92_016742 Vanilla planifolia HOM05D004562 ORTHO05D005435 5.6e-174 615.5 670 53.0
Thhalv10011201m.g Eutrema salsugineum HOM05D004562 ORTHO05D005435 2.1e-173 613.6 786 47.1
Carub.0001s3765 Capsella rubella HOM05D004562 ORTHO05D005435 2.8e-173 613.2 806 47.4
AT3G17920 Arabidopsis thaliana HOM05D004562 ORTHO05D005435 6.2e-173 612.1 801 47.1
C05p48370 Brassica napus HOM05D004562 ORTHO05D005435 2.3e-172 610.1 802 47.4
BcaB06g25854 Brassica carinata HOM05D004562 ORTHO05D005435 5.2e-172 609.0 787 48.5
Thecc.03G058700 Theobroma cacao HOM05D004562 ORTHO05D005435 5.2e-172 609.0 787 49.3
Actinidia18882 Actinidia chinensis HOM05D004562 ORTHO05D005435 1.9e-169 600.5 667 52.0
Aa31LG8G4790 Aethionema arabicum HOM05D004562 ORTHO05D005435 3.5e-168 596.3 812 46.4
Cpa.g.sc3.379 Carica papaya HOM05D004562 ORTHO05D005435 6.0e-168 595.5 670 53.0
Zm00001eb008950 Zea mays HOM05D004562 ORTHO05D005435 4.7e-165 585.9 753 47.5
Duzib205G1225 Durio zibethinus HOM05D004562 ORTHO05D005435 6.8e-164 582.0 815 46.6
Os03g0221800 Oryza sativa ssp. japonica HOM05D004562 ORTHO05D005435 3.9e-159 566.2 664 51.2
SEGI_15130 Sequoiadendron giganteum HOM05D004562 ORTHO05D005435 3.6e-149 533.1 706 48.4
CSS0009282 Camellia sinensis var. sinensis HOM05D004562 ORTHO05D005435 5.1e-119 433.0 284 80.3
CSS0039239 Camellia sinensis var. sinensis HOM05D004562 ORTHO05D005435 5.1e-119 433.0 284 80.3
Pp3c10_10590 Physcomitrium patens HOM05D004562 ORTHO05D005435 2.0e-118 431.0 806 38.3
CDE05G0309 Ceratophyllum demersum HOM05D004562 ORTHO05D005435 4.3e-118 429.9 805 38.3
Mapoly0118s0042 Marchantia polymorpha HOM05D004562 ORTHO05D005435 6.9e-116 422.5 820 37.7
Atru.chr9.1669 Acer truncatum HOM05D004562 ORTHO05D005435 5.0e-114 416.4 534 47.6
Manes.14G172200 Manihot esculenta HOM05D004562 ORTHO05D005435 2.7e-99 367.5 537 43.6
Sabra12G0031500 Salix brachista HOM05D004562 ORTHO05D005435 1.3e-98 365.2 585 42.6
Gohir.A03G092940 Gossypium hirsutum HOM05D004562 ORTHO05D005435 1.6e-96 358.2 421 49.6
AagrBONN_evm.TU.Sc2ySwM_228.5527 Anthoceros agrestis HOM05D004562 ORTHO05D005435 2.6e-94 350.9 344 53.2
Gohir.A03G092980 Gossypium hirsutum HOM05D004562 ORTHO05D005435 3.8e-82 310.5 221 74.2
CSS0012259 Camellia sinensis var. sinensis HOM05D004562 ORTHO05D005435 1.6e-80 305.1 447 43.8
CSS0042944 Camellia sinensis var. sinensis HOM05D004562 ORTHO05D005435 2.8e-80 304.3 447 43.6
CBR_g38780 Chara braunii HOM05D004562 ORTHO05D005435 6.6e-58 229.9 237 51.9
Duzib084G0184 Durio zibethinus HOM05D004562 ORTHO05D005435 1.3e-53 215.7 361 41.8
SHI19076 Sapria himalayana HOM05D004562 ORTHO05D005435 7.8e-51 206.5 142 75.4
Hma1.2p1_0163F.1_g072990 Hydrangea macrophylla HOM05D004562 ORTHO05D005435 3.3e-49 201.1 342 42.1
SHI19074 Sapria himalayana HOM05D004562 ORTHO05D005435 1.7e-42 178.7 130 65.4
CAN.G1490.14 Capsicum annuum HOM05D004562 ORTHO05D005435 3.5e-35 154.5 93 84.9
CAN.G59.9 Capsicum annuum HOM05D004562 ORTHO05D005435 3.9e-34 151.0 173 53.8
CAN.G1687.2 Capsicum annuum HOM05D004562 ORTHO05D005435 2.5e-33 148.3 159 57.2
SHI19075 Sapria himalayana HOM05D004562 ORTHO05D005435 1.8e-31 142.1 91 72.5
MCO11G516 Micromonas commoda HOM05D004562 ORTHO05D005435 5.3e-23 114.0 394 29.2
CAN.G22.26 Capsicum annuum HOM05D001423 ORTHO05D001412 3.5e-19 101.3 58 77.6
AUR62044432 Chenopodium quinoa HOM05D004562 ORTHO05D005435 1.0e-13 83.2 401 26.2
SEGI_31258 Sequoiadendron giganteum HOM05D004562 ORTHO05D005435 1.8e-10 72.4 279 28.7
AagrBONN_evm.TU.Sc2ySwM_368.1004 Anthoceros agrestis HOM05D016773 ORTHO05D019668 1.9e-09 68.9 184 32.1
SHI19073 Sapria himalayana HOM05D004562 ORTHO05D005435 1.3e-08 66.2 287 23.7
Cfa024768 Carpinus fangiana HOM05D005225 ORTHO05D124687 7.7e-06 57.0 149 29.5


User provided reference genes

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