Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold172G39018 Striga asiatica HOM05D006794 ORTHO05D008322 4.1e-72 274.6 139 100.0
Migut.D01320 Erythranthe guttata HOM05D006794 ORTHO05D008322 7.5e-42 174.1 147 68.0
Oeu046160.1 Olea europaea HOM05D006794 ORTHO05D008322 7.8e-31 137.5 148 57.4
SalBow1G0629 Salvia bowleyana HOM05D006794 ORTHO05D008322 4.0e-27 125.2 141 56.7
Atru.chr9.1672 Acer truncatum HOM05D006794 ORTHO05D008322 2.0e-18 96.3 156 44.2
GSVIVG01008463001 Vitis vinifera HOM05D006794 ORTHO05D008322 2.0e-18 96.3 139 51.1
Solyc03g118630.3 Solanum lycopersicum HOM05D006794 ORTHO05D008322 4.4e-18 95.1 142 48.6
Sopen03g037580 Solanum pennellii HOM05D006794 ORTHO05D008322 5.8e-18 94.7 142 47.9
MELO3C002138.2 Cucumis melo HOM05D006794 ORTHO05D008322 1.1e-16 90.5 137 44.5
Lalb_Chr16g0386961 Lupinus albus HOM05D006794 ORTHO05D008322 1.4e-16 90.1 131 53.4
Duzib084G0148 Durio zibethinus HOM05D006794 ORTHO05D008322 2.4e-16 89.4 146 47.3
QL10p030576 Quercus lobata HOM05D006794 ORTHO05D008322 2.4e-16 89.4 141 46.8
Nitab4.5_0001264g0020 Nicotiana tabacum HOM05D006794 ORTHO05D008322 5.4e-16 88.2 151 45.0
Psat4g000080 Pisum sativum HOM05D006794 ORTHO05D008322 7.1e-16 87.8 135 47.4
PGSC0003DMG400005675 Solanum tuberosum HOM05D006794 ORTHO05D008322 9.3e-16 87.4 145 48.3
ClCG04G010570 Citrullus lanatus HOM05D006794 ORTHO05D008322 1.2e-15 87.0 137 44.5
Thecc.03G058000 Theobroma cacao HOM05D006794 ORTHO05D008322 1.2e-15 87.0 146 47.9
Duzib068G0617 Durio zibethinus HOM05D006794 ORTHO05D008322 2.1e-15 86.3 124 50.8
FAN13G2800 Fragaria x ananassa HOM05D006794 ORTHO05D008322 4.6e-15 85.1 138 44.2
Ca_17183_v3 Cicer arietinum L. HOM05D006794 ORTHO05D008322 7.8e-15 84.3 125 48.0
CiPaw.15G144200 Carya illinoinensis HOM05D006794 ORTHO05D008322 1.7e-14 83.2 144 45.1
CiPaw.16G095900 Carya illinoinensis HOM05D006794 ORTHO05D008322 1.7e-14 83.2 139 45.3
Haze_18880 Corylus avellana HOM05D006794 ORTHO05D008322 1.9e-13 79.7 146 44.5
Peaxi162Scf00314g00315 Petunia axillaris HOM05D006794 ORTHO05D008322 1.9e-13 79.7 142 43.0
Cpa.g.sc3.383 Carica papaya HOM05D006794 ORTHO05D008322 4.3e-13 78.6 141 44.7
Gorai.008G290400 Gossypium raimondii HOM05D006794 ORTHO05D008322 1.3e-12 77.0 124 48.4
Sabra15G0031400 Salix brachista HOM05D006794 ORTHO05D008322 1.3e-12 77.0 140 43.6
PGR083G0475 Punica granatum HOM05D006794 ORTHO05D008322 1.6e-12 76.6 136 44.9
Cc04_g06140 Coffea canephora HOM05D006794 ORTHO05D008322 2.1e-12 76.3 150 40.7
Nn4g24277 Nelumbo nucifera HOM05D006794 ORTHO05D008322 2.8e-12 75.9 92 55.4
Cfa021396 Carpinus fangiana HOM05D006794 ORTHO05D008322 3.6e-12 75.5 147 42.9
Gohir.D12G270100 Gossypium hirsutum HOM05D006794 ORTHO05D008322 6.2e-12 74.7 124 47.6
Manes.06G005000 Manihot esculenta HOM05D006794 ORTHO05D008322 6.2e-12 74.7 94 53.2
THA.LOC104825595 Tarenaya hassleriana HOM05D006794 ORTHO05D008322 6.2e-12 74.7 138 42.8
Gohir.A12G269600 Gossypium hirsutum HOM05D006794 ORTHO05D008322 8.1e-12 74.3 123 45.5
Nitab4.5_0010223g0030 Nicotiana tabacum HOM05D006794 ORTHO05D008322 1.4e-11 73.6 148 41.2
TWI81G0550 Tripterygium wilfordii HOM05D006794 ORTHO05D008322 4.0e-11 72.0 146 42.5
CANSAT80G2635 Cannabis sativa HOM05D006794 ORTHO05D008322 6.9e-11 71.2 144 43.8
Hma1.2p1_0163F.1_g073020 Hydrangea macrophylla HOM05D006794 ORTHO05D008322 6.9e-11 71.2 140 42.9
BcaC09g48759 Brassica carinata HOM05D006794 ORTHO05D008322 1.2e-10 70.5 153 42.5
C01p46200 Brassica napus HOM05D006794 ORTHO05D008322 1.2e-10 70.5 153 42.5
BolC1t04582H Brassica oleracea HOM05D006794 ORTHO05D008322 1.2e-10 70.5 153 42.5
Dinv08202 Davidia involucrata HOM05D006794 ORTHO05D008322 1.2e-10 70.5 145 42.8
Sed0024550 Sechium edule HOM05D006794 ORTHO05D008322 1.2e-10 70.5 138 42.0
CANSAT80G0659 Cannabis sativa HOM05D006794 ORTHO05D008322 2.0e-10 69.7 146 43.2
Sed0017400 Sechium edule HOM05D000034 ORTHO05D000037 2.6e-10 69.3 132 41.7
Eucgr.B00988 Eucalyptus grandis HOM05D006794 ORTHO05D008322 3.4e-10 68.9 82 51.2
Sp3g16080 Schrenkiella parvula HOM05D006794 ORTHO05D008322 3.4e-10 68.9 146 40.4
Phvul.002G330800 Phaseolus vulgaris HOM05D006794 ORTHO05D008322 4.4e-10 68.6 132 44.7
Prupe.5G234500 Prunus persica HOM05D006794 ORTHO05D008322 5.8e-10 68.2 79 54.4
RcHm_v2.0_Chr7g0178231 Rosa chinensis HOM05D006794 ORTHO05D008322 7.6e-10 67.8 138 41.3
MD06G1228000 Malus domestica HOM05D006794 ORTHO05D008322 9.9e-10 67.4 78 56.4
Potri.012G045700 Populus trichocarpa HOM05D006794 ORTHO05D008322 9.9e-10 67.4 144 41.0
Potri.015G036900 Populus trichocarpa HOM05D006794 ORTHO05D008322 9.9e-10 67.4 138 41.3
MD01G1007300 Malus domestica HOM05D006794 ORTHO05D008322 1.3e-09 67.0 128 41.4
PSO210G4985 Papaver somniferum HOM05D006794 ORTHO05D008322 1.7e-09 66.6 161 34.8
PSO832G1236 Papaver somniferum HOM05D006794 ORTHO05D008322 3.8e-09 65.5 161 34.8
arahy.Tifrunner.gnm1.ann1.KQ26AL Arachis hypogaea HOM05D006794 ORTHO05D008322 4.9e-09 65.1 129 41.1
arahy.Tifrunner.gnm1.ann1.P2R0G6 Arachis hypogaea HOM05D006794 ORTHO05D008322 4.9e-09 65.1 129 41.1
Psat1g031080 Pisum sativum HOM05D006794 ORTHO05D008322 1.1e-08 63.9 141 43.3
COL.COLO4_04996 Corchorus olitorius HOM05D006794 ORTHO05D008322 1.4e-08 63.5 152 40.1
VMungo0251G1205 Vigna mungo HOM05D006794 ORTHO05D008322 1.4e-08 63.5 130 41.5
DCAR_013026 Daucus carota HOM05D006794 ORTHO05D008322 1.9e-08 63.2 88 46.6
Aa31LG8G4820 Aethionema arabicum HOM05D006794 ORTHO05D008322 3.2e-08 62.4 105 45.7
MD14G1237200 Malus domestica HOM05D006794 ORTHO05D008322 3.2e-08 62.4 141 38.3
Thhalv10021515m.g Eutrema salsugineum HOM05D006794 ORTHO05D008322 4.2e-08 62.0 97 48.5
FvH4_5g17460 Fragaria vesca HOM05D006794 ORTHO05D008322 4.2e-08 62.0 138 39.1
FAN18G3906 Fragaria x ananassa HOM05D006794 ORTHO05D008322 4.2e-08 62.0 138 39.1
Glyma.09G174700 Glycine max HOM05D006794 ORTHO05D008322 4.2e-08 62.0 70 58.6
Ca_25344_v3 Cicer arietinum L. HOM05D006794 ORTHO05D008322 5.4e-08 61.6 121 43.0
Medtr6g069830 Medicago truncatula HOM05D006794 ORTHO05D008322 5.4e-08 61.6 139 40.3
arahy.Tifrunner.gnm1.ann1.AT27RE Arachis hypogaea HOM05D006794 ORTHO05D008322 7.1e-08 61.2 142 42.3
CANSAT64G0030 Cannabis sativa HOM05D006794 ORTHO05D008322 7.1e-08 61.2 149 38.9
FAN08G0189 Fragaria x ananassa HOM05D006794 ORTHO05D008322 9.3e-08 60.8 135 37.8
Sabra12G0031800 Salix brachista HOM05D006794 ORTHO05D008322 9.3e-08 60.8 141 39.7
MBI19_g22477_MAGBIO Magnolia biondii HOM05D006794 ORTHO05D008322 1.2e-07 60.5 132 37.9
Glyma.08G055100 Glycine max HOM05D006794 ORTHO05D008322 1.6e-07 60.1 132 40.2
Phvul.004G150000 Phaseolus vulgaris HOM05D006794 ORTHO05D008322 1.6e-07 60.1 138 40.6
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.6e-07 60.1 134 36.6
TPR.G8635 Trifolium pratense HOM05D006794 ORTHO05D008322 1.6e-07 60.1 136 41.9
TAR622G0128 Trochodendron aralioides HOM05D006794 ORTHO05D008322 1.6e-07 60.1 72 55.6
VMungo0464G2014 Vigna mungo HOM05D006794 ORTHO05D008322 2.1e-07 59.7 138 40.6
arahy.Tifrunner.gnm1.ann1.PNUX28 Arachis hypogaea HOM05D006794 ORTHO05D008322 3.5e-07 58.9 142 41.5
FAN04G0930 Fragaria x ananassa HOM05D006794 ORTHO05D008322 4.6e-07 58.5 135 37.0
Lalb_Chr22g0353521 Lupinus albus HOM05D006794 ORTHO05D008322 4.6e-07 58.5 134 39.6
Lj2g0023485 Lotus japonicus HOM05D006794 ORTHO05D008322 7.9e-07 57.8 72 56.9
AT3G17950 Arabidopsis thaliana HOM05D006794 ORTHO05D008322 1.7e-06 56.6 82 50.0
Glyma.07G103100 Glycine max HOM05D006794 ORTHO05D008322 3.0e-06 55.8 128 39.8
CSS0048798 Camellia sinensis var. sinensis HOM05D006794 ORTHO05D008322 3.9e-06 55.5 144 37.5
AL3G31120 Arabidopsis lyrata HOM05D006794 ORTHO05D008322 6.6e-06 54.7 82 50.0
BcaB04g20803 Brassica carinata HOM05D006794 ORTHO05D008322 6.6e-06 54.7 82 53.7
BcaC01g03720 Brassica carinata HOM05D006794 ORTHO05D008322 6.6e-06 54.7 84 53.6
C03p49310 Brassica napus HOM05D006794 ORTHO05D008322 6.6e-06 54.7 83 51.8
BraA01t03709Z Brassica rapa HOM05D006794 ORTHO05D008322 8.7e-06 54.3 76 50.0


User provided reference genes

Program Settings