Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold172G39000 Striga asiatica HOM05D005555 ORTHO05D006923 6.2e-244 847.0 435 100.0
Migut.M01757 Erythranthe guttata HOM05D005555 ORTHO05D006923 3.5e-202 708.4 440 84.3
MSTRG.6923 Avicennia marina HOM05D005555 ORTHO05D006923 2.2e-201 705.7 442 83.7
GSVIVG01037655001 Vitis vinifera HOM05D005555 ORTHO05D006923 8.6e-185 650.6 434 77.4
Gorai.009G438400 Gossypium raimondii HOM05D005555 ORTHO05D006923 3.1e-182 642.1 429 76.7
CSS0046165 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 2.6e-181 639.0 435 75.9
Duzib268G1179 Durio zibethinus HOM05D005555 ORTHO05D006923 3.7e-180 635.2 429 75.8
Eucgr.F03470 Eucalyptus grandis HOM05D005555 ORTHO05D006923 6.4e-180 634.4 431 76.8
Dinv22259 Davidia involucrata HOM05D005555 ORTHO05D006923 8.3e-180 634.0 442 74.7
QL08p010014 Quercus lobata HOM05D005555 ORTHO05D006923 1.4e-179 633.3 431 75.4
RcHm_v2.0_Chr2g0139231 Rosa chinensis HOM05D005555 ORTHO05D006923 9.2e-179 630.6 432 74.8
Lj6g0008930 Lotus japonicus HOM05D005555 ORTHO05D006923 1.0e-177 627.1 438 74.0
Gohir.A04G016500 Gossypium hirsutum HOM05D005555 ORTHO05D006923 6.6e-177 624.4 429 75.3
TWI39G0347 Tripterygium wilfordii HOM05D005555 ORTHO05D006923 6.6e-177 624.4 435 75.2
Solyc12g005050.2 Solanum lycopersicum HOM05D005555 ORTHO05D006923 8.6e-177 624.0 436 75.0
Cc05_g13620 Coffea canephora HOM05D005555 ORTHO05D006923 9.5e-176 620.5 434 74.9
CsaV3_7G021840 Cucumis sativus L. HOM05D005555 ORTHO05D006923 1.2e-175 620.2 431 74.5
Gohir.D05G369700 Gossypium hirsutum HOM05D005555 ORTHO05D006923 4.7e-175 618.2 429 74.8
Sopen12g001050 Solanum pennellii HOM05D005555 ORTHO05D006923 4.7e-175 618.2 436 74.3
Cc07_g19690 Coffea canephora HOM05D005555 ORTHO05D006923 6.2e-175 617.8 434 75.1
Nitab4.5_0008473g0010 Nicotiana tabacum HOM05D005555 ORTHO05D006923 8.0e-175 617.5 438 74.4
Thecc.07G035900 Theobroma cacao HOM05D005555 ORTHO05D006923 1.4e-174 616.7 429 75.8
Sed0005603 Sechium edule HOM05D005555 ORTHO05D006923 2.3e-174 615.9 433 73.2
arahy.Tifrunner.gnm1.ann1.UR7PB1 Arachis hypogaea HOM05D005555 ORTHO05D006923 2.0e-173 612.8 439 73.3
VMungo0540G1244 Vigna mungo HOM05D005555 ORTHO05D006923 2.0e-173 612.8 431 73.3
Lalb_Chr20g0113831 Lupinus albus HOM05D005555 ORTHO05D006923 2.6e-173 612.5 439 72.4
arahy.Tifrunner.gnm1.ann1.P3VUIG Arachis hypogaea HOM05D005555 ORTHO05D006923 5.8e-173 611.3 439 72.9
Cpa.g.sc12.303 Carica papaya HOM05D005555 ORTHO05D006923 5.8e-173 611.3 430 74.0
FAN14G2902 Fragaria x ananassa HOM05D005555 ORTHO05D006923 5.8e-173 611.3 434 73.3
TAR627G0887 Trochodendron aralioides HOM05D005555 ORTHO05D006923 9.8e-173 610.5 435 73.6
PGSC0003DMG400027869 Solanum tuberosum HOM05D005555 ORTHO05D006923 8.3e-172 607.4 442 72.9
Ciclev10008353m.g Citrus clementina HOM05D005555 ORTHO05D006923 1.4e-171 606.7 431 73.8
Actinidia35345 Actinidia chinensis HOM05D005555 ORTHO05D006923 1.9e-171 606.3 435 73.1
TPR.G33802 Trifolium pratense HOM05D005555 ORTHO05D006923 3.2e-171 605.5 448 71.9
arahy.Tifrunner.gnm1.ann1.QY89IE Arachis hypogaea HOM05D005555 ORTHO05D006923 7.0e-171 604.4 439 72.4
Lj8C169T24 Lonicera japonica HOM05D005555 ORTHO05D006923 7.0e-171 604.4 474 69.6
Glyma.08G316800 Glycine max HOM05D005555 ORTHO05D006923 2.7e-170 602.4 436 71.6
FAN05G3309 Fragaria x ananassa HOM05D005555 ORTHO05D006923 3.5e-170 602.1 434 72.6
Psat5g178680 Pisum sativum HOM05D005555 ORTHO05D006923 3.5e-170 602.1 436 72.0
Manes.15G071400 Manihot esculenta HOM05D005555 ORTHO05D006923 4.6e-170 601.7 431 73.5
Glyma.18G096300 Glycine max HOM05D005555 ORTHO05D006923 6.0e-170 601.3 436 71.3
CSS0038584 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 7.8e-170 600.9 437 72.5
Phvul.006G044000 Phaseolus vulgaris HOM05D005555 ORTHO05D006923 1.3e-169 600.1 436 71.3
THA.LOC104817858 Tarenaya hassleriana HOM05D005555 ORTHO05D006923 1.3e-169 600.1 430 73.7
CiPaw.11G190000 Carya illinoinensis HOM05D005555 ORTHO05D006923 2.3e-169 599.4 432 72.2
BcaC08g43248 Brassica carinata HOM05D005555 ORTHO05D006923 5.1e-169 598.2 422 75.4
C06p05960 Brassica napus HOM05D005555 ORTHO05D006923 5.1e-169 598.2 422 75.4
BolC6t35709H Brassica oleracea HOM05D005555 ORTHO05D006923 5.1e-169 598.2 422 75.4
CANSAT11G1088 Cannabis sativa HOM05D005555 ORTHO05D006923 5.1e-169 598.2 434 71.9
CiPaw.12G130100 Carya illinoinensis HOM05D005555 ORTHO05D006923 8.6e-169 597.4 432 71.8
A06p02920 Brassica napus HOM05D005555 ORTHO05D006923 1.1e-168 597.0 422 75.4
BraA06t23497Z Brassica rapa HOM05D005555 ORTHO05D006923 1.1e-168 597.0 422 75.4
unitig_744.g24404 Utricularia gibba HOM05D005555 ORTHO05D006923 1.1e-168 597.0 431 73.1
Sp1g37550 Schrenkiella parvula HOM05D005555 ORTHO05D006923 2.5e-168 595.9 430 74.7
Nn1g07133 Nelumbo nucifera HOM05D005555 ORTHO05D006923 4.3e-168 595.1 442 69.5
Hund15555 Selenicereus undatus HOM05D005555 ORTHO05D006923 7.3e-168 594.3 429 71.3
Rhsim06G0217300 Rhododendron simsii HOM05D005555 ORTHO05D006923 9.5e-168 594.0 452 69.5
BcaC08g43250 Brassica carinata HOM05D005555 ORTHO05D006923 1.2e-167 593.6 422 74.6
MD17G1190200 Malus domestica HOM05D005555 ORTHO05D006923 1.6e-167 593.2 433 71.1
ECA240G0357 Erigeron canadensis HOM05D005555 ORTHO05D006923 2.8e-167 592.4 425 72.2
ClCG09G010820 Citrullus lanatus HOM05D005555 ORTHO05D006923 6.2e-167 591.3 470 68.1
Prupe.3G065100 Prunus persica HOM05D005555 ORTHO05D006923 1.8e-166 589.7 423 72.6
PSO541G4760 Papaver somniferum HOM05D005555 ORTHO05D006923 3.1e-166 589.0 428 72.0
Aa31LG10G3630 Aethionema arabicum HOM05D005555 ORTHO05D006923 4.0e-166 588.6 426 73.2
CAN.G542.3 Capsicum annuum HOM05D005555 ORTHO05D006923 4.0e-166 588.6 436 71.3
Medtr3g052180 Medicago truncatula HOM05D005555 ORTHO05D006923 4.0e-166 588.6 431 71.5
AL1G58400 Arabidopsis lyrata HOM05D005555 ORTHO05D006923 1.5e-165 586.6 425 74.4
Carub.0001s3974 Capsella rubella HOM05D005555 ORTHO05D006923 1.5e-165 586.6 425 74.4
Thhalv10011513m.g Eutrema salsugineum HOM05D005555 ORTHO05D006923 2.0e-165 586.3 422 74.6
Gorai.009G438500 Gossypium raimondii HOM05D005555 ORTHO05D006923 3.4e-165 585.5 429 71.8
Aqoxy1G02148 Aquilegia oxysepala HOM05D005555 ORTHO05D006923 5.8e-165 584.7 427 70.7
AT1G50710 Arabidopsis thaliana HOM05D005555 ORTHO05D006923 5.8e-165 584.7 425 74.1
MELO3C013162.2 Cucumis melo HOM05D005555 ORTHO05D006923 3.7e-164 582.0 435 71.0
Nitab4.5_0000981g0050 Nicotiana tabacum HOM05D005555 ORTHO05D006923 6.4e-164 581.3 474 68.4
DCAR_016709 Daucus carota HOM05D005555 ORTHO05D006923 1.1e-163 580.5 435 70.8
EL10Ac2g03146 Beta vulgaris HOM05D005555 ORTHO05D006923 1.2e-162 577.0 457 67.8
PGR031G0129 Punica granatum HOM05D005555 ORTHO05D006923 1.2e-162 577.0 436 70.2
Ah.10g032310 Amaranthus hybridus HOM05D005555 ORTHO05D006923 1.6e-162 576.6 435 69.7
arahy.Tifrunner.gnm1.ann1.GVQ212 Arachis hypogaea HOM05D005555 ORTHO05D006923 4.6e-162 575.1 467 65.7
Medtr5g049170 Medicago truncatula HOM05D005555 ORTHO05D006923 7.8e-162 574.3 431 69.4
BcaB02g11175 Brassica carinata HOM05D005555 ORTHO05D006923 3.9e-161 572.0 421 72.9
CARHR040810 Cardamine hirsuta HOM05D005555 ORTHO05D006923 3.9e-161 572.0 425 72.9
Lsat_1_v5_gn_2_47780 Lactuca sativa HOM05D005555 ORTHO05D006923 5.1e-161 571.6 429 70.4
PSO675G4173 Papaver somniferum HOM05D005555 ORTHO05D006923 8.6e-161 570.9 428 69.6
FAN02G4472 Fragaria x ananassa HOM05D005555 ORTHO05D006923 1.1e-160 570.5 434 69.1
Atru.chr2.3417 Acer truncatum HOM05D005555 ORTHO05D006923 2.1e-159 566.2 431 69.1
BraA05t20906Z Brassica rapa HOM05D005555 ORTHO05D006923 2.4e-158 562.8 417 72.7
Potri.011G090800 Populus trichocarpa HOM05D005555 ORTHO05D006923 1.5e-157 560.1 430 70.0
Sc03g0008570 Simmondsia chinensis HOM05D005555 ORTHO05D006923 2.6e-157 559.3 385 74.3
A05p19990 Brassica napus HOM05D005555 ORTHO05D006923 4.4e-157 558.5 417 72.9
Nn1g03520 Nelumbo nucifera HOM05D005555 ORTHO05D006923 6.4e-156 554.7 438 65.1
DCAR_001508 Daucus carota HOM05D005555 ORTHO05D006923 8.4e-156 554.3 433 69.3
HanXRQChr03g0076481 Helianthus annuus HOM05D005555 ORTHO05D006923 2.4e-155 552.7 409 70.9
MD09G1208700 Malus domestica HOM05D005555 ORTHO05D006923 4.2e-155 552.0 416 69.7
Peaxi162Scf00660g00816 Petunia axillaris HOM05D005555 ORTHO05D006923 5.4e-155 551.6 399 74.2
CDE04G3207 Ceratophyllum demersum HOM05D005555 ORTHO05D006923 2.3e-153 546.2 432 66.2
Ca_14731_v3 Cicer arietinum L. HOM05D005555 ORTHO05D006923 1.1e-152 543.9 520 58.8
CSS0007038 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 4.3e-152 542.0 446 67.0
BcaB07g33510 Brassica carinata HOM05D005555 ORTHO05D006923 1.1e-150 537.3 436 68.1
MD03G1200100 Malus domestica HOM05D005555 ORTHO05D006923 1.4e-150 537.0 425 66.1
MBI05_g12021_MAGBIO Magnolia biondii HOM05D005555 ORTHO05D006923 1.6e-146 523.5 432 66.9
ATR0752G192 Amborella trichopoda HOM05D005555 ORTHO05D006923 2.3e-145 519.6 439 62.4
Sabra11G0086200 Salix brachista HOM05D005555 ORTHO05D006923 3.3e-144 515.8 431 66.4
AUR62018195 Chenopodium quinoa HOM05D005555 ORTHO05D006923 1.1e-142 510.8 440 63.9
HanXRQChr05g0134351 Helianthus annuus HOM05D005555 ORTHO05D006923 3.8e-140 502.3 436 63.5
vmacro11723 Vaccinium macrocarpon HOM05D005555 ORTHO05D006923 1.9e-139 500.0 530 55.3
Haze_09680 Corylus avellana HOM05D005555 ORTHO05D006923 2.1e-138 496.5 494 58.5
Dinv40759 Davidia involucrata HOM05D005555 ORTHO05D006923 6.7e-137 491.5 395 70.4
Cfa020338 Carpinus fangiana HOM05D005555 ORTHO05D006923 1.5e-136 490.3 381 68.5
HPP92_010410 Vanilla planifolia HOM05D005555 ORTHO05D006923 2.1e-135 486.5 431 62.2
RcHm_v2.0_Chr5g0039771 Rosa chinensis HOM05D005555 ORTHO05D006923 7.1e-131 471.5 424 58.5
Gohir.D05G369900 Gossypium hirsutum HOM05D005555 ORTHO05D006923 2.7e-130 469.5 429 61.8
Gohir.D05G370300 Gossypium hirsutum HOM05D005555 ORTHO05D006923 1.8e-129 466.8 377 68.2
FvH4_3g22760 Fragaria vesca HOM05D005555 ORTHO05D006923 1.1e-126 457.6 423 58.2
FvH4_6g31880 Fragaria vesca HOM05D005555 ORTHO05D006923 9.0e-126 454.5 331 72.5
Zm00001eb230170 Zea mays HOM05D005555 ORTHO05D006923 9.3e-123 444.5 430 59.3
SMO352G0045 Selaginella moellendorffii HOM05D005555 ORTHO05D006923 2.7e-122 443.0 417 58.3
Mapoly0032s0110 Marchantia polymorpha HOM05D005555 ORTHO05D006923 6.1e-122 441.8 436 54.6
Prupe.4G214200 Prunus persica HOM05D005555 ORTHO05D006923 1.1e-120 437.6 371 63.1
Sed0020027 Sechium edule HOM05D005555 ORTHO05D006923 3.7e-119 432.6 407 61.2
arahy.Tifrunner.gnm1.ann1.92YVPD Arachis hypogaea HOM05D005555 ORTHO05D006923 9.0e-118 427.9 430 54.7
TPR.G5778 Trifolium pratense HOM05D005555 ORTHO05D006923 2.6e-117 426.4 347 66.0
FAN16G3656 Fragaria x ananassa HOM05D005555 ORTHO05D006923 1.2e-114 417.5 404 56.4
arahy.Tifrunner.gnm1.ann1.21WID0 Arachis hypogaea HOM05D005555 ORTHO05D006923 2.8e-111 406.4 433 52.7
AUR62038682 Chenopodium quinoa HOM05D005555 ORTHO05D006923 1.8e-110 403.7 438 53.7
Pp3c17_11280 Physcomitrium patens HOM05D005555 ORTHO05D006923 4.5e-109 399.1 430 53.0
FAN25G0297 Fragaria x ananassa HOM05D005555 ORTHO05D006923 1.0e-97 361.3 360 55.6
Medtr5g049150 Medicago truncatula HOM05D005555 ORTHO05D006923 1.6e-69 267.7 216 65.3
CBR_g19746 Chara braunii HOM05D005555 ORTHO05D006923 5.0e-60 236.1 385 37.7
CBR_g6714 Chara braunii HOM05D005555 ORTHO05D006923 2.2e-55 220.7 426 34.5
Os02g0119100 Oryza sativa ssp. japonica HOM05D005555 ORTHO05D006923 8.7e-36 155.6 209 47.8
TPR.G5733 Trifolium pratense HOM05D005555 ORTHO05D006923 6.0e-29 132.9 84 78.6
Lsat_1_v5_gn_9_94361 Lactuca sativa HOM05D005555 ORTHO05D006923 8.1e-18 95.9 55 83.6
Hma1.2p1_0206F.1_g087650 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 2.0e-16 91.3 46 89.1
Hma1.2p1_0545F.1_g176020 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 2.0e-16 91.3 46 89.1
Actinidia13832 Actinidia chinensis HOM05D005555 ORTHO05D006923 7.2e-06 56.2 53 62.3


User provided reference genes

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