Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 4.1e-270 934.1 455 100.0
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 2.0e-176 622.9 457 70.9
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 5.7e-163 578.2 463 67.2
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 5.0e-159 565.1 463 65.7
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 2.2e-154 549.7 468 62.8
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 3.8e-151 538.9 466 62.4
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 1.0e-148 530.8 472 60.8
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 3.0e-148 529.3 471 60.9
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 9.7e-147 524.2 469 61.2
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 9.7e-147 524.2 468 60.3
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 1.7e-146 523.5 510 56.9
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 1.1e-145 520.8 467 59.3
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 1.8e-145 520.0 475 60.6
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 2.4e-145 519.6 470 60.6
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 1.5e-144 516.9 447 62.0
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 1.7e-143 513.5 487 58.9
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 1.2e-141 507.3 458 59.2
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 1.6e-141 506.9 476 59.9
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 2.7e-141 506.1 476 57.6
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 3.6e-141 505.8 456 59.4
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 4.7e-141 505.4 469 59.3
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 6.1e-141 505.0 469 59.1
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 1.4e-140 503.8 476 58.4
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 2.3e-140 503.1 470 58.1
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 3.0e-140 502.7 463 58.5
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 1.5e-139 500.4 467 58.7
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 4.4e-139 498.8 465 58.9
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 1.7e-138 496.9 469 58.6
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 4.8e-138 495.4 462 58.2
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 3.1e-137 492.7 471 56.7
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 5.3e-137 491.9 469 57.8
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 9.1e-137 491.1 474 57.8
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 9.1e-137 491.1 471 59.0
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 3.5e-136 489.2 470 57.0
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 3.5e-136 489.2 469 57.4
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 1.7e-135 486.9 470 56.2
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 1.1e-134 484.2 475 57.5
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 1.9e-134 483.4 472 57.4
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 4.2e-134 482.3 467 58.2
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 1.2e-133 480.7 469 55.9
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.2e-133 480.7 475 57.5
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.6e-133 480.3 463 57.5
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 3.6e-133 479.2 463 56.4
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 6.1e-133 478.4 465 55.3
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 1.0e-132 477.6 468 55.8
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 1.4e-132 477.2 367 65.9
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 4.0e-132 475.7 466 56.0
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 2.6e-131 473.0 493 53.1
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 3.3e-131 472.6 366 67.2
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 3.3e-131 472.6 468 56.6
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 5.7e-131 471.9 470 55.1
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 9.7e-131 471.1 476 55.0
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 1.7e-130 470.3 459 56.6
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 2.8e-130 469.5 357 68.6
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 2.8e-130 469.5 474 55.7
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 2.8e-130 469.5 469 54.4
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 6.3e-130 468.4 463 54.9
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 4.1e-129 465.7 471 53.3
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 5.3e-129 465.3 404 61.6
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 5.3e-129 465.3 467 55.5
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 2.0e-128 463.4 487 54.4
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 1.0e-127 461.1 359 66.3
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 1.3e-127 460.7 459 55.6
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 1.3e-127 460.7 472 53.4
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 2.2e-127 459.9 459 55.1
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 1.9e-126 456.8 467 55.2
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 4.2e-126 455.7 469 53.9
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 4.2e-126 455.7 467 54.4
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 1.6e-125 453.8 469 53.1
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 3.6e-125 452.6 466 52.4
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 4.7e-125 452.2 472 52.1
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 3.0e-124 449.5 373 63.3
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 5.2e-124 448.7 467 51.4
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 8.8e-124 448.0 480 52.9
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 2.6e-123 446.4 472 52.8
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 2.6e-123 446.4 480 52.5
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 3.4e-123 446.0 361 64.3
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 5.7e-123 445.3 466 52.8
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 5.7e-123 445.3 303 72.6
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 3.7e-122 442.6 467 52.0
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 4.8e-122 442.2 475 53.7
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 6.3e-122 441.8 468 53.2
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 4.1e-121 439.1 485 50.5
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 5.0e-119 432.2 519 48.0
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 2.5e-118 429.9 397 57.7
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 5.5e-118 428.7 397 57.4
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 2.8e-117 426.4 420 54.8
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 4.5e-112 409.1 394 58.1
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 1.7e-111 407.1 483 49.7
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 3.8e-111 406.0 460 51.5
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 6.1e-109 398.7 406 53.4
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 1.8e-108 397.1 479 48.6
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 8.9e-108 394.8 482 48.3
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 2.6e-107 393.3 369 56.1
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 4.1e-105 386.0 400 51.8
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 2.5e-102 376.7 355 54.9
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 6.2e-101 372.1 332 60.2
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 1.1e-100 371.3 317 59.9
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.4e-100 370.9 348 58.0
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 3.1e-100 369.8 503 42.9
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 4.6e-96 355.9 277 65.0
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 1.0e-95 354.8 460 46.3
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 3.7e-90 336.3 280 58.9
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 7.1e-89 332.0 275 61.1
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 1.2e-83 314.7 470 41.3
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 3.8e-82 309.7 217 68.2
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 5.6e-78 295.8 313 53.7
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 1.2e-77 294.7 534 36.5
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 1.2e-77 294.7 526 35.7
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 2.4e-76 290.4 397 40.6
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 1.5e-75 287.7 330 47.6
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 1.9e-70 270.8 265 52.8
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 1.6e-69 267.7 322 50.9
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 1.9e-65 254.2 323 43.3
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 8.2e-53 212.2 464 36.4
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 3.4e-51 206.8 252 44.4
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 3.5e-48 196.8 256 46.5
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 1.8e-47 194.5 163 57.1
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 8.7e-47 192.2 462 33.8
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 1.9e-41 174.5 194 54.1
Thhalv10022144m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 1.5e-38 164.9 207 44.4
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 7.7e-27 125.9 129 58.9
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 7.7e-27 125.9 134 53.7
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 3.8e-26 123.6 194 44.3
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 9.4e-25 119.0 63 82.5
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 3.0e-23 114.0 60 78.3
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.5e-22 111.7 125 48.0
MCO01G074 Micromonas commoda HOM05D005965 ORTHO05D007283 2.4e-20 104.4 319 26.3
Cre16.g682950 Chlamydomonas reinhardtii HOM05D005965 ORTHO05D007283 3.1e-20 104.0 201 32.8
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 2.6e-19 100.9 204 40.2
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 4.0e-15 87.0 55 67.3
TWI56G1489 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 9.1e-12 75.9 73 53.4
PGSC0003DMG401006600 Solanum tuberosum HOM05D032728 ORTHO05D007283 6.1e-08 63.2 31 83.9
SMO274G0013 Selaginella moellendorffii HOM05D005965 ORTHO05D376736 1.4e-07 62.0 102 42.2


User provided reference genes

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