Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 4.8e-188 661.0 329 100.0
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 3.7e-132 475.3 337 71.8
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 3.5e-130 468.8 340 73.5
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 1.0e-129 467.2 343 69.1
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 9.9e-125 450.7 338 69.2
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 1.1e-120 437.2 343 64.7
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 1.1e-120 437.2 343 65.3
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 5.6e-120 434.9 346 66.5
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 1.1e-118 430.6 339 64.6
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 1.4e-118 430.3 295 70.8
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 1.8e-118 429.9 339 64.3
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 5.2e-118 428.3 335 66.6
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 2.0e-117 426.4 324 67.6
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 2.6e-117 426.0 312 67.3
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 4.4e-117 425.2 310 68.1
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 1.3e-116 423.7 342 62.9
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 2.2e-116 422.9 312 67.0
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 1.1e-115 420.6 353 61.8
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.4e-115 420.2 304 68.1
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 1.9e-115 419.9 340 62.9
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 4.1e-115 418.7 348 62.1
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 7.1e-115 417.9 344 63.4
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 2.1e-114 416.4 344 62.2
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 2.3e-113 412.9 345 60.9
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 3.0e-113 412.5 356 58.7
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 3.0e-113 412.5 298 67.8
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 5.1e-113 411.8 298 69.5
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 8.7e-113 411.0 328 63.4
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 8.7e-113 411.0 354 59.0
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 8.7e-113 411.0 354 59.0
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.1e-112 410.6 306 65.7
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 1.5e-112 410.2 291 69.1
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.5e-112 410.2 298 68.5
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 4.3e-112 408.7 356 60.7
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 5.6e-112 408.3 346 61.3
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 5.6e-112 408.3 357 60.2
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 7.3e-112 407.9 327 64.2
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 7.3e-112 407.9 296 68.9
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 7.3e-112 407.9 333 63.4
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 6.2e-111 404.8 288 68.4
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 6.2e-111 404.8 342 62.0
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.1e-110 404.1 330 63.6
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 1.4e-110 403.7 342 61.4
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 1.4e-110 403.7 338 61.2
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.8e-110 403.3 312 65.4
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 3.1e-110 402.5 368 60.3
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 3.1e-110 402.5 325 61.8
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 4.0e-110 402.1 302 65.9
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 4.0e-110 402.1 340 59.7
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 4.0e-110 402.1 334 62.0
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 5.2e-110 401.7 332 61.4
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 5.2e-110 401.7 339 61.9
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 6.9e-110 401.4 344 59.3
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 9.0e-110 401.0 338 60.9
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.2e-109 400.6 340 61.2
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 1.5e-109 400.2 341 61.0
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 3.4e-109 399.1 342 60.5
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 5.8e-109 398.3 354 61.0
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 1.3e-108 397.1 339 59.0
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.7e-108 396.7 334 60.5
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 3.8e-108 395.6 339 58.7
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 4.9e-108 395.2 334 60.2
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 8.4e-108 394.4 330 61.8
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 1.9e-107 393.3 336 59.5
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 1.2e-106 390.6 347 57.1
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 2.1e-106 389.8 344 58.7
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 1.7e-105 386.7 344 58.1
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 1.7e-105 386.7 347 57.3
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 3.0e-105 386.0 347 57.9
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 1.1e-104 384.0 334 59.0
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 2.8e-103 379.4 215 83.3
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 6.2e-103 378.3 347 57.1
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.1e-102 377.5 310 63.5
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 1.1e-102 377.5 315 63.5
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 3.1e-102 375.9 347 59.1
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 4.0e-102 375.6 346 57.8
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 1.2e-101 374.0 347 58.5
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.5e-101 373.6 282 66.0
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 3.4e-101 372.5 282 66.0
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 7.6e-101 371.3 348 56.9
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 9.9e-101 370.9 346 56.9
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 3.2e-99 365.9 349 57.0
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 3.2e-99 365.9 349 57.0
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 3.2e-99 365.9 370 55.4
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 5.4e-99 365.2 349 56.2
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 7.1e-99 364.8 324 59.9
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 1.6e-98 363.6 345 55.9
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 6.0e-98 361.7 302 61.9
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 5.1e-97 358.6 262 65.6
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 6.7e-97 358.2 351 55.0
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.1e-96 357.5 297 63.3
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 5.3e-94 348.6 321 56.1
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 1.2e-90 337.4 264 64.0
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.2e-90 337.4 249 67.9
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 6.0e-90 335.1 303 54.1
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 5.1e-89 332.0 232 67.7
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 6.2e-87 325.1 359 52.1
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 1.7e-84 317.0 335 49.3
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 2.3e-81 306.6 286 59.4
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 4.1e-70 269.2 226 67.7
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 2.0e-69 266.9 247 58.3
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 7.7e-69 265.0 275 47.6
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 1.9e-67 260.4 346 45.1
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 7.2e-67 258.5 287 45.6
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 6.7e-65 251.9 303 43.6
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 6.7e-65 251.9 384 37.2
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.7e-63 247.3 232 61.2
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 5.0e-60 235.7 253 49.8
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 6.1e-58 228.8 202 59.9
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 1.8e-57 227.3 243 43.6
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 3.0e-57 226.5 307 44.0
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 1.1e-51 208.0 176 64.8
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 7.2e-51 205.3 255 42.7
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 4.8e-47 192.6 295 39.3
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 5.2e-41 172.6 152 56.6
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 5.2e-33 146.0 114 58.8
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 4.3e-19 99.8 149 44.3
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 3.2e-14 83.6 173 37.6
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 1.8e-09 67.8 152 34.9
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 2.3e-09 67.4 33 87.9
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 8.9e-09 65.5 101 40.6
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 9.2e-06 55.5 39 69.2


User provided reference genes

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