Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 0.0e+00 2256.9 1197 100.0
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 2.6e-215 753.4 1210 43.0
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 7.1e-173 612.5 1172 39.5
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 2.7e-148 530.8 1137 36.5
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 5.2e-123 446.8 671 42.8
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 1.0e-102 379.4 788 35.8
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 3.4e-98 364.4 539 41.7
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 4.4e-98 364.0 658 37.4
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 7.8e-95 353.2 569 39.7
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 7.8e-95 353.2 1205 30.2
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 1.3e-94 352.4 1174 29.9
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 2.3e-94 351.7 562 40.4
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 1.9e-93 348.6 555 40.4
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 9.5e-93 346.3 1218 30.8
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 6.2e-92 343.6 650 36.2
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 1.1e-91 342.8 508 40.0
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 1.8e-91 342.0 1157 29.9
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 1.5e-90 339.0 1190 29.8
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 2.2e-89 335.1 522 39.7
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 6.4e-89 333.6 607 35.4
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 3.2e-88 331.3 452 43.4
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 3.2e-88 331.3 1202 30.1
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 7.8e-87 326.6 1170 30.3
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 1.0e-86 326.2 450 42.0
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 3.9e-86 324.3 676 35.7
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 6.6e-86 323.6 1205 28.4
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 1.5e-85 322.4 688 35.5
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 1.5e-85 322.4 603 37.6
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 2.5e-85 321.6 577 37.1
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 2.8e-84 318.2 458 41.3
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 4.7e-84 317.4 666 37.1
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 6.8e-83 313.5 607 35.3
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 6.8e-83 313.5 1210 29.3
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 1.2e-82 312.8 473 40.0
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 4.4e-82 310.8 458 40.2
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 5.8e-82 310.5 1083 28.7
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 7.6e-82 310.1 452 40.7
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.2e-81 308.5 541 35.9
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 2.9e-81 308.1 456 40.6
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 1.1e-80 306.2 428 40.7
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 1.4e-80 305.8 535 37.6
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 2.4e-80 305.1 552 37.3
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 4.1e-80 304.3 756 32.7
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 1.6e-79 302.4 633 34.9
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 2.1e-79 302.0 804 32.0
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.7e-79 301.6 462 39.2
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 3.0e-78 298.1 502 37.8
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 5.1e-78 297.4 788 31.1
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 8.7e-78 296.6 669 32.6
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 8.7e-78 296.6 811 30.8
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 9.6e-77 293.1 539 35.4
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 1.2e-76 292.7 535 37.8
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 2.8e-76 291.6 693 32.3
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 8.1e-76 290.0 653 33.2
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 1.8e-75 288.9 633 33.5
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 9.9e-74 283.1 651 33.0
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 4.9e-73 280.8 629 34.5
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 1.4e-72 279.3 665 31.4
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 3.2e-72 278.1 500 37.0
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 1.2e-71 276.2 394 40.1
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 4.6e-71 274.2 373 39.9
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 1.0e-70 273.1 716 31.1
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 1.5e-69 269.2 541 33.8
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 7.3e-69 266.9 554 33.9
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 1.3e-68 266.2 439 37.4
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 2.1e-68 265.4 509 34.0
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 2.1e-68 265.4 683 31.5
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 1.1e-67 263.1 638 31.8
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 1.4e-67 262.7 379 39.6
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 1.8e-67 262.3 573 33.9
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 1.8e-67 262.3 640 32.0
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 4.0e-67 261.2 634 31.5
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 5.3e-67 260.8 637 32.0
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 7.6e-66 256.9 640 31.7
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 8.4e-65 253.4 647 31.5
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 3.2e-64 251.5 328 40.2
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 2.1e-63 248.8 490 34.7
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 4.3e-61 241.1 454 34.1
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 4.3e-61 241.1 825 29.3
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 4.3e-61 241.1 673 30.5
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 7.4e-61 240.4 372 38.2
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 2.8e-60 238.4 373 38.3
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 3.1e-59 235.0 730 29.2
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 9.0e-59 233.4 684 29.8
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 3.4e-58 231.5 534 30.9
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 4.2e-56 224.6 537 30.5
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 5.5e-56 224.2 537 30.7
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 9.3e-56 223.4 531 31.6
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 1.6e-55 222.6 619 30.7
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 2.7e-55 221.9 664 28.8
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 3.9e-54 218.0 543 28.7
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 6.7e-54 217.2 547 30.3
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 5.6e-53 214.2 363 35.5
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 1.6e-52 212.6 541 30.7
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 2.8e-52 211.8 556 29.5
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 6.2e-52 210.7 629 28.0
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 4.0e-51 208.0 360 35.6
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 1.9e-48 199.1 553 30.0
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 8.7e-46 190.3 181 49.7
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 1.1e-40 173.3 470 28.3
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 4.8e-36 157.9 520 27.3
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 1.1e-35 156.8 181 45.9
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 3.0e-30 138.7 274 32.5
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 2.2e-28 132.5 200 38.0
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 5.3e-27 127.9 201 37.8
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 2.2e-25 122.5 242 30.6
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 3.2e-24 118.6 649 22.5
Atru.chr2.429 Acer truncatum HOM05D006048 ORTHO05D007642 1.8e-22 112.8 200 34.0
CiPaw.07G016800 Carya illinoinensis HOM05D006048 ORTHO05D007642 2.3e-22 112.5 975 25.0
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 4.4e-21 108.2 261 31.4
Lj9A29T9 Lonicera japonica HOM05D006048 ORTHO05D007642 2.6e-18 99.0 323 27.9
Lj9A18T10 Lonicera japonica HOM05D006048 ORTHO05D007642 3.5e-18 98.6 323 28.5
Actinidia01443 Actinidia chinensis HOM05D006048 ORTHO05D007642 2.7e-15 89.0 132 40.2
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 6.7e-14 84.3 182 30.2
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 8.2e-12 77.4 72 50.0
Manes.08G121600 Manihot esculenta HOM05D006048 ORTHO05D007642 1.6e-10 73.2 392 26.8
MBI12_g31451_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 7.2e-08 64.3 99 36.4


User provided reference genes

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