Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold172G38950 Striga asiatica HOM05D002727 ORTHO05D002856 3.8e-123 444.9 231 100.0
SGA_v2.0_scaffold122G33196 Striga asiatica HOM05D002727 ORTHO05D002856 7.8e-76 287.7 227 71.8
SGA_v2.0_scaffold170G38831 Striga asiatica HOM05D002727 ORTHO05D002856 2.8e-65 252.7 256 61.7
SGA_v2.0_scaffold180G39653 Striga asiatica HOM05D000089 ORTHO05D000104 3.4e-55 219.2 206 64.6
SGA_v2.0_scaffold190G40405 Striga asiatica HOM05D002727 ORTHO05D002856 5.2e-48 195.3 152 72.4
SGA_v2.0_scaffold52G19078 Striga asiatica HOM05D002727 ORTHO05D002856 1.7e-43 180.3 114 86.0
SGA_v2.0_scaffold668G53415 Striga asiatica HOM05D002727 ORTHO05D002856 1.1e-34 151.0 218 50.9
Migut.E00413 Erythranthe guttata HOM05D002727 ORTHO05D002856 2.8e-33 146.4 237 43.5
SGA_v2.0_scaffold7G03723 Striga asiatica HOM05D002727 ORTHO05D002856 5.1e-27 125.6 74 85.1
Oeu044348.1 Olea europaea HOM05D002727 ORTHO05D002856 1.3e-25 120.9 255 37.3
SGA_v2.0_scaffold495G52461 Striga asiatica HOM05D002727 ORTHO05D002856 1.6e-25 120.6 77 83.1
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 6.9e-24 115.2 73 82.2
SGA_v2.0_scaffold85G26696 Striga asiatica HOM05D002727 ORTHO05D002856 1.2e-23 114.4 87 75.9
PGSC0003DMG400030506 Solanum tuberosum HOM05D002727 ORTHO05D002856 1.9e-18 97.1 252 35.3
Sopen05g004150 Solanum pennellii HOM05D002727 ORTHO05D002856 7.4e-18 95.1 251 33.9
Solyc05g008320.1 Solanum lycopersicum HOM05D002727 ORTHO05D002856 9.6e-18 94.7 251 33.9
SGA_v2.0_scaffold44G16740 Striga asiatica HOM05D002727 ORTHO05D002856 2.1e-17 93.6 55 87.3
CAN.G185.21 Capsicum annuum HOM05D002727 ORTHO05D002856 4.8e-17 92.4 254 32.3
unitig_27.g25263 Utricularia gibba HOM05D002727 ORTHO05D002856 4.8e-17 92.4 107 47.7
Nitab4.5_0006134g0020 Nicotiana tabacum HOM05D002727 ORTHO05D002856 8.2e-17 91.7 239 33.5
SGA_v2.0_scaffold76G25158 Striga asiatica HOM05D002727 ORTHO05D002856 3.1e-16 89.7 55 85.5
Peaxi162Scf00205g00023 Petunia axillaris HOM05D002727 ORTHO05D002856 5.1e-11 72.4 253 30.0
Lsat_1_v5_gn_8_43200 Lactuca sativa HOM05D002727 ORTHO05D002856 1.9e-10 70.5 108 38.9
vmacro10627 Vaccinium macrocarpon HOM05D002727 ORTHO05D002856 9.7e-10 68.2 114 37.7
Hma1.2p1_0951F.1_g240760 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 1.6e-09 67.4 115 37.4
Hma1.2p1_2764F.1_g328145 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 1.6e-09 67.4 115 37.4
TAR622G1289 Trochodendron aralioides HOM05D002727 ORTHO05D002856 2.2e-09 67.0 115 36.5
ECA232G4731 Erigeron canadensis HOM05D002727 ORTHO05D002856 4.8e-09 65.9 113 37.2
HanXRQChr08g0212641 Helianthus annuus HOM05D002727 ORTHO05D002856 4.8e-09 65.9 110 38.2
Lsat_1_v5_gn_3_54560 Lactuca sativa HOM05D002727 ORTHO05D002856 8.2e-09 65.1 105 36.2
ECA233G4969 Erigeron canadensis HOM05D002727 ORTHO05D002856 1.4e-08 64.3 110 40.0
unitig_26.g9074 Utricularia gibba HOM05D002727 ORTHO05D002856 1.4e-08 64.3 63 55.6
Actinidia36683 Actinidia chinensis HOM05D002727 ORTHO05D002856 2.4e-08 63.5 115 34.8
arahy.Tifrunner.gnm1.ann1.E5JI7C Arachis hypogaea HOM05D002727 ORTHO05D002856 2.4e-08 63.5 111 36.0
arahy.Tifrunner.gnm1.ann1.NZR7KS Arachis hypogaea HOM05D002727 ORTHO05D002856 2.4e-08 63.5 111 36.0
Medtr1g108470 Medicago truncatula HOM05D002727 ORTHO05D002856 2.4e-08 63.5 110 37.3
EL10Ac6g14255 Beta vulgaris HOM05D002727 ORTHO05D002856 3.1e-08 63.2 111 40.5
Actinidia15249 Actinidia chinensis HOM05D002727 ORTHO05D002856 4.1e-08 62.8 159 32.7
AUR62039553 Chenopodium quinoa HOM05D002727 ORTHO05D002856 4.1e-08 62.8 111 36.9
Dinv05150 Davidia involucrata HOM05D002727 ORTHO05D002856 5.3e-08 62.4 250 24.4
CSS0022209 Camellia sinensis var. sinensis HOM05D002727 ORTHO05D002856 6.9e-08 62.0 119 32.8
Hma1.2p1_0114F.1_g055280 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 1.2e-07 61.2 186 28.0
MD16G1031100 Malus domestica HOM05D002727 ORTHO05D002856 1.2e-07 61.2 120 35.0
MELO3C012299.2 Cucumis melo HOM05D002727 ORTHO05D002856 3.4e-07 59.7 137 32.1
Psat6g221920 Pisum sativum HOM05D002727 ORTHO05D002856 4.5e-07 59.3 112 33.9
Lalb_Chr17g0338701 Lupinus albus HOM05D002727 ORTHO05D002856 5.9e-07 58.9 125 33.6
Lalb_Chr21g0308511 Lupinus albus HOM05D002727 ORTHO05D002856 5.9e-07 58.9 103 33.0
TPR.G4843 Trifolium pratense HOM05D002727 ORTHO05D002856 5.9e-07 58.9 105 35.2
PSO478G1911 Papaver somniferum HOM05D002727 ORTHO05D002856 7.7e-07 58.5 119 34.5
CsaV3_5G034890 Cucumis sativus L. HOM05D002727 ORTHO05D002856 1.0e-06 58.2 137 32.1
QL01p002288 Quercus lobata HOM05D002727 ORTHO05D002856 1.0e-06 58.2 107 34.6
VMungo0720G0381 Vigna mungo HOM05D002727 ORTHO05D002856 1.0e-06 58.2 154 32.5
Ciclev10017676m.g Citrus clementina HOM05D002727 ORTHO05D002856 1.3e-06 57.8 110 35.5
FAN06G1995 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.3e-06 57.8 112 35.7
HanXRQChr15g0488631 Helianthus annuus HOM05D002727 ORTHO05D002856 1.3e-06 57.8 112 35.7
VMungo0720G2475 Vigna mungo HOM05D002727 ORTHO05D002856 1.7e-06 57.4 111 36.0
Duzib251G0433 Durio zibethinus HOM05D002727 ORTHO05D002856 2.2e-06 57.0 110 35.5
Sabra08G0096800 Salix brachista HOM05D002727 ORTHO05D002856 2.2e-06 57.0 107 30.8
CDE04G0093 Ceratophyllum demersum HOM05D002727 ORTHO05D002856 2.9e-06 56.6 111 36.0
DCAR_007283 Daucus carota HOM05D002727 ORTHO05D002856 2.9e-06 56.6 115 33.0
FvH4_7g12190 Fragaria vesca HOM05D002727 ORTHO05D002856 2.9e-06 56.6 112 34.8
FAN06G2836 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.9e-06 56.6 112 34.8
FAN20G2548 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.9e-06 56.6 116 34.5
Ca_24568_v3 Cicer arietinum L. HOM05D002727 ORTHO05D002856 3.8e-06 56.2 114 30.7
DCAR_023615 Daucus carota HOM05D002727 ORTHO05D002856 3.8e-06 56.2 117 29.9
FAN15G1981 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.8e-06 56.2 116 35.3
Medtr5g044170 Medicago truncatula HOM05D002727 ORTHO05D002856 3.8e-06 56.2 116 31.9
SGA_v2.0_scaffold10G05490 Striga asiatica HOM05D002727 ORTHO05D002856 3.8e-06 56.2 35 85.7
FvH4_2g32760 Fragaria vesca HOM05D002727 ORTHO05D002856 5.0e-06 55.8 116 34.5
FAN24G3357 Fragaria x ananassa HOM05D002727 ORTHO05D002856 5.0e-06 55.8 116 34.5
PSO017G6820 Papaver somniferum HOM05D002727 ORTHO05D002856 5.0e-06 55.8 119 33.6
PSO478G1097 Papaver somniferum HOM05D002727 ORTHO05D002856 5.0e-06 55.8 119 33.6
Ah.02g128090 Amaranthus hybridus HOM05D002727 ORTHO05D002856 6.5e-06 55.5 107 32.7
Dinv16190 Davidia involucrata HOM05D002727 ORTHO05D002856 6.5e-06 55.5 116 32.8
FAN03G1798 Fragaria x ananassa HOM05D002727 ORTHO05D002856 6.5e-06 55.5 116 32.8
Glyma.10G265700 Glycine max HOM05D002727 ORTHO05D002856 6.5e-06 55.5 111 33.3
Glyma.20G124900 Glycine max HOM05D002727 ORTHO05D002856 6.5e-06 55.5 111 34.2
FAN27G2751 Fragaria x ananassa HOM05D002727 ORTHO05D002856 8.5e-06 55.1 116 33.6
Lj5g0017764 Lotus japonicus HOM05D002727 ORTHO05D002856 8.5e-06 55.1 153 32.0
Phvul.007G037300 Phaseolus vulgaris HOM05D002727 ORTHO05D002856 8.5e-06 55.1 151 29.1
Potri.008G128200 Populus trichocarpa HOM05D002727 ORTHO05D002856 8.5e-06 55.1 107 29.0
Thecc.02G278300 Theobroma cacao HOM05D002727 ORTHO05D002856 8.5e-06 55.1 108 33.3


User provided reference genes

Program Settings