Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 2.4e-265 918.3 468 100.0
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 1.1e-174 617.1 494 68.4
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 1.1e-172 610.5 494 67.6
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 4.2e-161 572.0 444 68.5
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 1.3e-159 567.0 488 62.3
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 1.1e-158 563.9 489 61.6
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 1.9e-158 563.1 488 61.9
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 2.8e-157 559.3 488 60.9
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 3.7e-157 558.9 494 60.7
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 4.8e-157 558.5 488 60.9
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 1.1e-156 557.4 488 60.7
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 1.8e-156 556.6 488 61.1
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 2.4e-156 556.2 487 61.4
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 2.4e-156 556.2 488 60.5
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 3.1e-156 555.8 488 60.2
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 2.0e-155 553.1 488 60.0
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 7.6e-155 551.2 487 60.4
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 1.0e-154 550.8 488 60.7
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 1.3e-154 550.4 491 60.1
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 3.8e-154 548.9 488 60.2
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 6.4e-154 548.1 494 59.5
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 1.4e-153 547.0 488 60.2
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 1.4e-153 547.0 490 60.0
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 1.9e-153 546.6 488 59.8
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 4.2e-153 545.4 488 59.8
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 1.2e-152 543.9 488 59.4
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 2.1e-152 543.1 490 59.2
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 2.7e-152 542.7 488 59.4
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 6.0e-152 541.6 488 59.2
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 7.9e-152 541.2 486 59.9
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 1.3e-151 540.4 477 59.7
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 1.8e-151 540.0 488 59.4
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 1.8e-151 540.0 489 59.3
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 1.8e-151 540.0 488 58.8
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.3e-151 539.7 488 59.6
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 3.0e-151 539.3 489 59.3
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 3.0e-151 539.3 488 60.2
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 3.0e-151 539.3 488 58.4
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 3.9e-151 538.9 473 60.7
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 5.1e-151 538.5 488 59.0
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 1.5e-150 537.0 488 58.8
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 1.5e-150 537.0 488 58.8
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 1.9e-150 536.6 488 58.0
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 3.3e-150 535.8 488 57.8
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 4.3e-150 535.4 488 59.4
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 7.4e-150 534.6 488 60.0
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 1.3e-149 533.9 494 58.1
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 1.6e-149 533.5 494 58.5
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 2.8e-149 532.7 488 58.6
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 3.7e-149 532.3 488 57.0
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 1.1e-148 530.8 488 59.0
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 1.8e-148 530.0 489 58.1
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 1.8e-148 530.0 488 58.2
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 4.0e-148 528.9 494 59.1
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 1.5e-147 526.9 488 58.4
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 1.5e-147 526.9 487 59.3
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 2.0e-147 526.6 488 55.5
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 2.6e-147 526.2 488 58.6
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 7.6e-147 524.6 488 57.8
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 1.7e-146 523.5 487 57.5
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 4.9e-146 521.9 488 56.1
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 1.3e-143 513.8 490 56.5
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 1.8e-143 513.5 488 55.9
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 2.3e-143 513.1 487 56.3
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 5.1e-143 511.9 489 55.0
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 6.7e-143 511.5 488 56.4
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 1.1e-142 510.8 489 55.0
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 1.1e-142 510.8 488 55.9
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 3.3e-142 509.2 487 55.4
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 7.4e-142 508.1 500 54.6
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 2.8e-141 506.1 496 54.2
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 1.4e-140 503.8 489 53.8
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 1.8e-140 503.4 489 54.2
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 1.8e-140 503.4 489 54.4
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 2.4e-140 503.1 489 54.4
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 9.0e-140 501.1 502 52.8
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 1.2e-139 500.7 517 54.0
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 1.5e-139 500.4 489 54.6
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 2.6e-139 499.6 488 53.5
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 5.9e-139 498.4 464 58.6
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 5.0e-138 495.4 487 54.2
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 3.6e-136 489.2 461 57.3
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 5.1e-135 485.3 488 54.7
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 3.3e-134 482.6 490 53.9
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 7.4e-134 481.5 488 55.3
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 8.2e-133 478.0 466 55.4
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 1.8e-132 476.9 489 52.8
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 6.9e-132 474.9 489 52.6
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 3.4e-131 472.6 498 53.6
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 5.5e-129 465.3 471 52.9
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 2.7e-128 463.0 466 52.4
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 1.7e-125 453.8 420 61.7
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 3.7e-125 452.6 504 51.8
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 1.4e-124 450.7 488 50.2
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 1.0e-122 444.5 494 49.6
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 2.5e-121 439.9 382 57.6
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 2.7e-120 436.4 487 48.7
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 3.6e-120 436.0 489 48.3
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 1.2e-112 411.0 361 58.4
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.8e-109 399.8 312 63.8
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 1.8e-103 380.6 415 52.0
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 3.5e-99 366.3 355 57.5
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 3.8e-98 362.8 487 39.8
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.2e-96 357.8 490 40.4
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.5e-94 350.9 490 39.6
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 2.9e-93 346.7 497 39.8
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 2.7e-91 340.1 485 39.2
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 1.0e-90 338.2 488 39.5
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 3.2e-84 316.6 487 36.6
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 3.3e-49 200.3 134 72.4
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 7.3e-49 199.1 500 29.0
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 4.8e-48 196.4 137 67.2
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 8.7e-42 175.6 114 78.1
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 4.8e-40 169.9 470 26.6
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 1.0e-37 162.2 431 32.0
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 1.1e-36 158.7 193 45.1
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 1.6e-27 128.3 92 65.2
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 7.9e-27 125.9 94 69.1
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 1.7e-21 108.2 195 34.4
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 7.2e-20 102.8 220 31.8
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 2.3e-18 97.8 85 62.4
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 6.7e-18 96.3 423 24.3
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 4.3e-17 93.6 58 79.3
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 9.7e-17 92.4 57 77.2
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 4.8e-16 90.1 173 35.8
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 1.1e-07 62.4 98 41.8
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 1.1e-07 62.4 40 70.0


User provided reference genes

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