Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold171G38887 Striga asiatica HOM05D006454 ORTHO05D008024 2.6e-193 679.1 511 100.0
Migut.M01675 Erythranthe guttata HOM05D006454 ORTHO05D008024 2.5e-103 380.2 520 66.7
SalBow8G0989 Salvia bowleyana HOM05D006454 ORTHO05D008024 1.4e-101 374.4 518 68.3
MSTRG.6985 Avicennia marina HOM05D006454 ORTHO05D008024 1.0e-96 358.2 532 69.0
Oeu054328.1 Olea europaea HOM05D006454 ORTHO05D008024 3.4e-84 316.6 485 69.3
Prupe.4G234400 Prunus persica HOM05D006454 ORTHO05D008024 1.6e-73 281.2 487 63.2
Nitab4.5_0000163g0310 Nicotiana tabacum HOM05D006454 ORTHO05D008024 8.8e-72 275.4 477 62.3
Cc05_g14700 Coffea canephora HOM05D006454 ORTHO05D008024 1.5e-71 274.6 506 61.1
MELO3C024909.2 Cucumis melo HOM05D006454 ORTHO05D008024 2.0e-71 274.2 488 58.4
TAR626G0559 Trochodendron aralioides HOM05D006454 ORTHO05D008024 2.0e-71 274.2 495 60.2
Actinidia05032 Actinidia chinensis HOM05D006454 ORTHO05D008024 2.6e-71 273.9 519 61.7
MD11G1204700 Malus domestica HOM05D006454 ORTHO05D008024 5.7e-71 272.7 519 58.2
Gohir.A13G134866 Gossypium hirsutum HOM05D006454 ORTHO05D008024 2.8e-70 270.4 482 63.1
FvH4_3g24060 Fragaria vesca HOM05D006454 ORTHO05D008024 6.3e-70 269.2 482 61.0
FAN11G0689 Fragaria x ananassa HOM05D006454 ORTHO05D008024 6.3e-70 269.2 482 61.0
Gorai.013G155100 Gossypium raimondii HOM05D006454 ORTHO05D008024 8.2e-70 268.9 482 62.9
FAN25G3289 Fragaria x ananassa HOM05D006454 ORTHO05D008024 5.3e-69 266.2 485 60.2
CANSAT11G2145 Cannabis sativa HOM05D006454 ORTHO05D008024 7.0e-69 265.8 494 60.3
FAN25G1123 Fragaria x ananassa HOM05D006454 ORTHO05D008024 1.2e-68 265.0 484 59.9
Gohir.D13G138500 Gossypium hirsutum HOM05D006454 ORTHO05D008024 1.2e-68 265.0 482 62.4
MBI16_g11566_MAGBIO Magnolia biondii HOM05D006454 ORTHO05D008024 3.5e-68 263.5 487 60.2
FAN21G2064 Fragaria x ananassa HOM05D006454 ORTHO05D008024 5.9e-68 262.7 481 58.6
Thecc.07G022300 Theobroma cacao HOM05D006454 ORTHO05D008024 1.3e-67 261.5 479 59.7
Haze_09788 Corylus avellana HOM05D006454 ORTHO05D008024 1.9e-66 257.7 475 58.9
THA.LOC104813444 Tarenaya hassleriana HOM05D006454 ORTHO05D008024 1.9e-66 257.7 491 59.5
Solyc12g015640.2 Solanum lycopersicum HOM05D006454 ORTHO05D008024 2.5e-66 257.3 471 61.6
QL08p005504 Quercus lobata HOM05D006454 ORTHO05D008024 4.2e-66 256.5 519 53.6
RcHm_v2.0_Chr5g0042641 Rosa chinensis HOM05D006454 ORTHO05D008024 4.2e-66 256.5 485 59.6
Nitab4.5_0002517g0040 Nicotiana tabacum HOM05D006454 ORTHO05D008024 5.5e-66 256.1 479 63.0
Cfa020229 Carpinus fangiana HOM05D006454 ORTHO05D008024 7.2e-66 255.8 475 59.2
Sed0021870 Sechium edule HOM05D006454 ORTHO05D008024 1.2e-65 255.0 511 57.1
CSS0002313 Camellia sinensis var. sinensis HOM05D006454 ORTHO05D000036 2.7e-65 253.8 424 61.1
Lj1A885G30 Lonicera japonica HOM05D006454 ORTHO05D008024 1.8e-64 251.1 422 65.4
MD03G1188700 Malus domestica HOM05D006454 ORTHO05D008024 2.3e-64 250.8 493 61.9
ECA246G2030 Erigeron canadensis HOM05D006454 ORTHO05D008024 4.0e-64 250.0 475 55.4
CAN.G1239.14 Capsicum annuum HOM05D006454 ORTHO05D008024 6.8e-64 249.2 489 59.9
Manes.15G063200 Manihot esculenta HOM05D006454 ORTHO05D008024 3.4e-63 246.9 501 59.9
Peaxi162Scf00955g00214 Petunia axillaris HOM05D006454 ORTHO05D008024 3.4e-63 246.9 513 58.7
Aqoxy4G02215 Aquilegia oxysepala HOM05D006454 ORTHO05D008024 1.3e-62 245.0 504 58.5
Sopen12g007540 Solanum pennellii HOM05D006454 ORTHO05D008024 2.8e-62 243.8 474 59.9
Lalb_Chr04g0247971 Lupinus albus HOM05D006454 ORTHO05D008024 3.1e-61 240.4 480 57.1
Phvul.008G275700 Phaseolus vulgaris HOM05D006454 ORTHO05D008024 3.1e-61 240.4 489 56.6
CsaV3_7G018450 Cucumis sativus L. HOM05D006454 ORTHO05D008024 7.0e-61 239.2 487 58.5
Glyma.14G015800 Glycine max HOM05D006454 ORTHO05D008024 9.1e-61 238.8 487 58.9
Sp6g17500 Schrenkiella parvula HOM05D006454 ORTHO05D008024 1.2e-60 238.4 502 53.4
Atru.chr2.3605 Acer truncatum HOM05D006454 ORTHO05D008024 1.6e-60 238.0 495 58.8
CiPaw.11G201000 Carya illinoinensis HOM05D006454 ORTHO05D008024 2.0e-60 237.7 373 69.7
ClCG09G021120 Citrullus lanatus HOM05D006454 ORTHO05D008024 3.5e-60 236.9 488 58.6
arahy.Tifrunner.gnm1.ann1.AYWF3K Arachis hypogaea HOM05D006454 ORTHO05D008024 7.7e-60 235.7 470 59.8
Lsat_1_v5_gn_5_8060 Lactuca sativa HOM05D006454 ORTHO05D008024 1.0e-59 235.3 515 57.7
Ciclev10008511m.g Citrus clementina HOM05D006454 ORTHO05D008024 2.3e-59 234.2 487 59.5
DCAR_013215 Daucus carota HOM05D006454 ORTHO05D008024 2.9e-59 233.8 341 70.7
VMungo0647G1066 Vigna mungo HOM05D006454 ORTHO05D008024 2.9e-59 233.8 483 59.6
Carub.0008s1595 Capsella rubella HOM05D006454 ORTHO05D008024 3.8e-59 233.4 502 54.8
CDE12G0728 Ceratophyllum demersum HOM05D006454 ORTHO05D008024 5.0e-59 233.0 325 73.5
arahy.Tifrunner.gnm1.ann1.IBL7LR Arachis hypogaea HOM05D006454 ORTHO05D008024 6.5e-59 232.6 468 59.8
BolC3t14060H Brassica oleracea HOM05D006454 ORTHO05D008024 1.9e-58 231.1 499 53.5
Aa31LG3G11530 Aethionema arabicum HOM05D006454 ORTHO05D008024 2.5e-58 230.7 473 55.4
C03p16380 Brassica napus HOM05D006454 ORTHO05D008024 2.5e-58 230.7 492 54.1
BcaC01g06383 Brassica carinata HOM05D006454 ORTHO05D008024 3.3e-58 230.3 492 54.1
PSO675G2716 Papaver somniferum HOM05D006454 ORTHO05D008024 7.2e-58 229.2 482 57.7
vmacro11560 Vaccinium macrocarpon HOM05D006454 ORTHO05D008024 1.2e-57 228.4 425 61.4
Ca_06374_v3 Cicer arietinum L. HOM05D006454 ORTHO05D000136 1.6e-57 228.0 362 67.1
AL8G31150 Arabidopsis lyrata HOM05D006454 ORTHO05D008024 2.8e-57 227.3 502 53.8
Medtr5g094610 Medicago truncatula HOM05D006454 ORTHO05D008024 2.8e-57 227.3 517 53.0
BcaB01g04358 Brassica carinata HOM05D006454 ORTHO05D008024 1.0e-56 225.3 505 52.9
Rhsim06G0226800 Rhododendron simsii HOM05D006454 ORTHO05D008024 2.3e-56 224.2 539 52.3
Sabra11G0073300 Salix brachista HOM05D006454 ORTHO05D008024 3.0e-56 223.8 514 58.2
HanXRQChr08g0235811 Helianthus annuus HOM05D006454 ORTHO05D008024 4.0e-56 223.4 480 52.9
Potri.001G361800 Populus trichocarpa HOM05D006454 ORTHO05D008024 5.2e-56 223.0 472 60.8
Sabra11G0078800 Salix brachista HOM05D006454 ORTHO05D008024 5.2e-56 223.0 481 59.3
TWI39G0040 Tripterygium wilfordii HOM05D006454 ORTHO05D008024 5.2e-56 223.0 535 58.1
BraA03t10695Z Brassica rapa HOM05D006454 ORTHO05D008024 8.9e-56 222.2 504 53.0
A03p13940 Brassica napus HOM05D006454 ORTHO05D008024 1.2e-55 221.9 504 53.0
ATR1149G086 Amborella trichopoda HOM05D006454 ORTHO05D008024 2.0e-55 221.1 518 54.2
Eucgr.F03524 Eucalyptus grandis HOM05D006454 ORTHO05D008024 4.4e-55 219.9 473 59.0
Thhalv10013311m.g Eutrema salsugineum HOM05D006454 ORTHO05D008024 2.2e-54 217.6 503 41.6
PSO541G2941 Papaver somniferum HOM05D006454 ORTHO05D008024 6.3e-54 216.1 480 57.1
Glyma.02G297900 Glycine max HOM05D006454 ORTHO05D008024 1.8e-53 214.5 478 58.8
LjContig00272g0005215 Lotus japonicus HOM05D006454 ORTHO05D008024 3.1e-53 213.8 482 55.8
AT5G55580 Arabidopsis thaliana HOM05D006454 ORTHO05D008024 4.1e-53 213.4 507 52.9
CARHR268890 Cardamine hirsuta HOM05D006454 ORTHO05D008024 2.7e-52 210.7 373 64.3
Dinv40835 Davidia involucrata HOM05D006454 ORTHO05D008024 7.8e-52 209.1 293 76.5
Oeu031063.1 Olea europaea HOM05D006454 ORTHO05D008024 1.5e-50 204.9 293 86.0
AUR62040658 Chenopodium quinoa HOM05D006454 ORTHO05D008024 2.5e-50 204.1 489 53.6
TPR.G14154 Trifolium pratense HOM05D006454 ORTHO05D008024 2.5e-50 204.1 479 54.3
Actinidia00093 Actinidia chinensis HOM05D006454 ORTHO05D008024 5.6e-50 203.0 415 65.5
EL10Ac4g07613 Beta vulgaris HOM05D006454 ORTHO05D008024 1.6e-49 201.4 349 69.9
Psat2g008800 Pisum sativum HOM05D006454 ORTHO05D008024 4.7e-49 199.9 471 57.1
Ah.04g166440 Amaranthus hybridus HOM05D006454 ORTHO05D008024 1.0e-48 198.7 490 56.1
AUR62017060 Chenopodium quinoa HOM05D006454 ORTHO05D008024 1.4e-48 198.4 469 56.7
GSVIVG01037780001 Vitis vinifera HOM05D006454 ORTHO05D008024 4.9e-46 189.9 417 59.2
CiPaw.12G136000 Carya illinoinensis HOM05D006454 ORTHO05D008024 1.2e-44 185.3 494 49.6
HPP92_007883 Vanilla planifolia HOM05D006454 ORTHO05D008024 4.6e-44 183.3 510 54.1
COL.COLO4_09787 Corchorus olitorius HOM05D006454 ORTHO05D008024 8.6e-43 179.1 478 55.4
PGSC0003DMG401029813 Solanum tuberosum HOM05D006454 ORTHO05D008024 1.9e-42 177.9 293 75.4
PGR031G1939 Punica granatum HOM05D006454 ORTHO05D008024 1.3e-38 165.2 523 49.1
CAN.G489.2 Capsicum annuum HOM05D006454 ORTHO05D008024 1.4e-37 161.8 292 52.7
Hund01917 Selenicereus undatus HOM05D006454 ORTHO05D008024 1.1e-34 152.1 360 61.4
Cpa.g.sc12.193 Carica papaya HOM05D006454 ORTHO05D008024 4.3e-34 150.2 247 41.7
Os07g0583200 Oryza sativa ssp. japonica HOM05D006454 ORTHO05D008024 2.9e-30 137.5 383 57.2
HPP92_007898 Vanilla planifolia HOM05D006454 ORTHO05D008024 1.9e-29 134.8 285 72.6
Sc16g0003560 Simmondsia chinensis HOM05D006454 ORTHO05D008024 3.2e-29 134.0 291 45.4
Nn1g07440 Nelumbo nucifera HOM05D006454 ORTHO05D008024 5.4e-29 133.3 94 84.0
unitig_899.g15274 Utricularia gibba HOM05D006454 ORTHO05D008024 2.1e-28 131.3 95 71.6
Cpa.g.sc12.192 Carica papaya HOM05D006454 ORTHO05D008024 2.7e-28 131.0 120 68.3
Prupe.4G234100 Prunus persica HOM05D006454 ORTHO05D008024 1.7e-27 128.3 90 70.0
Zm00001eb107900 Zea mays HOM05D006454 ORTHO05D008024 1.7e-27 128.3 479 51.8
Hund01916 Selenicereus undatus HOM05D006454 ORTHO05D008024 1.4e-21 108.6 478 26.4
BcaNung06723 Brassica carinata HOM05D000081 ORTHO05D008024 4.3e-18 97.1 345 35.7
Pp3c7_3780 Physcomitrium patens HOM05D006454 ORTHO05D008024 1.6e-17 95.1 351 58.4
BolC2t07758H Brassica oleracea HOM05D006454 ORTHO05D008024 2.0e-15 88.2 138 42.0
Mapoly0042s0040 Marchantia polymorpha HOM05D006454 ORTHO05D008024 4.9e-14 83.6 340 54.7
BcaNung06724 Brassica carinata HOM05D006454 ORTHO05D008024 8.4e-14 82.8 54 68.5
Pp3c11_22990 Physcomitrium patens HOM05D006454 ORTHO05D008024 3.2e-13 80.9 369 52.8
SEGI_11937 Sequoiadendron giganteum HOM05D047912 ORTHO05D008024 2.1e-12 78.2 326 54.6
Oeu034554.1 Olea europaea HOM05D006454 ORTHO05D008024 6.2e-09 66.6 93 44.1
vmacro10144 Vaccinium macrocarpon HOM05D006454 ORTHO05D008024 1.5e-07 62.0 84 42.9


User provided reference genes

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