Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold171G38860 Striga asiatica HOM05D005863 ORTHO05D003355 1.7e-174 615.9 313 100.0
Migut.A01086 Erythranthe guttata HOM05D005863 ORTHO05D003355 4.6e-39 166.0 302 41.7
Hma1.2p1_2829F.1_g329210 Hydrangea macrophylla HOM05D005863 ORTHO05D003355 1.5e-37 161.0 377 33.2
SalBow8G3261 Salvia bowleyana HOM05D005863 ORTHO05D003355 6.2e-36 155.6 326 38.3
SalBow6G1550 Salvia bowleyana HOM05D005863 ORTHO05D003355 8.1e-36 155.2 315 39.7
Actinidia37152 Actinidia chinensis HOM05D005863 ORTHO05D003355 3.1e-35 153.3 355 33.5
Rhsim04G0012300 Rhododendron simsii HOM05D005863 ORTHO05D003355 1.0e-30 138.3 370 30.5
GSVIVG01014696001 Vitis vinifera HOM05D005863 ORTHO05D003355 1.8e-30 137.5 381 30.4
CSS0034444 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D001683 1.9e-29 134.0 237 35.4
CiPaw.12G138700 Carya illinoinensis HOM05D014719 ORTHO05D003355 7.4e-29 132.1 352 32.4
vmacro09646 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 8.2e-28 128.6 371 29.6
Nitab4.5_0001159g0240 Nicotiana tabacum HOM05D005863 ORTHO05D003355 2.6e-26 123.6 371 29.6
Prupe.8G267500 Prunus persica HOM05D014719 ORTHO05D003355 4.5e-26 122.9 315 34.6
QL08p003943 Quercus lobata HOM05D014719 ORTHO05D003355 1.3e-25 121.3 94 57.4
Cpa.g.sc12.119 Carica papaya HOM05D005863 ORTHO05D003355 2.2e-25 120.6 97 57.7
HanXRQChr11g0334111 Helianthus annuus HOM05D005863 ORTHO05D003355 1.9e-24 117.5 307 31.3
Nitab4.5_0006876g0020 Nicotiana tabacum HOM05D005863 ORTHO05D003355 4.2e-24 116.3 371 28.0
Lsat_1_v5_gn_7_114301 Lactuca sativa HOM05D005863 ORTHO05D003355 9.3e-24 115.2 302 29.8
Cc05_g15010 Coffea canephora HOM05D005863 ORTHO05D003355 1.0e-22 111.7 333 29.1
TAR629G0397 Trochodendron aralioides HOM05D005863 ORTHO05D003355 2.3e-22 110.5 89 57.3
Sc16g0008130 Simmondsia chinensis HOM05D005863 ORTHO05D003355 1.9e-21 107.5 345 29.0
MBI14_g22553_MAGBIO Magnolia biondii HOM05D005863 ORTHO05D003355 3.3e-21 106.7 119 46.2
PGR031G0790 Punica granatum HOM05D005863 ORTHO05D003355 3.3e-21 106.7 305 34.1
RcHm_v2.0_Chr3g0496661 Rosa chinensis HOM05D014719 ORTHO05D003355 3.3e-21 106.7 346 30.9
Thecc.07G012300 Theobroma cacao HOM05D005863 ORTHO05D003355 1.3e-20 104.8 320 30.6
Ciclev10008896m.g Citrus clementina HOM05D005863 ORTHO05D003355 1.6e-20 104.4 331 29.9
EL10Ac4g07554 Beta vulgaris HOM05D038882 ORTHO05D003355 2.8e-20 103.6 327 30.0
CARHR045560 Cardamine hirsuta HOM05D000747 ORTHO05D001683 6.3e-20 102.4 133 42.1
ClCG09G021400 Citrullus lanatus HOM05D031146 ORTHO05D003355 6.3e-20 102.4 374 27.0
Atru.chr2.3697 Acer truncatum HOM05D005863 ORTHO05D003355 1.1e-19 101.7 318 28.6
TWI38G1195 Tripterygium wilfordii HOM05D005863 ORTHO05D003355 1.1e-19 101.7 339 28.9
Gorai.013G152000 Gossypium raimondii HOM05D005863 ORTHO05D003355 1.4e-19 101.3 87 54.0
Dinv10342 Davidia involucrata HOM05D005863 ORTHO05D003355 1.8e-19 100.9 313 31.0
Gohir.D13G135600 Gossypium hirsutum HOM05D005863 ORTHO05D003355 5.3e-19 99.4 79 57.0
CANSAT78G1634 Cannabis sativa HOM05D005863 ORTHO05D003355 6.9e-19 99.0 336 27.1
Potri.007G102500 Populus trichocarpa HOM05D005863 ORTHO05D003355 9.0e-19 98.6 141 39.7
Gohir.A13G132200 Gossypium hirsutum HOM05D005863 ORTHO05D003355 1.2e-18 98.2 87 52.9
C06p16270 Brassica napus HOM05D012516 ORTHO05D003355 1.5e-18 97.8 81 58.0
BolC6t36826H Brassica oleracea HOM05D012516 ORTHO05D003355 1.5e-18 97.8 81 58.0
Carub.0001s4444 Capsella rubella HOM05D012516 ORTHO05D003355 2.0e-18 97.4 138 38.4
Thhalv10011171m.g Eutrema salsugineum HOM05D000747 ORTHO05D001683 2.0e-18 97.4 80 55.0
Nn1g07525 Nelumbo nucifera HOM05D005863 ORTHO05D003355 2.0e-18 97.4 256 28.1
Sabra07G0084200 Salix brachista HOM05D005863 ORTHO05D003355 2.0e-18 97.4 135 39.3
AL1G63990 Arabidopsis lyrata HOM05D012516 ORTHO05D003355 2.6e-18 97.1 143 38.5
Glyma.15G157900 Glycine max HOM05D005863 ORTHO05D003355 4.5e-18 96.3 89 52.8
Lalb_Chr18g0052131 Lupinus albus HOM05D005863 ORTHO05D003355 5.9e-18 95.9 323 29.7
Sp1g41465 Schrenkiella parvula HOM05D012516 ORTHO05D003355 7.7e-18 95.5 80 50.0
BcaC08g44222 Brassica carinata HOM05D012516 ORTHO05D003355 1.3e-17 94.7 81 56.8
AT1G55865 Arabidopsis thaliana HOM05D012516 ORTHO05D003355 1.7e-17 94.4 80 53.8
CsaV3_7G011440 Cucumis sativus L. HOM05D031146 ORTHO05D003355 1.7e-17 94.4 352 26.4
BraA05t20625Z Brassica rapa HOM05D012516 ORTHO05D003355 2.9e-17 93.6 87 51.7
Peaxi162Scf01762g00013 Petunia axillaris HOM05D005863 ORTHO05D003355 2.9e-17 93.6 180 35.0
VMungo1309G2065 Vigna mungo HOM05D001598 ORTHO05D002757 2.9e-17 93.6 81 51.9
Eucgr.F03684 Eucalyptus grandis HOM05D005863 ORTHO05D003355 5.0e-17 92.8 350 27.1
arahy.Tifrunner.gnm1.ann1.11ED70 Arachis hypogaea HOM05D005863 ORTHO05D003355 6.5e-17 92.4 337 26.1
BcaB02g10795 Brassica carinata HOM05D012516 ORTHO05D003355 6.5e-17 92.4 81 53.1
Lj6g0020676 Lotus japonicus HOM05D005863 ORTHO05D003355 8.5e-17 92.0 86 47.7
A05p17260 Brassica napus HOM05D012516 ORTHO05D003355 1.1e-16 91.7 86 51.2
Glyma.09G051600 Glycine max HOM05D005863 ORTHO05D003355 2.5e-16 90.5 310 29.0
Psat1g149600 Pisum sativum HOM05D005863 ORTHO05D003355 2.5e-16 90.5 356 27.2
Sed0025324 Sechium edule HOM05D031146 ORTHO05D003355 2.5e-16 90.5 348 25.6
THA.LOC104822728 Tarenaya hassleriana HOM05D012516 ORTHO05D003355 3.2e-16 90.1 85 50.6
PSO339G2613 Papaver somniferum HOM05D005863 ORTHO05D003355 4.2e-16 89.7 83 48.2
PSO384G3490 Papaver somniferum HOM05D005863 ORTHO05D003355 1.2e-15 88.2 83 47.0
HPP92_027528 Vanilla planifolia HOM05D005863 ORTHO05D003355 1.8e-14 84.3 82 48.8
Aa31LG10G330 Aethionema arabicum HOM05D000747 ORTHO05D001683 2.3e-14 84.0 109 41.3
arahy.Tifrunner.gnm1.ann1.9BU9L2 Arachis hypogaea HOM05D005863 ORTHO05D003355 1.1e-13 81.6 233 28.3
ECA236G3808 Erigeron canadensis HOM05D000747 ORTHO05D001683 1.5e-13 81.3 169 36.1
Hund23103 Selenicereus undatus HOM05D005863 ORTHO05D003355 1.5e-13 81.3 235 28.9
HPP92_003025 Vanilla planifolia HOM05D048574 ORTHO05D003355 1.5e-13 81.3 228 29.8
Medtr2g036080 Medicago truncatula HOM05D007390 ORTHO05D009114 1.3e-12 78.2 78 43.6
MSTRG.544 Avicennia marina HOM05D005863 ORTHO05D003355 3.7e-12 76.6 78 41.0
Gorai.005G174200 Gossypium raimondii HOM05D005863 ORTHO05D003355 3.7e-12 76.6 114 31.6
Nn4g22491 Nelumbo nucifera HOM05D005863 ORTHO05D003355 4.8e-12 76.3 89 37.1
Gohir.A03G131400 Gossypium hirsutum HOM05D005863 ORTHO05D003355 1.1e-11 75.1 114 30.7
FvH4_1g28370 Fragaria vesca HOM05D014719 ORTHO05D003355 2.4e-11 73.9 394 26.4
Sed0020016 Sechium edule HOM05D005863 ORTHO05D003355 2.4e-11 73.9 103 35.0
COL.COLO4_23547 Corchorus olitorius HOM05D005863 ORTHO05D003355 4.1e-11 73.2 113 35.4
Rhsim10G0199200 Rhododendron simsii HOM05D005863 ORTHO05D003355 4.1e-11 73.2 59 49.2
Rhsim12G0037600 Rhododendron simsii HOM05D005863 ORTHO05D003355 4.1e-11 73.2 87 40.2
Phvul.001G257200 Phaseolus vulgaris HOM05D013281 ORTHO05D003355 5.3e-11 72.8 79 38.0
Rhsim10G0199400 Rhododendron simsii HOM05D005863 ORTHO05D003355 5.3e-11 72.8 59 49.2
ATR0751G078 Amborella trichopoda HOM05D005863 ORTHO05D003355 9.1e-11 72.0 295 27.5
AUR62024201 Chenopodium quinoa HOM05D025851 ORTHO05D044019 9.1e-11 72.0 79 41.8
vmacro01106 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 1.2e-10 71.6 85 35.3
VMungo1383G2020 Vigna mungo HOM05D013281 ORTHO05D003355 2.0e-10 70.9 79 39.2
Duzib268G1590 Durio zibethinus HOM05D005863 ORTHO05D003355 2.6e-10 70.5 113 30.1
Glyma.18G011700 Glycine max HOM05D013281 ORTHO05D003355 2.6e-10 70.5 81 35.8
Thecc.02G268600 Theobroma cacao HOM05D005863 ORTHO05D003355 3.4e-10 70.1 113 31.0
Duzib251G0242 Durio zibethinus HOM05D005863 ORTHO05D003355 4.5e-10 69.7 117 33.3
Lj6A818T39 Lonicera japonica HOM05D005863 ORTHO05D003355 5.9e-10 69.3 79 36.7
DCAR_024069 Daucus carota HOM05D005863 ORTHO05D003355 7.7e-10 68.9 79 38.0
EL10As2g23204 Beta vulgaris HOM05D025851 ORTHO05D003355 1.0e-09 68.6 137 27.7
GSVIVG01000596001 Vitis vinifera HOM05D005863 ORTHO05D003355 1.0e-09 68.6 109 33.0
Sed0006554 Sechium edule HOM05D005863 ORTHO05D003355 1.7e-09 67.8 81 39.5
SEGI_35034 Sequoiadendron giganteum HOM05D005863 ORTHO05D003355 1.7e-09 67.8 78 41.0
MELO3C010709.2 Cucumis melo HOM05D005863 ORTHO05D003355 2.2e-09 67.4 99 35.4
FAN23G2175 Fragaria x ananassa HOM05D014719 ORTHO05D003355 2.2e-09 67.4 91 40.7
PGR102G1092 Punica granatum HOM05D005863 ORTHO05D003355 2.2e-09 67.4 77 39.0
AT2G02770 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 2.9e-09 67.0 136 31.6
Cpa.g.sc369.6 Carica papaya HOM05D005863 ORTHO05D003355 2.9e-09 67.0 79 36.7
Duzib213G0291 Durio zibethinus HOM05D005863 ORTHO05D003355 2.9e-09 67.0 53 54.7
PSO339G3984 Papaver somniferum HOM05D005863 ORTHO05D003355 2.9e-09 67.0 88 38.6
CsaV3_2G025110 Cucumis sativus L. HOM05D005863 ORTHO05D003355 3.8e-09 66.6 99 35.4
Dinv14763 Davidia involucrata HOM05D005863 ORTHO05D003355 3.8e-09 66.6 79 35.4
CARHR215860 Cardamine hirsuta HOM05D008497 ORTHO05D003355 6.5e-09 65.9 77 40.3
HanXRQChr08g0208041 Helianthus annuus HOM05D005863 ORTHO05D003355 6.5e-09 65.9 208 25.5
Manes.12G018600 Manihot esculenta HOM05D005863 ORTHO05D003355 8.5e-09 65.5 97 33.0
ClCG08G017500 Citrullus lanatus HOM05D005863 ORTHO05D003355 1.1e-08 65.1 79 36.7
PGR031G1574 Punica granatum HOM05D005863 ORTHO05D003355 1.1e-08 65.1 79 36.7
MSTRG.7960 Avicennia marina HOM05D005863 ORTHO05D003355 1.4e-08 64.7 81 34.6
PSO384G2180 Papaver somniferum HOM05D005863 ORTHO05D003355 1.4e-08 64.7 106 34.0
Manes.13G019100 Manihot esculenta HOM05D005863 ORTHO05D003355 3.2e-08 63.5 81 32.1
Actinidia35403 Actinidia chinensis HOM05D005863 ORTHO05D003355 4.2e-08 63.2 224 31.2
AT4G00920 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 4.2e-08 63.2 130 35.4
Ca_02000_v3 Cicer arietinum L. HOM05D005863 ORTHO05D003355 5.5e-08 62.8 358 24.3
THA.LOC104825539 Tarenaya hassleriana HOM05D005863 ORTHO05D003355 1.2e-07 61.6 83 36.1
AL1G63810 Arabidopsis lyrata HOM05D008497 ORTHO05D003355 1.6e-07 61.2 144 27.8
Sp7g04810 Schrenkiella parvula HOM05D008497 ORTHO05D003355 2.1e-07 60.8 78 38.5
Atru.chr11.2201 Acer truncatum HOM05D005863 ORTHO05D003355 2.7e-07 60.5 79 35.4
Sp2g01280 Schrenkiella parvula HOM05D008497 ORTHO05D027096 6.1e-07 59.3 87 36.8
Aa31sc26G130 Aethionema arabicum HOM05D008497 ORTHO05D003355 2.3e-06 57.4 95 31.6
AT1G30060 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 2.3e-06 57.4 122 31.1
BcaC04g22481 Brassica carinata HOM05D008497 ORTHO05D003355 3.0e-06 57.0 85 37.6
FAN19G1520 Fragaria x ananassa HOM05D014719 ORTHO05D003355 3.0e-06 57.0 374 27.5
A09p15560 Brassica napus HOM05D008497 ORTHO05D003355 3.9e-06 56.6 86 37.2
C09p18810 Brassica napus HOM05D008497 ORTHO05D003355 3.9e-06 56.6 86 37.2
BolC9t54783H Brassica oleracea HOM05D008497 ORTHO05D003355 3.9e-06 56.6 86 37.2
BraA09t37196Z Brassica rapa HOM05D008497 ORTHO05D003355 3.9e-06 56.6 86 37.2
Sp7g04860 Schrenkiella parvula HOM05D008497 ORTHO05D003355 5.1e-06 56.2 139 30.9
AT2G01800 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 8.8e-06 55.5 85 34.1
FAN26G0704 Fragaria x ananassa HOM05D014719 ORTHO05D003355 8.8e-06 55.5 67 41.8


User provided reference genes

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