Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold170G38839 Striga asiatica HOM05D009108 ORTHO05D011557 7.2e-147 523.9 258 100.0
SGA_v2.0_scaffold1030G53801 Striga asiatica HOM05D009108 ORTHO05D011557 4.8e-66 255.4 214 68.2
SGA_v2.0_scaffold170G38837 Striga asiatica HOM05D009108 ORTHO05D011557 3.2e-62 242.7 222 62.6
SGA_v2.0_scaffold257G45673 Striga asiatica HOM05D009108 ORTHO05D011557 2.4e-41 173.3 128 71.1
SGA_v2.0_scaffold63G21783 Striga asiatica HOM05D009108 ORTHO05D011557 1.5e-35 154.1 251 38.2
Os03g0276850 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 6.9e-33 145.2 258 37.6
SGA_v2.0_scaffold126G33799 Striga asiatica HOM05D009108 ORTHO05D011557 6.1e-29 132.1 241 36.5
Nitab4.5_0009884g0010 Nicotiana tabacum HOM05D009108 ORTHO05D011557 5.1e-28 129.0 225 35.1
Nitab4.5_0001190g0020 Nicotiana tabacum HOM05D009108 ORTHO05D011557 6.7e-28 128.6 224 33.9
SGA_v2.0_scaffold75G24939 Striga asiatica HOM05D009108 ORTHO05D011557 9.1e-25 118.2 190 35.3
Os12g0569800 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 1.1e-19 101.3 173 38.2
FAN01G2174 Fragaria x ananassa HOM05D009108 ORTHO05D011557 8.0e-13 78.6 121 36.4
Os02g0115950 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 1.1e-09 68.2 144 31.2
SGA_v2.0_scaffold257G45674 Striga asiatica HOM05D009108 ORTHO05D011557 1.8e-09 67.4 43 79.1
SGA_v2.0_scaffold67G22574 Striga asiatica HOM05D009108 ORTHO05D405487 9.1e-09 65.1 42 78.6
Hma1.2p1_1829F.1_g304550 Hydrangea macrophylla HOM05D009108 ORTHO05D011557 5.9e-08 62.4 108 30.6
SGA_v2.0_scaffold67G22546 Striga asiatica HOM05D009108 ORTHO05D402452 6.5e-07 58.9 41 70.7
SGA_v2.0_scaffold2902G54239 Striga asiatica HOM05D009108 ORTHO05D399099 2.5e-06 57.0 39 74.4


User provided reference genes

Program Settings