Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold170G38837 Striga asiatica HOM05D009108 ORTHO05D011557 1.8e-284 981.9 494 100.0
SGA_v2.0_scaffold257G45673 Striga asiatica HOM05D009108 ORTHO05D011557 5.1e-101 372.5 237 80.2
SGA_v2.0_scaffold1030G53801 Striga asiatica HOM05D009108 ORTHO05D011557 1.5e-71 274.6 194 79.4
SGA_v2.0_scaffold170G38839 Striga asiatica HOM05D009108 ORTHO05D011557 4.4e-60 236.5 222 62.6
SGA_v2.0_scaffold63G21783 Striga asiatica HOM05D009108 ORTHO05D011557 2.7e-33 147.5 458 29.0
SGA_v2.0_scaffold126G33799 Striga asiatica HOM05D009108 ORTHO05D011557 6.8e-29 132.9 221 41.2
Os03g0276850 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 3.5e-25 120.6 269 32.7
SGA_v2.0_scaffold75G24939 Striga asiatica HOM05D009108 ORTHO05D011557 6.0e-25 119.8 353 31.4
Nitab4.5_0001190g0020 Nicotiana tabacum HOM05D009108 ORTHO05D011557 8.6e-24 115.9 222 33.8
Nitab4.5_0009884g0010 Nicotiana tabacum HOM05D009108 ORTHO05D011557 2.5e-23 114.4 223 33.6
SGA_v2.0_scaffold67G22544 Striga asiatica HOM05D009108 ORTHO05D400178 1.7e-16 91.7 68 67.6
SGA_v2.0_scaffold67G22574 Striga asiatica HOM05D009108 ORTHO05D405487 5.8e-12 76.6 49 79.6
Os12g0569800 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 4.9e-11 73.6 164 32.3
SGA_v2.0_scaffold257G45674 Striga asiatica HOM05D009108 ORTHO05D011557 6.4e-11 73.2 40 90.0
FAN01G2174 Fragaria x ananassa HOM05D009108 ORTHO05D011557 1.4e-10 72.0 87 44.8
SGA_v2.0_scaffold57G20250 Striga asiatica HOM05D047723 ORTHO05D399752 3.2e-10 70.9 83 54.2
Hma1.2p1_1829F.1_g304550 Hydrangea macrophylla HOM05D009108 ORTHO05D011557 6.0e-09 66.6 113 33.6
SGA_v2.0_scaffold57G20251 Striga asiatica HOM05D047723 ORTHO05D009503 2.3e-08 64.7 46 71.7
Os02g0115950 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 9.6e-07 59.3 99 34.3
SGA_v2.0_scaffold2902G54239 Striga asiatica HOM05D009108 ORTHO05D399099 9.6e-07 59.3 37 81.1
Os03g0821150 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 6.2e-06 56.6 95 35.8


User provided reference genes

Program Settings