Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 2.7e-169 598.6 308 100.0
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 9.3e-109 397.5 263 78.3
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 2.4e-104 382.9 263 75.3
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.4e-101 373.6 263 71.5
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 5.4e-101 371.7 266 71.1
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.2e-100 370.5 263 71.1
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 1.3e-99 367.1 261 70.9
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 1.8e-99 366.7 263 71.5
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 3.9e-99 365.5 263 70.0
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 8.7e-99 364.4 263 70.0
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 1.1e-98 364.0 258 70.9
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 2.5e-98 362.8 257 70.8
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 4.3e-98 362.1 263 70.0
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 3.7e-97 359.0 260 70.0
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 8.1e-97 357.8 263 69.2
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 8.1e-97 357.8 263 68.8
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 1.2e-95 354.0 263 69.6
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 2.0e-95 353.2 263 68.4
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 2.6e-95 352.8 255 69.4
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 2.6e-95 352.8 269 67.7
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 4.5e-95 352.1 263 68.4
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 9.9e-95 350.9 261 69.3
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 1.7e-94 350.1 263 68.8
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 3.8e-94 349.0 263 68.1
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 6.4e-94 348.2 265 67.2
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 1.4e-93 347.1 263 68.8
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 1.9e-93 346.7 264 68.6
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 3.2e-93 345.9 263 68.1
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 5.5e-93 345.1 276 65.9
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 7.1e-93 344.7 263 66.2
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 9.3e-93 344.4 260 68.5
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 1.6e-92 343.6 261 67.4
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 2.1e-92 343.2 260 67.3
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 4.6e-92 342.0 264 67.4
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.6e-92 342.0 263 66.2
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 6.0e-92 341.7 263 66.2
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 6.0e-92 341.7 263 66.2
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 1.0e-91 340.9 263 67.7
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 5.1e-91 338.6 263 67.3
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 6.7e-91 338.2 263 66.2
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 1.5e-90 337.0 281 63.3
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 2.5e-90 336.3 257 68.5
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 9.6e-90 334.3 254 68.9
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 1.3e-89 334.0 263 63.5
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 1.3e-89 334.0 263 63.9
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 1.6e-89 333.6 277 63.5
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 2.1e-89 333.2 260 66.2
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 2.8e-89 332.8 263 63.5
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 3.7e-89 332.4 260 65.4
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 3.7e-89 332.4 263 63.5
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 8.2e-89 331.3 270 63.7
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 4.0e-88 328.9 263 63.9
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 5.3e-88 328.6 254 68.1
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 6.9e-88 328.2 263 63.1
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 9.0e-88 327.8 263 63.1
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.5e-87 327.0 321 56.1
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 3.4e-87 325.9 237 70.9
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 1.7e-86 323.6 255 64.7
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 2.2e-86 323.2 254 67.7
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 4.9e-86 322.0 262 66.4
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 4.9e-86 322.0 256 64.1
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 8.4e-86 321.2 263 62.0
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 1.1e-85 320.9 256 63.7
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 1.4e-85 320.5 263 63.1
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 1.9e-85 320.1 239 69.5
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.5e-85 319.7 263 63.1
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 4.2e-85 318.9 256 63.3
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 5.5e-85 318.5 263 62.4
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 9.3e-85 317.8 263 63.1
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 2.1e-84 316.6 263 62.4
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 3.5e-84 315.8 263 60.8
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 3.5e-84 315.8 263 62.4
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 6.0e-84 315.1 264 62.1
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 1.0e-83 314.3 285 57.9
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 1.0e-83 314.3 264 61.4
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 1.9e-82 310.1 310 56.1
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 7.4e-82 308.1 260 59.6
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 9.7e-82 307.8 257 65.4
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 2.2e-81 306.6 263 60.1
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 4.8e-81 305.4 263 59.3
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 4.8e-81 305.4 256 60.9
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 1.4e-80 303.9 260 60.0
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 1.4e-80 303.9 256 57.8
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 1.8e-80 303.5 263 64.3
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 2.4e-80 303.1 263 60.1
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 3.1e-80 302.8 257 59.5
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 5.3e-80 302.0 279 58.4
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 3.4e-79 299.3 263 58.9
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 1.0e-78 297.7 263 58.9
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 1.7e-78 297.0 301 53.8
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 1.1e-77 294.3 256 59.4
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 7.9e-76 288.1 258 58.1
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 8.8e-75 284.6 266 58.3
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 8.2e-73 278.1 290 54.5
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 3.1e-72 276.2 273 53.1
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 9.1e-72 274.6 203 70.4
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 1.2e-71 274.2 227 63.0
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 3.9e-67 259.2 215 61.9
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 5.7e-66 255.4 213 62.9
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 1.8e-64 250.4 180 71.1
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 1.4e-61 240.7 141 83.0
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 4.4e-58 229.2 293 48.5
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 1.4e-56 224.2 259 51.0
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 1.8e-56 223.8 231 51.5
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 1.2e-55 221.1 258 49.6
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 1.4e-48 197.6 164 62.8
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.8e-48 197.2 236 49.6
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 2.9e-46 189.9 145 65.5
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 9.4e-45 184.9 176 55.7
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 1.6e-44 184.1 147 63.9
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 3.0e-43 179.9 117 75.2
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 4.8e-41 172.6 230 46.1
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 1.3e-38 164.5 107 75.7
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 1.6e-36 157.5 214 42.1
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 4.7e-36 156.0 187 49.2
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 1.7e-33 147.5 263 37.3
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 3.1e-32 143.3 230 39.1
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 7.0e-32 142.1 108 65.7
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 4.3e-29 132.9 84 77.4
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 5.6e-29 132.5 86 76.7
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 2.9e-25 120.2 80 73.8
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 7.3e-21 105.5 74 66.2
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 1.2e-20 104.8 102 50.0
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 4.7e-20 102.8 103 48.5
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 2.3e-19 100.5 119 52.9
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 5.2e-19 99.4 228 32.0
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.6e-15 87.8 66 60.6
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 2.1e-15 87.4 240 28.8
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 4.6e-15 86.3 101 46.5
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 4.6e-15 86.3 54 75.9
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 1.3e-14 84.7 143 36.4
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 1.7e-14 84.3 58 67.2
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 3.0e-14 83.6 149 38.9
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 1.2e-12 78.2 121 38.0
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.2e-12 78.2 58 67.2


User provided reference genes

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