Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold170G38813 Striga asiatica HOM05D000707 ORTHO05D008764 2.1e-126 455.7 227 100.0
MSTRG.2209 Avicennia marina HOM05D000707 ORTHO05D008764 1.5e-26 124.0 263 39.2
Dinv16151 Davidia involucrata HOM05D002710 ORTHO05D002905 2.3e-19 100.1 135 44.4
Migut.E00382 Erythranthe guttata HOM05D000707 ORTHO05D008764 1.9e-18 97.1 215 39.1
Hma1.2p1_0767F.1_g215410 Hydrangea macrophylla HOM05D000707 ORTHO05D008764 2.1e-17 93.6 130 42.3
SalBow8G3524 Salvia bowleyana HOM05D000707 ORTHO05D008764 4.7e-17 92.4 184 38.6
TAR622G0905 Trochodendron aralioides HOM05D000707 ORTHO05D008764 4.7e-17 92.4 94 51.1
arahy.Tifrunner.gnm1.ann1.5RG53P Arachis hypogaea HOM05D000707 ORTHO05D008764 1.4e-16 90.9 149 38.9
arahy.Tifrunner.gnm1.ann1.C30NXK Arachis hypogaea HOM05D000707 ORTHO05D008764 1.4e-16 90.9 149 38.9
Actinidia31997 Actinidia chinensis HOM05D000707 ORTHO05D008764 1.5e-15 87.4 155 40.0
GSVIVG01011821001 Vitis vinifera HOM05D000707 ORTHO05D008764 1.5e-15 87.4 77 57.1
VMungo0720G0641 Vigna mungo HOM05D000707 ORTHO05D008764 2.0e-15 87.0 149 36.9
Ca_11123_v3 Cicer arietinum L. HOM05D000707 ORTHO05D008764 9.8e-15 84.7 113 41.6
Glyma.20G121700 Glycine max HOM05D000707 ORTHO05D008764 9.8e-15 84.7 130 40.0
Lj3C878G6 Lonicera japonica HOM05D000707 ORTHO05D008764 1.3e-14 84.3 120 41.7
TPR.G4924 Trifolium pratense HOM05D000707 ORTHO05D008764 1.7e-14 84.0 110 44.5
Ciclev10014969m.g Citrus clementina HOM05D000707 ORTHO05D008764 3.7e-14 82.8 84 51.2
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 4.9e-14 82.4 134 40.3
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 4.9e-14 82.4 134 40.3
Glyma.10G269400 Glycine max HOM05D000707 ORTHO05D008764 4.9e-14 82.4 181 33.1
Potri.008G125200 Populus trichocarpa HOM05D000707 ORTHO05D008764 4.9e-14 82.4 137 42.3
CiPaw.05G243700 Carya illinoinensis HOM05D000707 ORTHO05D008764 8.3e-14 81.6 154 37.7
QL01p003345 Quercus lobata HOM05D000707 ORTHO05D008764 8.3e-14 81.6 121 44.6
Medtr1g109350 Medicago truncatula HOM05D000707 ORTHO05D008764 1.1e-13 81.3 113 39.8
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.4e-13 80.9 97 47.4
MBI10_g08542_MAGBIO Magnolia biondii HOM05D000707 ORTHO05D008764 1.4e-13 80.9 157 35.7
Sabra08G0094600 Salix brachista HOM05D000707 ORTHO05D008764 1.8e-13 80.5 151 38.4
Cpa.g.sc65.76 Carica papaya HOM05D000707 ORTHO05D008764 3.2e-13 79.7 96 50.0
FvH4_4g26550 Fragaria vesca HOM05D000707 ORTHO05D008764 3.2e-13 79.7 134 41.0
Lsat_1_v5_gn_8_42261 Lactuca sativa HOM05D000707 ORTHO05D008764 3.2e-13 79.7 91 47.3
Lj5g0001004 Lotus japonicus HOM05D000707 ORTHO05D008764 4.1e-13 79.3 97 45.4
Phvul.007G033100 Phaseolus vulgaris HOM05D000707 ORTHO05D008764 4.1e-13 79.3 118 39.8
Psat6g223840 Pisum sativum HOM05D000707 ORTHO05D008764 5.4e-13 79.0 113 38.9
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 7.0e-13 78.6 88 47.7
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 7.0e-13 78.6 150 34.7
TAR371G1165 Trochodendron aralioides HOM05D000707 ORTHO05D008764 7.0e-13 78.6 108 44.4
Manes.14G108200 Manihot esculenta HOM05D000707 ORTHO05D008764 9.2e-13 78.2 183 35.0
RcHm_v2.0_Chr4g0434201 Rosa chinensis HOM05D000707 ORTHO05D008764 9.2e-13 78.2 106 44.3
MD16G1035900 Malus domestica HOM05D000707 ORTHO05D008764 1.2e-12 77.8 78 50.0
TAR371G0296 Trochodendron aralioides HOM05D000707 ORTHO05D008764 1.6e-12 77.4 108 43.5
TAR629G1754 Trochodendron aralioides HOM05D000707 ORTHO05D008764 1.6e-12 77.4 157 36.9
DCAR_026755 Daucus carota HOM05D000707 ORTHO05D008764 2.0e-12 77.0 129 38.8
Actinidia16022 Actinidia chinensis HOM05D000707 ORTHO05D008764 2.7e-12 76.6 96 44.8
Nn3g17972 Nelumbo nucifera HOM05D000707 ORTHO05D008764 2.7e-12 76.6 104 42.3
PGSC0003DMG400005997 Solanum tuberosum HOM05D000707 ORTHO05D008764 2.7e-12 76.6 76 50.0
Thecc.02G219600 Theobroma cacao HOM05D000707 ORTHO05D008764 2.7e-12 76.6 141 34.8
THA.LOC104808123 Tarenaya hassleriana HOM05D000707 ORTHO05D008764 3.5e-12 76.3 207 32.9
PSO017G6731 Papaver somniferum HOM05D000707 ORTHO05D008764 4.6e-12 75.9 102 43.1
Peaxi162Scf00564g00613 Petunia axillaris HOM05D000707 ORTHO05D008764 7.8e-12 75.1 116 37.9
CAN.G10.10 Capsicum annuum HOM05D000707 ORTHO05D008764 1.0e-11 74.7 97 42.3
MD13G1034400 Malus domestica HOM05D000707 ORTHO05D008764 1.3e-11 74.3 78 48.7
PSO478G0738 Papaver somniferum HOM05D000707 ORTHO05D008764 1.7e-11 73.9 72 52.8
Eucgr.B02861 Eucalyptus grandis HOM05D000707 ORTHO05D008764 3.0e-11 73.2 89 44.9
Sopen04g002550 Solanum pennellii HOM05D000707 ORTHO05D008764 3.0e-11 73.2 76 48.7
ClCG05G022390 Citrullus lanatus HOM05D000707 ORTHO05D008764 6.6e-11 72.0 135 33.3
HanXRQChr08g0213211 Helianthus annuus HOM05D000707 ORTHO05D008764 6.6e-11 72.0 78 50.0
CsaV3_5G034710 Cucumis sativus L. HOM05D000707 ORTHO05D008764 8.6e-11 71.6 137 32.8
Prupe.1G318100 Prunus persica HOM05D000707 ORTHO05D008764 8.6e-11 71.6 76 46.1
Cc11_g09540 Coffea canephora HOM05D000707 ORTHO05D008764 1.5e-10 70.9 247 27.9
SEGI_03088 Sequoiadendron giganteum HOM05D000707 ORTHO05D001462 1.9e-10 70.5 88 40.9
Solyc04g007470.3 Solanum lycopersicum HOM05D000707 ORTHO05D008764 3.3e-10 69.7 76 47.4
Atru.chr11.289 Acer truncatum HOM05D000707 ORTHO05D008764 4.3e-10 69.3 95 42.1
MELO3C012284.2 Cucumis melo HOM05D000707 ORTHO05D008764 7.3e-10 68.6 161 34.2
Oeu057767.1 Olea europaea HOM05D000707 ORTHO05D008764 7.3e-10 68.6 52 63.5
Haze_00667 Corylus avellana HOM05D000707 ORTHO05D008764 1.2e-09 67.8 73 49.3
PGR102G2808 Punica granatum HOM05D000707 ORTHO05D008764 1.2e-09 67.8 93 44.1
Hund25024 Selenicereus undatus HOM05D000707 ORTHO05D008764 1.2e-09 67.8 130 34.6
AUR62014102 Chenopodium quinoa HOM05D000707 ORTHO05D008764 1.6e-09 67.4 178 29.2
A07p34640 Brassica napus HOM05D000082 ORTHO05D000038 2.1e-09 67.0 68 48.5
Gohir.A05G314900 Gossypium hirsutum HOM05D000707 ORTHO05D008764 6.2e-09 65.5 93 40.9
Nn4g23976 Nelumbo nucifera HOM05D000707 ORTHO05D008764 8.0e-09 65.1 136 31.6
BcaC08g46249 Brassica carinata HOM05D000082 ORTHO05D000038 1.0e-08 64.7 65 47.7
Gohir.D05G316200 Gossypium hirsutum HOM05D000707 ORTHO05D008764 1.4e-08 64.3 93 39.8
Gorai.009G338600 Gossypium raimondii HOM05D000707 ORTHO05D008764 1.4e-08 64.3 93 39.8
AUR62002793 Chenopodium quinoa HOM05D000707 ORTHO05D008764 2.3e-08 63.5 135 32.6
C06p41810 Brassica napus HOM05D000082 ORTHO05D000038 3.1e-08 63.2 65 47.7
Thhalv10018809m.g Eutrema salsugineum HOM05D000707 ORTHO05D008764 3.1e-08 63.2 59 52.5
Sed0008167 Sechium edule HOM05D000707 ORTHO05D008764 3.1e-08 63.2 140 31.4
Ah.03g138490 Amaranthus hybridus HOM05D000707 ORTHO05D008764 6.8e-08 62.0 123 30.9
ECA233G4661 Erigeron canadensis HOM05D000707 ORTHO05D008764 8.9e-08 61.6 182 31.9
Manes.06G064000 Manihot esculenta HOM05D000707 ORTHO05D008764 8.9e-08 61.6 74 51.4
Nitab4.5_0000057g0010 Nicotiana tabacum HOM05D000707 ORTHO05D008764 8.9e-08 61.6 75 45.3
C06p37820 Brassica napus HOM05D000707 ORTHO05D008764 1.5e-07 60.8 59 49.2
BolC6t38883H Brassica oleracea HOM05D000707 ORTHO05D008764 1.5e-07 60.8 59 49.2
AL2G27030 Arabidopsis lyrata HOM05D000707 ORTHO05D008764 2.6e-07 60.1 158 33.5
BolC6t39247H Brassica oleracea HOM05D000082 ORTHO05D000038 3.4e-07 59.7 75 42.7
Carub.0002s1468 Capsella rubella HOM05D000707 ORTHO05D008764 3.4e-07 59.7 68 48.5
CARHR060880 Cardamine hirsuta HOM05D000707 ORTHO05D008764 3.4e-07 59.7 59 50.8
Sp5g23200 Schrenkiella parvula HOM05D000707 ORTHO05D008764 4.4e-07 59.3 55 50.9
AT1G68190 Arabidopsis thaliana HOM05D000707 ORTHO05D008764 5.8e-07 58.9 156 32.7
TWI31G0568 Tripterygium wilfordii HOM05D000707 ORTHO05D008764 7.5e-07 58.5 129 33.3
BcaB03g15405 Brassica carinata HOM05D000707 ORTHO05D008764 9.8e-07 58.2 155 33.5
BraA07t31082Z Brassica rapa HOM05D000082 ORTHO05D000038 9.8e-07 58.2 68 45.6
CANSAT01G3194 Cannabis sativa HOM05D000707 ORTHO05D008764 9.8e-07 58.2 165 26.7
BcaC08g45987 Brassica carinata HOM05D000707 ORTHO05D008764 1.3e-06 57.8 155 32.3
A07p32100 Brassica napus HOM05D002710 ORTHO05D008764 1.3e-06 57.8 59 47.5
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 1.3e-06 57.8 59 47.5
EL10Ac6g14281 Beta vulgaris HOM05D000707 ORTHO05D008764 1.7e-06 57.4 120 33.3
Prupe.1G318400 Prunus persica HOM05D000707 ORTHO05D008764 2.9e-06 56.6 77 45.5


User provided reference genes

Program Settings