Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 9.4e-133 476.9 241 100.0
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 2.9e-73 279.3 241 64.3
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 7.6e-66 254.6 241 61.0
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 2.9e-65 252.7 241 59.3
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 2.1e-55 219.9 242 54.5
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 2.1e-55 219.9 239 52.7
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 6.0e-55 218.4 236 52.5
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 7.9e-55 218.0 241 53.9
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 1.0e-54 217.6 241 52.7
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 9.6e-53 211.1 241 51.5
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 9.6e-53 211.1 241 52.3
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 2.1e-52 209.9 240 50.8
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 6.2e-52 208.4 240 50.4
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 1.1e-51 207.6 242 51.7
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 4.0e-51 205.7 247 52.2
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 6.9e-51 204.9 238 51.7
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 1.5e-50 203.8 239 49.0
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 2.0e-50 203.4 242 50.8
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 4.5e-50 202.2 244 50.4
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 2.2e-49 199.9 240 48.8
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 2.9e-49 199.5 241 49.4
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 1.4e-48 197.2 246 50.0
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 4.2e-48 195.7 246 50.4
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 5.5e-48 195.3 242 49.2
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 7.1e-48 194.9 238 47.9
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 2.1e-47 193.4 244 50.4
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 3.5e-47 192.6 243 48.6
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 4.6e-47 192.2 243 50.2
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 3.9e-46 189.1 237 48.1
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 3.9e-46 189.1 244 50.0
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 6.7e-46 188.3 240 47.9
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 1.9e-45 186.8 239 45.6
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 3.3e-45 186.0 236 47.5
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 5.7e-45 185.3 237 47.7
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 9.6e-45 184.5 241 46.1
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 9.6e-45 184.5 241 46.1
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 1.6e-44 183.7 238 48.7
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 1.6e-44 183.7 238 48.3
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 2.1e-44 183.3 243 47.7
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 3.7e-44 182.6 244 48.8
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 3.7e-44 182.6 248 47.2
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 6.3e-44 181.8 244 47.5
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.8e-43 180.3 240 47.5
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 3.1e-43 179.5 245 44.9
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 4.1e-43 179.1 241 44.8
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 5.3e-43 178.7 236 47.0
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 6.9e-43 178.3 245 48.6
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 1.5e-42 177.2 249 46.2
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.6e-42 176.4 243 46.5
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 2.6e-42 176.4 243 48.6
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 3.4e-42 176.0 246 45.1
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 3.4e-42 176.0 242 47.5
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 5.9e-42 175.3 240 45.8
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 7.6e-42 174.9 238 45.8
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 7.6e-42 174.9 241 45.2
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 2.2e-41 173.3 243 44.9
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.2e-41 173.3 246 43.9
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 3.8e-41 172.6 233 43.3
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 3.8e-41 172.6 241 44.8
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 5.0e-41 172.2 239 43.9
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 1.9e-40 170.2 234 44.9
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 1.9e-40 170.2 244 46.7
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 1.9e-40 170.2 131 69.5
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 2.5e-40 169.9 240 44.6
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 7.2e-40 168.3 242 46.3
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 9.3e-40 167.9 248 43.5
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 1.2e-39 167.5 230 45.7
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 2.7e-39 166.4 240 44.2
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 2.7e-39 166.4 240 43.3
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 4.6e-39 165.6 243 42.0
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 4.6e-39 165.6 166 56.0
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 7.9e-39 164.9 232 44.8
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.0e-38 164.5 240 44.6
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 1.0e-38 164.5 235 43.8
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 2.3e-38 163.3 244 45.5
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 5.1e-38 162.2 242 45.9
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 5.1e-38 162.2 128 66.4
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 6.7e-38 161.8 243 41.2
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 1.5e-37 160.6 245 41.6
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 1.5e-37 160.6 286 38.5
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 1.5e-37 160.6 188 52.1
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 2.5e-37 159.8 241 44.0
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 3.3e-37 159.5 242 43.0
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 5.7e-37 158.7 247 42.5
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 7.4e-37 158.3 241 42.3
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 2.2e-36 156.8 250 43.6
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 6.3e-36 155.2 238 40.3
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 1.8e-35 153.7 216 47.2
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 1.7e-33 147.1 241 39.8
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 8.5e-33 144.8 245 42.9
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 8.5e-33 144.8 173 53.2
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 2.5e-32 143.3 240 41.2
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 2.5e-32 143.3 244 40.2
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 3.2e-32 142.9 240 41.7
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 3.6e-31 139.4 241 41.9
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 1.8e-30 137.1 237 42.2
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 8.8e-30 134.8 145 55.9
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 1.3e-28 131.0 236 40.7
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 8.2e-28 128.3 240 35.0
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.1e-27 127.9 235 37.9
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.8e-27 127.1 257 37.7
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 4.1e-27 125.9 235 37.4
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 3.8e-25 119.4 342 31.6
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 8.5e-25 118.2 242 36.4
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 6.7e-22 108.6 126 47.6
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.3e-20 104.4 203 40.9
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 2.8e-20 103.2 118 48.3
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.6e-18 97.4 254 32.3
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.9e-16 90.5 251 31.5
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 1.0e-14 84.7 53 71.7
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 1.4e-11 74.3 237 30.4
BraA07t30840Z Brassica rapa HOM05D006456 ORTHO05D007588 1.2e-10 71.2 98 45.9
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 1.6e-10 70.9 98 45.9
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 5.0e-09 65.9 49 67.3
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 1.2e-07 61.2 132 29.5
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 1.6e-07 60.8 80 41.2
SHI16262 Sapria himalayana HOM05D006456 ORTHO05D007588 1.6e-07 60.8 244 32.4
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 2.1e-07 60.5 119 37.8


User provided reference genes

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