Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07878 Striga asiatica HOM05D023227 ORTHO05D023168 4.6e-95 351.7 242 100.0
SGA_v2.0_scaffold326G48733 Striga asiatica HOM05D023227 ORTHO05D023168 1.2e-82 310.5 242 90.5
SGA_v2.0_scaffold83G26373 Striga asiatica HOM05D023227 ORTHO05D023168 3.6e-39 166.0 147 77.6
SGA_v2.0_scaffold17G07986 Striga asiatica HOM05D023227 ORTHO05D023168 5.0e-33 145.6 113 70.8
SGA_v2.0_scaffold192G40616 Striga asiatica HOM05D000100 ORTHO05D000052 9.4e-24 114.8 335 32.8
SGA_v2.0_scaffold41G15778 Striga asiatica HOM05D023227 ORTHO05D023168 1.6e-18 97.4 63 77.8
Migut.F00274 Erythranthe guttata HOM05D000100 ORTHO05D000052 4.1e-11 72.8 134 41.0
MSTRG.27075 Avicennia marina HOM05D000100 ORTHO05D000052 1.0e-09 68.2 136 39.7
Manes.10G133680 Manihot esculenta HOM05D000100 ORTHO05D000052 1.5e-08 64.3 81 48.1
HPP92_008830 Vanilla planifolia HOM05D000100 ORTHO05D000052 3.3e-08 63.2 130 36.9
SalBow4G1158 Salvia bowleyana HOM05D000100 ORTHO05D000052 5.6e-08 62.4 128 39.1
SalBow4G0086 Salvia bowleyana HOM05D000100 ORTHO05D000052 7.3e-08 62.0 137 35.0
Rhsim03G0192900 Rhododendron simsii HOM05D000100 ORTHO05D000052 9.5e-08 61.6 130 34.6
Rhsim03G0194400 Rhododendron simsii HOM05D000100 ORTHO05D000052 9.5e-08 61.6 130 34.6
vmacro06608 Vaccinium macrocarpon HOM05D000100 ORTHO05D000052 9.5e-08 61.6 130 37.7
Cc02_g02190 Coffea canephora HOM05D000100 ORTHO05D000052 1.6e-07 60.8 130 36.2
HanXRQChr14g0448921 Helianthus annuus HOM05D000100 ORTHO05D000052 2.1e-07 60.5 130 37.7
Sabra04G0046700 Salix brachista HOM05D000100 ORTHO05D000052 3.6e-07 59.7 129 37.2
Sabra14G0127900 Salix brachista HOM05D000100 ORTHO05D000052 8.0e-07 58.5 130 36.9
Manes.10G133701 Manihot esculenta HOM05D000100 ORTHO05D000052 1.4e-06 57.8 100 40.0
Lj1C1008T2 Lonicera japonica HOM05D000100 ORTHO05D000052 1.8e-06 57.4 128 35.2
Oeu049090.2 Olea europaea HOM05D000100 ORTHO05D000052 1.8e-06 57.4 138 34.8
HanXRQChr14g0448931 Helianthus annuus HOM05D000100 ORTHO05D000052 2.3e-06 57.0 60 55.0
Manes.10G133662 Manihot esculenta HOM05D000100 ORTHO05D000052 3.0e-06 56.6 100 39.0
Manes.10G133692 Manihot esculenta HOM05D000100 ORTHO05D000052 3.0e-06 56.6 100 39.0
Manes.10G133707 Manihot esculenta HOM05D000100 ORTHO05D000052 3.0e-06 56.6 100 39.0
Sabra04G0046800 Salix brachista HOM05D000100 ORTHO05D000052 4.0e-06 56.2 130 34.6
Actinidia08593 Actinidia chinensis HOM05D000100 ORTHO05D000052 6.8e-06 55.5 130 34.6
Cfa021270 Carpinus fangiana HOM05D000100 ORTHO05D000052 6.8e-06 55.5 84 44.0
QL09p012253 Quercus lobata HOM05D000100 ORTHO05D000052 6.8e-06 55.5 87 46.0
MBI07_g11734_MAGBIO Magnolia biondii HOM05D000100 ORTHO05D000052 8.9e-06 55.1 130 31.5
Oeu049085.1 Olea europaea HOM05D000100 ORTHO05D000052 8.9e-06 55.1 135 32.6


User provided reference genes

Program Settings