Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 1.9e-142 509.2 261 100.0
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 5.0e-87 325.1 269 66.2
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 8.4e-87 324.3 269 66.2
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 1.0e-84 317.4 270 63.3
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 7.2e-78 294.7 269 59.1
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 6.7e-76 288.1 268 57.8
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 9.7e-75 284.3 267 58.1
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 1.1e-73 280.8 253 62.5
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 5.3e-73 278.5 266 56.8
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 4.5e-72 275.4 271 57.2
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 2.9e-71 272.7 273 57.5
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 1.1e-70 270.8 274 54.0
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 1.4e-70 270.4 265 55.5
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 1.9e-70 270.0 275 55.6
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 1.9e-70 270.0 271 56.1
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 1.9e-70 270.0 271 56.1
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 1.2e-69 267.3 273 54.6
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.0e-68 264.2 273 56.4
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 1.0e-68 264.2 273 56.4
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 1.0e-68 264.2 272 55.9
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 3.0e-68 262.7 267 56.9
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 8.8e-68 261.2 250 57.2
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 1.1e-67 260.8 273 53.1
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 7.4e-67 258.1 273 54.9
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 9.7e-67 257.7 269 53.2
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 1.7e-66 256.9 267 52.8
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 2.2e-66 256.5 262 54.2
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 2.2e-66 256.5 273 54.6
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 2.8e-66 256.1 273 54.6
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 3.7e-66 255.8 264 54.9
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 2.4e-65 253.1 267 53.6
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 9.1e-65 251.1 273 51.3
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 1.6e-64 250.4 255 56.1
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 3.5e-64 249.2 276 52.2
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 3.5e-64 249.2 273 52.0
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 5.9e-64 248.4 273 51.6
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 7.7e-64 248.1 267 52.8
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 7.7e-64 248.1 267 52.8
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 7.7e-64 248.1 269 53.9
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 1.0e-63 247.7 268 53.7
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.7e-63 246.9 273 50.5
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 1.7e-63 246.9 274 52.6
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 2.2e-63 246.5 273 52.0
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 2.2e-63 246.5 266 53.0
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 3.8e-63 245.7 268 53.7
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 6.5e-63 245.0 275 52.0
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 8.5e-63 244.6 274 51.8
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 8.5e-63 244.6 274 51.8
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 8.5e-63 244.6 255 53.7
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 2.5e-62 243.0 269 52.8
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 5.5e-62 241.9 273 50.2
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 9.4e-62 241.1 272 50.0
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 2.7e-61 239.6 274 51.8
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 4.7e-61 238.8 274 50.0
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 6.1e-61 238.4 233 54.5
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 1.0e-60 237.7 274 51.5
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 1.0e-60 237.7 248 52.4
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 1.8e-60 236.9 259 51.4
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 1.8e-60 236.9 274 50.0
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 2.3e-60 236.5 268 50.7
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 2.3e-60 236.5 273 51.3
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 2.3e-60 236.5 276 50.0
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 3.0e-60 236.1 265 53.2
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 1.1e-59 234.2 269 52.4
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 7.5e-59 231.5 274 49.3
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 9.7e-59 231.1 274 49.6
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 1.3e-58 230.7 270 51.5
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 1.7e-58 230.3 270 51.1
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 3.7e-58 229.2 267 50.6
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 1.4e-57 227.3 268 51.5
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 1.4e-57 227.3 274 48.9
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 2.4e-57 226.5 271 51.7
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 2.4e-57 226.5 271 51.7
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 3.1e-57 226.1 273 50.9
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 3.1e-57 226.1 273 50.9
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 3.1e-57 226.1 213 57.7
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 4.1e-57 225.7 271 50.2
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 4.1e-57 225.7 268 51.5
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 5.3e-57 225.3 267 50.2
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 5.3e-57 225.3 274 49.6
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 5.9e-56 221.9 271 50.2
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 3.2e-54 216.1 265 49.8
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 3.2e-54 216.1 265 49.8
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 1.2e-53 214.2 266 50.0
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 2.7e-53 213.0 268 50.7
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 6.1e-53 211.8 201 56.2
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 2.3e-52 209.9 215 54.4
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 4.1e-49 199.1 264 47.0
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 1.6e-48 197.2 267 49.1
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 2.0e-48 196.8 267 50.2
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 4.5e-48 195.7 264 48.1
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 5.0e-47 192.2 273 46.2
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 6.5e-47 191.8 257 45.9
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 8.5e-47 191.4 273 46.2
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 1.1e-46 191.0 235 47.7
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.9e-46 190.3 271 42.4
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 1.3e-42 177.6 266 44.7
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 1.6e-40 170.6 246 43.1
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 7.3e-38 161.8 218 48.2
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 9.5e-38 161.4 257 43.2
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 2.3e-36 156.8 268 41.0
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 2.0e-35 153.7 237 41.4
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 8.3e-34 148.3 195 47.2
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 8.3e-34 148.3 268 39.6
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 1.1e-33 147.9 236 40.3
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 4.1e-33 146.0 195 46.7
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 2.1e-29 133.7 215 37.7
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 8.9e-28 128.3 223 42.6
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 2.0e-27 127.1 266 33.1
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 7.0e-25 118.6 214 37.4
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 1.2e-24 117.9 218 40.4
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 1.5e-22 110.9 150 43.3
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 8.1e-21 105.1 102 51.0
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 1.8e-20 104.0 230 35.7
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 5.4e-17 92.4 118 46.6
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 4.6e-16 89.4 89 56.2
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.0e-15 88.2 112 43.8
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 1.0e-15 88.2 82 54.9
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 6.4e-10 68.9 159 35.8
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 3.0e-07 60.1 64 50.0


User provided reference genes

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