Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 0.0e+00 2276.9 1129 100.0
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 6.1e-283 978.0 1090 51.6
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 4.4e-233 812.4 1172 44.2
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 5.4e-223 778.9 1154 42.9
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 9.7e-188 661.8 1078 41.3
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 1.7e-179 634.4 1078 41.3
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 2.9e-176 623.6 1194 36.4
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 4.4e-164 583.2 1151 36.6
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 4.5e-161 573.2 1331 33.7
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 2.5e-159 567.4 1320 33.9
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 8.0e-158 562.4 1273 33.5
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 5.2e-157 559.7 1227 35.3
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 6.7e-157 559.3 1208 34.0
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 6.7e-157 559.3 1316 33.1
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 2.9e-152 543.9 1118 35.9
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 6.5e-152 542.7 1307 31.1
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 2.5e-151 540.8 1223 33.5
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 9.4e-151 538.9 1272 33.3
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 1.6e-150 538.1 1297 32.7
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 4.4e-148 530.0 1200 33.7
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 4.8e-147 526.6 1356 31.9
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 5.9e-145 519.6 1308 32.9
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 5.0e-144 516.5 1104 35.0
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 1.4e-141 508.4 1289 32.4
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 4.0e-141 506.9 1301 32.2
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 2.0e-140 504.6 1179 33.7
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 9.8e-140 502.3 1405 30.5
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 2.8e-139 500.7 1186 32.4
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 7.8e-137 492.7 1537 29.3
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 2.9e-136 490.7 1165 33.4
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 2.9e-136 490.7 1327 32.2
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 1.0e-133 482.3 1216 31.2
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 1.4e-133 481.9 1547 29.0
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 1.8e-133 481.5 1274 31.2
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 3.1e-133 480.7 1246 31.5
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 4.9e-131 473.4 1319 30.0
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 1.2e-129 468.8 1314 31.8
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 1.3e-128 465.3 1225 31.1
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 6.6e-128 463.0 1268 30.4
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 1.5e-127 461.8 1219 30.8
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 1.6e-126 458.4 1458 28.7
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 1.6e-126 458.4 1298 29.4
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 2.1e-126 458.0 1279 29.8
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 3.6e-126 457.2 1324 30.5
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 1.4e-125 455.3 1339 29.1
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 2.6e-124 451.1 1464 28.4
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 3.4e-124 450.7 1086 32.9
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 4.4e-124 450.3 1313 30.0
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 1.7e-123 448.4 1177 31.2
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 6.4e-123 446.4 1295 29.9
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 8.3e-123 446.0 1340 29.3
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 8.3e-123 446.0 1251 30.2
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 4.1e-122 443.7 1289 30.0
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 3.0e-120 437.6 1353 29.5
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 9.5e-119 432.6 1232 29.3
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 1.6e-118 431.8 1250 29.0
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 3.6e-118 430.6 1333 29.1
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 6.2e-118 429.9 1255 30.9
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 9.9e-116 422.5 1245 30.0
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 2.9e-115 421.0 1283 28.8
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 4.9e-115 420.2 1285 28.5
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 5.4e-114 416.8 1246 29.1
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 4.6e-113 413.7 1298 29.0
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 7.8e-113 412.9 1257 29.3
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 3.9e-112 410.6 1418 27.5
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 3.9e-112 410.6 1371 27.7
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 5.1e-112 410.2 1298 29.1
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 1.9e-111 408.3 1385 27.7
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 2.5e-111 407.9 1219 29.5
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 1.1e-109 402.5 1221 28.6
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 3.1e-109 401.0 1122 30.5
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 3.4e-108 397.5 1274 28.6
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 6.4e-107 393.3 1327 28.3
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 6.4e-107 393.3 1327 28.3
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 7.1e-106 389.8 1332 28.2
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 2.1e-105 388.3 1254 28.2
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 1.1e-103 382.5 1296 28.7
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 1.9e-103 381.7 955 30.9
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 1.9e-103 381.7 1259 28.7
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 5.8e-100 370.2 1158 28.1
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 3.8e-99 367.5 1503 26.0
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 7.8e-97 359.8 1118 28.5
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 3.3e-95 354.4 1622 26.0
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 2.2e-91 341.7 462 42.4
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 4.9e-91 340.5 1148 26.4
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 3.9e-88 330.9 455 41.1
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 9.6e-87 326.2 1557 26.2
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 3.7e-86 324.3 1269 26.3
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 5.8e-84 317.0 1355 26.1
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 3.8e-83 314.3 902 30.2
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 5.5e-82 310.5 1224 26.4
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 3.3e-79 301.2 1229 26.0
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 7.6e-76 290.0 332 49.1
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 1.9e-71 275.4 1050 27.0
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 7.2e-66 256.9 516 37.0
CSS0007829 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.6e-65 255.8 914 28.2
CSS0011617 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.6e-65 255.8 914 28.2
TAR629G1003 Trochodendron aralioides HOM05D004942 ORTHO05D005687 1.4e-64 252.7 279 45.9
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 1.8e-64 252.3 545 34.5
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 2.4e-61 241.9 687 30.3
Atru.chr11.1596 Acer truncatum HOM05D004942 ORTHO05D005687 2.6e-60 238.4 275 43.3
Dinv34045 Davidia involucrata HOM05D004942 ORTHO05D005687 3.4e-60 238.0 834 28.2
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 5.0e-59 234.2 238 54.2
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 6.5e-59 233.8 480 30.6
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 3.2e-58 231.5 227 55.5
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 7.9e-57 226.9 391 38.4
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 7.2e-50 203.8 483 34.2
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.2e-49 203.0 301 44.2
MSTRG.7735 Avicennia marina HOM05D004942 ORTHO05D005687 8.8e-48 196.8 140 70.0
CDE11G1026 Ceratophyllum demersum HOM05D004942 ORTHO05D005687 2.3e-40 172.2 353 30.3
SMO269G0037 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 6.8e-32 144.1 1092 23.2
Gohir.D12G163150 Gossypium hirsutum HOM05D004942 ORTHO05D005687 3.4e-31 141.7 136 53.7
Gorai.012G127400 Gossypium raimondii HOM05D004942 ORTHO05D005687 7.5e-31 140.6 149 49.7
SHI10798 Sapria himalayana HOM05D004942 ORTHO05D005687 7.5e-31 140.6 756 25.7
SEGI_21482 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 5.4e-29 134.4 220 37.3
CSS0006420 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.0e-27 130.2 81 74.1
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 1.2e-25 123.2 159 42.1
CSS0004641 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 6.1e-25 120.9 169 39.6
MBI16_g47661_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 3.0e-24 118.6 94 60.6
CSS0033973 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 2.9e-22 112.1 76 69.7
GSVIVG01026037001 Vitis vinifera HOM05D004942 ORTHO05D005687 2.4e-21 109.0 148 45.3
SHI10799 Sapria himalayana HOM05D004942 ORTHO05D005687 3.1e-16 92.0 82 58.5
Aqoxy4G01498 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 1.3e-14 86.7 81 56.8
GSVIVG01015130001 Vitis vinifera HOM05D004942 ORTHO05D005687 9.2e-13 80.5 58 69.0
Oeu028721.1 Olea europaea HOM05D004942 ORTHO05D005687 3.5e-12 78.6 119 42.0
GSVIVG01037061001 Vitis vinifera HOM05D004942 ORTHO05D005687 3.0e-11 75.5 58 65.5
GSVIVG01026043001 Vitis vinifera HOM05D004942 ORTHO05D005687 3.9e-11 75.1 59 62.7
SEGI_38362 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 3.1e-08 65.5 122 34.4
SHI10796 Sapria himalayana HOM05D004942 ORTHO05D005687 8.3e-06 57.4 127 29.1
TAR629G0168 Trochodendron aralioides HOM05D004942 ORTHO05D005687 8.3e-06 57.4 163 34.4


User provided reference genes

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