Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07808 Striga asiatica HOM05D005225 ORTHO05D006830 2.5e-150 535.4 267 100.0
SGA_v2.0_scaffold85G26791 Striga asiatica HOM05D005225 ORTHO05D006830 1.1e-81 307.4 237 70.9
SGA_v2.0_scaffold45G17115 Striga asiatica HOM05D001733 ORTHO05D001882 9.0e-60 234.6 154 79.9
Migut.L01174 Erythranthe guttata HOM05D005225 ORTHO05D006830 2.5e-57 226.5 241 53.1
SalBow2G3373 Salvia bowleyana HOM05D005225 ORTHO05D006830 1.0e-55 221.1 241 51.9
Manes.10G001000 Manihot esculenta HOM05D005225 ORTHO05D006830 1.8e-55 220.3 241 52.3
unitig_22.g6894 Utricularia gibba HOM05D005225 ORTHO05D006830 6.7e-55 218.4 241 52.3
Sc04g0007480 Simmondsia chinensis HOM05D005225 ORTHO05D006830 2.1e-53 213.4 240 49.6
Sabra08G0073600 Salix brachista HOM05D005225 ORTHO05D006830 8.2e-53 211.5 240 50.4
MSTRG.7736 Avicennia marina HOM05D005225 ORTHO05D006830 1.1e-52 211.1 241 50.6
HanXRQChr12g0375111 Helianthus annuus HOM05D005225 ORTHO05D006830 1.4e-52 210.7 241 49.4
AUR62003082 Chenopodium quinoa HOM05D005225 ORTHO05D006830 2.4e-52 209.9 240 48.8
Cpa.g.sc1.153 Carica papaya HOM05D005225 ORTHO05D006830 3.1e-52 209.5 240 49.2
DCAR_004043 Daucus carota HOM05D005225 ORTHO05D006830 3.1e-52 209.5 240 49.2
Psat2g131720 Pisum sativum HOM05D005225 ORTHO05D006830 3.1e-52 209.5 241 50.6
RcHm_v2.0_Chr7g0212391 Rosa chinensis HOM05D005225 ORTHO05D006830 5.3e-52 208.8 240 50.0
Hund25165 Selenicereus undatus HOM05D005225 ORTHO05D006830 5.3e-52 208.8 240 49.6
Potri.008G097400 Populus trichocarpa HOM05D005225 ORTHO05D006830 6.9e-52 208.4 240 49.6
ATR0827G107 Amborella trichopoda HOM05D005225 ORTHO05D006830 9.0e-52 208.0 243 48.6
Haze_11886 Corylus avellana HOM05D005225 ORTHO05D006830 9.0e-52 208.0 240 49.6
HanXRQChr03g0092011 Helianthus annuus HOM05D005225 ORTHO05D006830 9.0e-52 208.0 242 48.3
Ah.03g138790 Amaranthus hybridus HOM05D005225 ORTHO05D006830 1.2e-51 207.6 240 49.2
Cfa008863 Carpinus fangiana HOM05D005225 ORTHO05D006830 1.2e-51 207.6 240 48.8
EL10Ac6g15018 Beta vulgaris HOM05D005225 ORTHO05D006830 1.5e-51 207.2 240 50.0
CANSAT80G1664 Cannabis sativa HOM05D005225 ORTHO05D006830 1.5e-51 207.2 240 47.9
TPR.G23155 Trifolium pratense HOM05D005225 ORTHO05D006830 1.5e-51 207.2 241 50.2
TWI79G0826 Tripterygium wilfordii HOM05D005225 ORTHO05D006830 1.5e-51 207.2 240 47.9
QL03p073750 Quercus lobata HOM05D005225 ORTHO05D006830 2.0e-51 206.8 240 49.6
Medtr5g044980 Medicago truncatula HOM05D005225 ORTHO05D006830 2.6e-51 206.5 240 50.4
Dinv34052 Davidia involucrata HOM05D005225 ORTHO05D006830 3.4e-51 206.1 240 49.2
PGR102G0586 Punica granatum HOM05D005225 ORTHO05D006830 3.4e-51 206.1 240 47.9
Rhsim09G0126000 Rhododendron simsii HOM05D005225 ORTHO05D006830 3.4e-51 206.1 240 48.3
TAR629G1144 Trochodendron aralioides HOM05D005225 ORTHO05D006830 3.4e-51 206.1 202 54.5
CAN.G707.21 Capsicum annuum HOM05D005225 ORTHO05D006830 4.5e-51 205.7 240 48.8
CsaV3_5G008630 Cucumis sativus L. HOM05D005225 ORTHO05D006830 4.5e-51 205.7 241 49.0
MELO3C020077.2 Cucumis melo HOM05D005225 ORTHO05D006830 5.9e-51 205.3 241 49.4
Lsat_1_v5_gn_3_53701 Lactuca sativa HOM05D005225 ORTHO05D006830 5.9e-51 205.3 241 48.5
Prupe.1G566200 Prunus persica HOM05D005225 ORTHO05D006830 7.6e-51 204.9 240 48.3
CiPaw.06G093200 Carya illinoinensis HOM05D005225 ORTHO05D006830 1.0e-50 204.5 239 49.4
MD16G1281400 Malus domestica HOM05D005225 ORTHO05D006830 1.3e-50 204.1 240 47.5
Ciclev10031260m.g Citrus clementina HOM05D005225 ORTHO05D006830 1.7e-50 203.8 240 49.2
MBI16_g03095_MAGBIO Magnolia biondii HOM05D005225 ORTHO05D006830 1.7e-50 203.8 240 48.8
QL02p092646 Quercus lobata HOM05D005225 ORTHO05D006830 1.7e-50 203.8 240 48.3
CSS0003869 Camellia sinensis var. sinensis HOM05D005225 ORTHO05D006830 2.9e-50 203.0 240 47.9
Peaxi162Scf00175g00052 Petunia axillaris HOM05D005225 ORTHO05D006830 2.9e-50 203.0 240 48.3
Cc11_g11810 Coffea canephora HOM05D005225 ORTHO05D006830 3.8e-50 202.6 240 46.2
Sed0018680 Sechium edule HOM05D005225 ORTHO05D006830 3.8e-50 202.6 240 47.1
Lj2g0003273 Lotus japonicus HOM05D005225 ORTHO05D006830 5.0e-50 202.2 240 48.3
Nn8g41224 Nelumbo nucifera HOM05D005225 ORTHO05D006830 5.0e-50 202.2 240 47.9
Nitab4.5_0007734g0040 Nicotiana tabacum HOM05D005225 ORTHO05D006830 5.0e-50 202.2 240 48.3
Duzib251G0330 Durio zibethinus HOM05D005225 ORTHO05D006830 6.5e-50 201.8 240 47.5
FAN12G0824 Fragaria x ananassa HOM05D005225 ORTHO05D006830 6.5e-50 201.8 240 47.9
FAN12G2267 Fragaria x ananassa HOM05D005225 ORTHO05D006830 6.5e-50 201.8 240 47.9
Aqoxy6G03037 Aquilegia oxysepala HOM05D005225 ORTHO05D006830 8.4e-50 201.4 240 47.5
FvH4_4g10620 Fragaria vesca HOM05D005225 ORTHO05D006830 8.4e-50 201.4 240 47.5
Os07g0618500 Oryza sativa ssp. japonica HOM05D005225 ORTHO05D006830 8.4e-50 201.4 240 47.1
ClCG11G000950 Citrullus lanatus HOM05D005225 ORTHO05D006830 1.1e-49 201.1 241 47.7
Lj3P1029T28 Lonicera japonica HOM05D005225 ORTHO05D006830 1.4e-49 200.7 249 47.0
TPR.G23738 Trifolium pratense HOM05D005225 ORTHO05D006830 1.4e-49 200.7 241 49.8
Ca_05000_v3 Cicer arietinum L. HOM05D005225 ORTHO05D006830 3.2e-49 199.5 240 48.8
COL.COLO4_27858 Corchorus olitorius HOM05D005225 ORTHO05D006830 3.2e-49 199.5 241 47.7
ECA246G3793 Erigeron canadensis HOM05D005225 ORTHO05D006830 3.2e-49 199.5 240 48.3
Thecc.02G327800 Theobroma cacao HOM05D005225 ORTHO05D006830 3.2e-49 199.5 241 47.3
arahy.Tifrunner.gnm1.ann1.W47LMS Arachis hypogaea HOM05D005225 ORTHO05D006830 4.2e-49 199.1 240 47.9
Lalb_Chr04g0255551 Lupinus albus HOM05D005225 ORTHO05D006830 4.2e-49 199.1 241 48.5
Solyc05g012090.4 Solanum lycopersicum HOM05D005225 ORTHO05D006830 4.2e-49 199.1 240 47.5
VMungo1215G0332 Vigna mungo HOM05D005225 ORTHO05D006830 4.2e-49 199.1 241 47.7
Nitab4.5_0000231g0060 Nicotiana tabacum HOM05D005225 ORTHO05D006830 5.5e-49 198.7 240 47.1
TWI75G0045 Tripterygium wilfordii HOM05D005225 ORTHO05D006830 5.5e-49 198.7 240 46.7
vmacro01311 Vaccinium macrocarpon HOM05D005225 ORTHO05D006830 5.5e-49 198.7 240 47.5
Gorai.008G176100 Gossypium raimondii HOM05D005225 ORTHO05D006830 1.2e-48 197.6 240 47.5
Eucgr.F03034 Eucalyptus grandis HOM05D005225 ORTHO05D006830 1.6e-48 197.2 241 45.2
Lalb_Chr10g0098931 Lupinus albus HOM05D005225 ORTHO05D006830 2.1e-48 196.8 240 47.9
Atru.chr11.1603 Acer truncatum HOM05D005225 ORTHO05D006830 2.7e-48 196.4 240 47.9
Hma1.2p1_0051F.1_g029440 Hydrangea macrophylla HOM05D005225 ORTHO05D006830 2.7e-48 196.4 240 45.8
arahy.Tifrunner.gnm1.ann1.BYWX90 Arachis hypogaea HOM05D005225 ORTHO05D006830 4.6e-48 195.7 240 47.5
Zm00001eb319990 Zea mays HOM05D005225 ORTHO05D006830 4.6e-48 195.7 240 45.4
AL7G22240 Arabidopsis lyrata HOM05D005225 ORTHO05D006830 6.1e-48 195.3 240 47.5
arahy.Tifrunner.gnm1.ann1.BAL663 Arachis hypogaea HOM05D005225 ORTHO05D006830 7.9e-48 194.9 240 47.1
PGSC0003DMG400028362 Solanum tuberosum HOM05D005225 ORTHO05D006830 1.0e-47 194.5 240 47.1
MD06G1024100 Malus domestica HOM05D005225 ORTHO05D006830 1.3e-47 194.1 240 45.8
Sopen05g006880 Solanum pennellii HOM05D005225 ORTHO05D006830 1.3e-47 194.1 240 47.1
arahy.Tifrunner.gnm1.ann1.1IY8V2 Arachis hypogaea HOM05D005225 ORTHO05D006830 1.8e-47 193.7 240 47.1
HPP92_017786 Vanilla planifolia HOM05D005225 ORTHO05D006830 1.8e-47 193.7 241 46.1
AT4G30000 Arabidopsis thaliana HOM05D005225 ORTHO05D006830 2.3e-47 193.4 240 47.1
Carub.0007s1065 Capsella rubella HOM05D005225 ORTHO05D006830 8.7e-47 191.4 240 46.2
AT1G69190 Arabidopsis thaliana HOM05D005225 ORTHO05D006830 1.9e-46 190.3 244 43.9
Glyma.02G120400 Glycine max HOM05D005225 ORTHO05D006830 2.5e-46 189.9 243 46.1
Thhalv10024845m.g Eutrema salsugineum HOM05D005225 ORTHO05D006830 9.7e-46 188.0 240 46.2
THA.LOC104821999 Tarenaya hassleriana HOM05D005225 ORTHO05D006830 9.7e-46 188.0 241 48.1
Sp7g27800 Schrenkiella parvula HOM05D005225 ORTHO05D006830 1.6e-45 187.2 240 46.2
CARHR237920 Cardamine hirsuta HOM05D005225 ORTHO05D006830 2.8e-45 186.4 240 46.2
Aa31LG2G20560 Aethionema arabicum HOM05D005225 ORTHO05D006830 3.7e-45 186.0 240 44.6
Thhalv10019460m.g Eutrema salsugineum HOM05D005225 ORTHO05D006830 6.3e-45 185.3 242 44.6
A01p08120 Brassica napus HOM05D005225 ORTHO05D006830 1.1e-44 184.5 240 44.6
Sp5g24250 Schrenkiella parvula HOM05D005225 ORTHO05D006830 1.4e-44 184.1 242 43.8
BraA01t00759Z Brassica rapa HOM05D005225 ORTHO05D006830 1.8e-44 183.7 240 45.0
PSO017G1582 Papaver somniferum HOM05D005225 ORTHO05D006830 1.8e-44 183.7 240 45.4
AL2G28280 Arabidopsis lyrata HOM05D005225 ORTHO05D006830 2.4e-44 183.3 243 42.0
CDE04G0587 Ceratophyllum demersum HOM05D005225 ORTHO05D006830 2.4e-44 183.3 228 45.6
HanXRQChr04g0120931 Helianthus annuus HOM05D005225 ORTHO05D006830 3.1e-44 183.0 236 45.8
BcaC09g51778 Brassica carinata HOM05D005225 ORTHO05D006830 6.9e-44 181.8 240 44.2
C01p09090 Brassica napus HOM05D005225 ORTHO05D006830 6.9e-44 181.8 240 44.2
BolC1t00900H Brassica oleracea HOM05D005225 ORTHO05D006830 6.9e-44 181.8 240 44.2
SEGI_35565 Sequoiadendron giganteum HOM05D005225 ORTHO05D006830 6.9e-44 181.8 240 42.9
Oeu055095.2 Olea europaea HOM05D005225 ORTHO05D006830 1.2e-43 181.0 240 45.8
Actinidia00572 Actinidia chinensis HOM05D005225 ORTHO05D006830 1.5e-43 180.6 201 52.7
GSVIVG01012238001 Vitis vinifera HOM05D005225 ORTHO05D006830 2.6e-43 179.9 215 49.3
FAN17G1346 Fragaria x ananassa HOM05D005225 ORTHO05D006830 1.1e-41 174.5 219 45.7
SHI01330 Sapria himalayana HOM05D005225 ORTHO05D006830 3.2e-41 172.9 217 46.5
CSS0031076 Camellia sinensis var. sinensis HOM05D005225 ORTHO05D006830 7.2e-41 171.8 219 44.7
Aa31sc367G20 Aethionema arabicum HOM05D005225 ORTHO05D006830 1.6e-40 170.6 242 42.1
AUR62007898 Chenopodium quinoa HOM05D005225 ORTHO05D006830 1.0e-39 167.9 157 54.1
FAN07G1983 Fragaria x ananassa HOM05D005225 ORTHO05D006830 5.1e-39 165.6 157 54.8
Gohir.A12G160100 Gossypium hirsutum HOM05D005225 ORTHO05D006830 6.7e-39 165.2 234 44.0
AagrBONN_evm.TU.Sc2ySwM_362.716 Anthoceros agrestis HOM05D005225 ORTHO05D006830 6.3e-37 158.7 241 39.8
Gohir.D12G163500 Gossypium hirsutum HOM05D005225 ORTHO05D006830 6.3e-37 158.7 234 42.7
Nn2g15478 Nelumbo nucifera HOM05D005225 ORTHO05D006830 9.1e-36 154.8 137 56.2
RcHm_v2.0_Chr2g0139541 Rosa chinensis HOM05D005225 ORTHO05D006830 1.2e-35 154.5 129 59.7
Pp3c27_4310 Physcomitrium patens HOM05D005225 ORTHO05D006830 5.0e-34 149.1 259 39.8
Glyma.01G062200 Glycine max HOM05D005225 ORTHO05D006830 1.6e-32 144.1 160 49.4
Mapoly0021s0079 Marchantia polymorpha HOM05D005225 ORTHO05D006830 3.6e-32 142.9 243 37.0
Phvul.001G131450 Phaseolus vulgaris HOM05D005225 ORTHO05D006830 1.5e-30 137.5 110 60.9
Phvul.007G262101 Phaseolus vulgaris HOM05D005225 ORTHO05D006830 2.0e-30 137.1 110 60.9
SMO358G0268 Selaginella moellendorffii HOM05D005225 ORTHO05D006830 2.6e-30 136.7 243 36.2
SEGI_04122 Sequoiadendron giganteum HOM05D005225 ORTHO05D006830 1.3e-29 134.4 198 41.4
CBR_g61480 Chara braunii HOM05D005225 ORTHO05D006830 8.2e-21 105.1 209 35.9
Nn4g23481 Nelumbo nucifera HOM05D005225 ORTHO05D006830 1.1e-20 104.8 81 61.7
Actinidia16153 Actinidia chinensis HOM05D005225 ORTHO05D006830 2.0e-19 100.5 125 45.6
PRCOL_00003253 Prasinoderma coloniale HOM05D005225 ORTHO05D006830 1.4e-15 87.8 135 40.7
QL06p011620 Quercus lobata HOM05D005225 ORTHO05D006830 1.8e-12 77.4 60 61.7
MCO11G893 Micromonas commoda HOM05D005225 ORTHO05D006830 4.1e-12 76.3 143 35.7
TAR371G0727 Trochodendron aralioides HOM05D005225 ORTHO05D006830 1.2e-11 74.7 61 54.1
Cre10.g428550 Chlamydomonas reinhardtii HOM05D005225 ORTHO05D006830 1.6e-11 74.3 122 36.9
Nn4g23480 Nelumbo nucifera HOM05D005225 ORTHO05D006830 1.6e-11 74.3 122 40.2
LjContig00272g0016968 Lotus japonicus HOM05D005225 ORTHO05D006830 1.5e-06 57.8 70 42.9


User provided reference genes

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