Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07795 Striga asiatica HOM05D005523 ORTHO05D007089 0.0e+00 1256.5 617 100.0
Migut.L01183 Erythranthe guttata HOM05D005523 ORTHO05D007089 7.0e-249 864.0 655 68.1
SalBow2G2481 Salvia bowleyana HOM05D005523 ORTHO05D007089 8.3e-234 813.9 681 62.3
Oeu021803.1 Olea europaea HOM05D005523 ORTHO05D007089 3.9e-207 725.3 621 61.4
Cc11_g11910 Coffea canephora HOM05D005523 ORTHO05D007089 8.7e-207 724.2 674 57.0
Peaxi162Scf00175g00035 Petunia axillaris HOM05D005523 ORTHO05D007089 1.5e-206 723.4 658 58.7
PGSC0003DMG400028314 Solanum tuberosum HOM05D005523 ORTHO05D007089 6.9e-204 714.5 660 57.6
Solyc05g012200.3 Solanum lycopersicum HOM05D005523 ORTHO05D007089 7.6e-203 711.1 663 57.2
CAN.G707.6 Capsicum annuum HOM05D005523 ORTHO05D007089 5.4e-201 704.9 665 57.3
Nitab4.5_0007061g0020 Nicotiana tabacum HOM05D005523 ORTHO05D007089 5.4e-201 704.9 643 59.1
GSVIVG01012228001 Vitis vinifera HOM05D005523 ORTHO05D007089 1.5e-198 696.8 662 55.3
COL.COLO4_27873 Corchorus olitorius HOM05D005523 ORTHO05D007089 2.9e-194 682.6 653 55.4
Thecc.02G329500 Theobroma cacao HOM05D005523 ORTHO05D007089 4.9e-194 681.8 652 55.8
QL03p074443 Quercus lobata HOM05D005523 ORTHO05D007089 1.9e-193 679.9 686 53.6
CANSAT64G1787 Cannabis sativa HOM05D005523 ORTHO05D007089 2.7e-192 676.0 670 53.3
Nn4g23450 Nelumbo nucifera HOM05D005523 ORTHO05D007089 2.7e-192 676.0 714 52.1
PSO478G5042 Papaver somniferum HOM05D005523 ORTHO05D007089 2.7e-192 676.0 660 54.8
QL03p074024 Quercus lobata HOM05D005523 ORTHO05D007089 7.9e-192 674.5 686 53.2
TWI79G0260 Tripterygium wilfordii HOM05D005523 ORTHO05D007089 7.9e-192 674.5 665 52.5
Sed0024899 Sechium edule HOM05D005523 ORTHO05D007089 8.7e-191 671.0 661 53.4
Ciclev10033727m.g Citrus clementina HOM05D005523 ORTHO05D007089 2.5e-190 669.5 657 54.6
Psat7g133840 Pisum sativum HOM05D005523 ORTHO05D007089 5.6e-190 668.3 659 52.7
EL10Ac6g15006 Beta vulgaris HOM05D005523 ORTHO05D007089 1.6e-189 666.8 680 52.4
CiPaw.05G124500 Carya illinoinensis HOM05D005523 ORTHO05D007089 1.6e-189 666.8 686 51.7
Gohir.D12G164000 Gossypium hirsutum HOM05D005523 ORTHO05D007089 1.6e-189 666.8 651 55.3
PSO017G3752 Papaver somniferum HOM05D005523 ORTHO05D007089 2.1e-189 666.4 660 54.2
Gorai.008G176600 Gossypium raimondii HOM05D005523 ORTHO05D007089 6.2e-189 664.8 651 55.5
Atru.chr11.1618 Acer truncatum HOM05D005523 ORTHO05D007089 8.1e-189 664.5 654 54.1
Potri.010G157700 Populus trichocarpa HOM05D005523 ORTHO05D007089 1.1e-188 664.1 670 52.5
Glyma.20G025400 Glycine max HOM05D005523 ORTHO05D007089 3.1e-188 662.5 660 52.9
MD13G1061700 Malus domestica HOM05D005523 ORTHO05D007089 6.9e-188 661.4 680 53.8
MD16G1060200 Malus domestica HOM05D005523 ORTHO05D007089 4.5e-187 658.7 680 53.2
Lsat_1_v5_gn_4_11761 Lactuca sativa HOM05D005523 ORTHO05D007089 5.8e-187 658.3 656 54.3
Rhsim02G0238300 Rhododendron simsii HOM05D005523 ORTHO05D007089 5.8e-187 658.3 721 49.8
CsaV3_5G033360 Cucumis sativus L. HOM05D005523 ORTHO05D007089 1.0e-186 657.5 676 52.1
Sopen05g007030 Solanum pennellii HOM05D005523 ORTHO05D007089 1.0e-186 657.5 558 60.6
Lalb_Chr05g0219911 Lupinus albus HOM05D005523 ORTHO05D007089 1.1e-185 654.1 673 52.5
Lj4g0005251 Lotus japonicus HOM05D005523 ORTHO05D007089 2.5e-185 652.9 662 53.2
arahy.Tifrunner.gnm1.ann1.5T11RT Arachis hypogaea HOM05D005523 ORTHO05D007089 3.2e-185 652.5 667 52.9
HanXRQChr17g0552771 Helianthus annuus HOM05D005523 ORTHO05D007089 3.2e-185 652.5 663 53.8
arahy.Tifrunner.gnm1.ann1.1A68HA Arachis hypogaea HOM05D005523 ORTHO05D007089 4.2e-185 652.1 660 53.9
ECA234G2689 Erigeron canadensis HOM05D005523 ORTHO05D007089 4.2e-185 652.1 659 54.3
Duzib251G0966 Durio zibethinus HOM05D005523 ORTHO05D007089 5.5e-185 651.7 640 55.5
Cc03_g11190 Coffea canephora HOM05D005523 ORTHO05D007089 7.1e-185 651.4 539 60.9
MELO3C012156.2 Cucumis melo HOM05D005523 ORTHO05D007089 1.6e-184 650.2 679 50.8
Medtr4g083180 Medicago truncatula HOM05D005523 ORTHO05D007089 1.0e-183 647.5 656 52.6
DCAR_026677 Daucus carota HOM05D005523 ORTHO05D007089 1.8e-183 646.7 626 55.4
Aqoxy3G00520 Aquilegia oxysepala HOM05D005523 ORTHO05D007089 5.1e-183 645.2 707 50.1
AUR62003091 Chenopodium quinoa HOM05D005523 ORTHO05D007089 6.7e-183 644.8 644 53.6
FvH4_4g29880 Fragaria vesca HOM05D005523 ORTHO05D007089 1.1e-182 644.0 656 52.6
Prupe.1G288300 Prunus persica HOM05D005523 ORTHO05D007089 1.5e-182 643.7 683 52.4
RcHm_v2.0_Chr4g0438141 Rosa chinensis HOM05D005523 ORTHO05D007089 1.5e-182 643.7 667 52.9
Ca_18798_v3 Cicer arietinum L. HOM05D005523 ORTHO05D007089 2.5e-182 642.9 629 52.8
Phvul.002G101900 Phaseolus vulgaris HOM05D005523 ORTHO05D007089 2.5e-182 642.9 661 51.3
TPR.G34024 Trifolium pratense HOM05D005523 ORTHO05D007089 1.3e-181 640.6 658 52.6
FAN07G2138 Fragaria x ananassa HOM05D005523 ORTHO05D007089 2.0e-179 633.3 661 52.0
FAN12G2921 Fragaria x ananassa HOM05D005523 ORTHO05D007089 4.5e-179 632.1 692 50.6
FAN22G0589 Fragaria x ananassa HOM05D005523 ORTHO05D007089 1.0e-178 630.9 661 51.7
Haze_11899 Corylus avellana HOM05D005523 ORTHO05D007089 6.5e-178 628.2 643 52.7
FAN17G1793 Fragaria x ananassa HOM05D005523 ORTHO05D007089 2.7e-176 622.9 683 50.4
Nitab4.5_0000231g0170 Nicotiana tabacum HOM05D005523 ORTHO05D007089 2.7e-176 622.9 663 54.8
Cfa008872 Carpinus fangiana HOM05D005523 ORTHO05D007089 1.8e-175 620.2 652 51.2
Thhalv10003838m.g Eutrema salsugineum HOM05D005523 ORTHO05D007089 2.3e-175 619.8 650 51.7
THA.LOC104805203 Tarenaya hassleriana HOM05D005523 ORTHO05D007089 6.7e-175 618.2 662 52.0
BolC7t43916H Brassica oleracea HOM05D005523 ORTHO05D007089 1.5e-174 617.1 657 50.5
C07p34020 Brassica napus HOM05D005523 ORTHO05D007089 3.3e-174 615.9 657 50.2
Carub.0005s0279 Capsella rubella HOM05D005523 ORTHO05D007089 7.4e-174 614.8 650 51.7
AL5G13440 Arabidopsis lyrata HOM05D005523 ORTHO05D007089 3.7e-173 612.5 650 51.7
Hund25171 Selenicereus undatus HOM05D005523 ORTHO05D007089 3.7e-173 612.5 672 51.0
AT2G03667 Arabidopsis thaliana HOM05D005523 ORTHO05D007089 1.4e-172 610.5 651 52.5
A06p43010 Brassica napus HOM05D005523 ORTHO05D007089 1.4e-172 610.5 657 50.7
vmacro10430 Vaccinium macrocarpon HOM05D005523 ORTHO05D007089 1.4e-172 610.5 673 50.1
Sp2g14490 Schrenkiella parvula HOM05D005523 ORTHO05D007089 1.8e-172 610.1 655 51.1
CARHR145990 Cardamine hirsuta HOM05D005523 ORTHO05D007089 1.2e-171 607.4 651 51.0
Rhsim09G0126700 Rhododendron simsii HOM05D005523 ORTHO05D007089 1.5e-171 607.1 655 50.7
Lj6A778G61 Lonicera japonica HOM05D005523 ORTHO05D007089 1.3e-170 604.0 724 48.6
Manes.05G109800 Manihot esculenta HOM05D005523 ORTHO05D007089 2.3e-167 593.2 636 49.8
Sc14g0007970 Simmondsia chinensis HOM05D005523 ORTHO05D007089 1.5e-166 590.5 597 52.3
Aa31LG2G7010 Aethionema arabicum HOM05D005523 ORTHO05D007089 2.0e-166 590.1 637 51.0
AUR62007908 Chenopodium quinoa HOM05D005523 ORTHO05D007089 9.7e-166 587.8 639 50.7
HPP92_001825 Vanilla planifolia HOM05D005523 ORTHO05D007089 5.9e-163 578.6 636 50.2
unitig_26.g10286 Utricularia gibba HOM05D005523 ORTHO05D007089 1.0e-159 567.8 656 51.2
PGR119G1690 Punica granatum HOM05D005523 ORTHO05D007089 2.0e-158 563.5 654 48.8
BcaB07g30661 Brassica carinata HOM05D005523 ORTHO05D007089 1.2e-155 554.3 667 47.7
Oeu021804.1 Olea europaea HOM05D005523 ORTHO05D007089 9.4e-153 544.7 464 60.8
Zm00001eb029510 Zea mays HOM05D005523 ORTHO05D007089 1.7e-146 523.9 551 53.0
Pp3c13_5080 Physcomitrium patens HOM05D005523 ORTHO05D007089 1.3e-141 507.7 685 43.2
AagrBONN_evm.TU.Sc2ySwM_228.676 Anthoceros agrestis HOM05D005523 ORTHO05D007089 5.4e-132 475.7 654 43.9
CSS0034602 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 1.1e-129 468.0 420 57.6
MBI19_g25293_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 2.2e-125 453.8 638 42.8
SMO364G0955 Selaginella moellendorffii HOM05D005523 ORTHO05D007089 6.4e-125 452.2 607 42.7
TAR374G1461 Trochodendron aralioides HOM05D005523 ORTHO05D007089 6.4e-125 452.2 439 55.8
Eucgr.G02442 Eucalyptus grandis HOM05D005523 ORTHO05D007089 1.2e-120 438.0 432 55.1
Gohir.A12G160700 Gossypium hirsutum HOM05D005523 ORTHO05D007089 1.1e-111 408.3 391 56.8
ATR0177G042 Amborella trichopoda HOM05D005523 ORTHO05D007089 7.8e-107 392.1 560 42.1
ClCG05G023660 Citrullus lanatus HOM05D005523 ORTHO05D007089 2.1e-99 367.5 470 44.0
Mapoly0013s0146 Marchantia polymorpha HOM05D005523 ORTHO05D007089 3.5e-99 366.7 501 42.7
Actinidia28650 Actinidia chinensis HOM05D005523 ORTHO05D007089 2.8e-96 357.1 449 45.9
VMungo0251G0731 Vigna mungo HOM05D005523 ORTHO05D007089 3.8e-93 346.7 286 61.9
VMungo0251G1186 Vigna mungo HOM05D005523 ORTHO05D007089 4.5e-78 296.6 390 43.1
Actinidia36738 Actinidia chinensis HOM05D005523 ORTHO05D007089 5.8e-70 269.6 251 58.6
CDE10G0904 Ceratophyllum demersum HOM05D005523 ORTHO05D007089 7.4e-65 252.7 256 55.1
PRCOL_00003408 Prasinoderma coloniale HOM05D005523 ORTHO05D007089 7.4e-65 252.7 568 31.0
CDE10G0400 Ceratophyllum demersum HOM05D005523 ORTHO05D007089 2.4e-63 247.7 348 42.5
MBI19_g44450_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 2.4e-63 247.7 248 56.5
Actinidia14169 Actinidia chinensis HOM05D005523 ORTHO05D007089 7.4e-57 226.1 156 69.9
CBR_g50115 Chara braunii HOM05D005523 ORTHO05D007089 1.6e-56 224.9 552 30.6
BcaC06g31164 Brassica carinata HOM05D005523 ORTHO05D006344 2.8e-56 224.2 193 61.1
Lsat_1_v5_gn_5_143020 Lactuca sativa HOM05D005523 ORTHO05D007089 5.9e-54 216.5 146 76.0
BcaC04g21469 Brassica carinata HOM05D000070 ORTHO05D006344 2.9e-53 214.2 346 41.3
BcaB03g12091 Brassica carinata HOM05D005523 ORTHO05D007089 2.8e-48 197.6 128 72.7
Lsat_1_v5_gn_7_112061 Lactuca sativa HOM05D005523 ORTHO05D007089 8.2e-48 196.1 312 42.9
Cpa.g.sc1.132 Carica papaya HOM05D005523 ORTHO05D007089 1.8e-47 194.9 459 30.9
Lsat_1_v5_gn_5_70240 Lactuca sativa HOM05D005523 ORTHO05D007089 2.4e-47 194.5 179 60.9
Actinidia12916 Actinidia chinensis HOM05D005523 ORTHO05D007089 5.3e-47 193.4 633 28.9
Cre07.g321050 Chlamydomonas reinhardtii HOM05D005523 ORTHO05D007089 7.7e-46 189.5 363 34.4
RcHm_v2.0_Chr7g0182531 Rosa chinensis HOM05D005523 ORTHO05D007089 1.3e-45 188.7 178 59.0
BolC9t56002H Brassica oleracea HOM05D005523 ORTHO05D007089 6.1e-43 179.9 237 45.6
C09p31430 Brassica napus HOM05D000070 ORTHO05D006344 2.3e-42 177.9 237 45.6
Cpa.g.sc1.134 Carica papaya HOM05D005523 ORTHO05D007089 2.3e-42 177.9 119 72.3
CSS0024141 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 4.5e-38 163.7 201 44.3
TAR374G1311 Trochodendron aralioides HOM05D005523 ORTHO05D007089 7.2e-36 156.4 210 43.3
Os12g0574900 Oryza sativa ssp. japonica HOM05D005523 ORTHO05D007089 2.0e-33 148.3 227 39.6
CSS0004547 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 8.2e-32 142.9 106 62.3
CSS0023178 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 4.2e-28 130.6 106 57.5
SEGI_10872 Sequoiadendron giganteum HOM05D005523 ORTHO05D007089 1.5e-25 122.1 98 57.1
EL10Ac6g15009 Beta vulgaris HOM05D005523 ORTHO05D007089 2.2e-21 108.2 210 33.3
CSS0028074 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D026295 1.1e-20 105.9 106 49.1
HanXRQChr15g0470871 Helianthus annuus HOM05D005523 ORTHO05D007089 2.7e-19 101.3 78 59.0
CAN.G553.8 Capsicum annuum HOM05D001766 ORTHO05D043404 6.3e-16 90.1 83 51.8
Cpa.g.sc1.135 Carica papaya HOM05D005523 ORTHO05D007089 4.5e-14 84.0 57 77.2
CAN.G602.9 Capsicum annuum HOM05D005523 ORTHO05D007089 1.1e-12 79.3 49 75.5
Lsat_1_v5_gn_7_82480 Lactuca sativa HOM05D005523 ORTHO05D007089 1.4e-10 72.4 103 47.6
CiPaw.04G124200 Carya illinoinensis HOM05D005523 ORTHO05D007089 1.3e-08 65.9 72 41.7
HanXRQChr16g0520621 Helianthus annuus HOM05D005523 ORTHO05D007089 1.7e-08 65.5 37 73.0


User provided reference genes

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